PDB Chemical Component XUL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XUL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.608 1.506
C1 O1 1.455 1.428
C1 H11 1.115 1.090
C1 H12 1.115 1.090
C2 C3 1.515 1.506
C2 O2 1.260 1.207
C3 C4 1.527 1.529
C3 O3 1.439 1.430
C3 H3 1.116 1.090
C4 C5 1.546 1.529
C4 O4 1.402 1.429
C4 H4 1.115 1.090
C5 O5 1.438 1.429
C5 H51 1.115 1.089
C5 H52 1.115 1.090
O1 HO1 0.950 0.967
O3 HO3 0.951 0.965
O4 HO4 0.951 0.967
O5 HO5 0.950 0.966

Bond Angles for XUL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 104.9 109.5
C2 C1 H11 113.9 109.4
C2 C1 H12 113.9 109.5
C1 C2 C3 115.1 120.0
C1 C2 O2 123.4 120.0
O1 C1 H11 114.0 109.4
O1 C1 H12 113.9 109.5
C1 O1 HO1 104.9 106.9
H11 C1 H12 96.5 109.5
C3 C2 O2 121.1 120.0
C2 C3 C4 110.5 109.5
C2 C3 O3 107.9 109.5
C2 C3 H3 110.2 109.5
C4 C3 O3 110.5 109.4
C4 C3 H3 107.5 109.4
C3 C4 C5 110.2 109.6
C3 C4 O4 113.6 109.5
C3 C4 H4 104.3 109.5
O3 C3 H3 110.2 109.5
C3 O3 HO3 107.8 106.8
C5 C4 O4 103.2 109.4
C5 C4 H4 114.5 109.4
C4 C5 O5 111.1 109.6
C4 C5 H51 111.6 109.5
C4 C5 H52 111.6 109.5
O4 C4 H4 111.3 109.4
C4 O4 HO4 113.5 106.8
O5 C5 H51 111.6 109.4
O5 C5 H52 111.5 109.5
C5 O5 HO5 111.1 106.9
H51 C5 H52 98.8 109.4

Torsion Angles for XUL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 H11 234.7 240.1
O1 C1 C2 H12 125.3 120.1
C2 C1 O1 HO1 180.0 180.0
H11 C1 C2 H12 250.6 240.0
C3 C2 C1 O2 172.9 180.1
C1 C2 C3 C4 219.0 270.0
C1 C2 C3 O3 98.1 150.0
C1 C2 C3 H3 337.7 30.0
C2 C1 O1 H11 125.3 119.9
C2 C1 O1 H12 234.7 240.0
O1 C1 C2 C3 176.8 180.1
O1 C1 C2 O2 3.9 0.0
H11 C1 O1 H12 109.5 120.0
C2 C1 H11 O1 239.6 240.0
C2 C1 H11 H12 119.8 120.0
H11 C1 C2 C3 302.1 300.0
H11 C1 C2 O2 129.2 119.9
O1 C1 H11 H12 240.2 240.0
H11 C1 O1 HO1 54.7 60.1
C2 C1 H12 O1 120.3 120.1
C2 C1 H12 H11 240.2 240.0
H12 C1 C2 C3 51.5 60.0
H12 C1 C2 O2 238.6 239.9
O1 C1 H12 H11 119.9 120.0
H12 C1 O1 HO1 305.3 300.0
C3 C2 C1 O1 176.8 180.1
C3 C2 C1 H11 302.1 300.0
C3 C2 C1 H12 51.5 60.0
C1 C2 C3 O2 186.9 179.9
C4 C3 C2 O3 120.9 119.9
C4 C3 C2 H3 241.3 240.0
C2 C3 C4 C5 170.1 180.0
C2 C3 C4 O4 285.3 300.1
C2 C3 C4 H4 46.7 60.0
O3 C3 C2 H3 120.4 120.0
C2 C3 O3 HO3 180.0 59.9
O2 C2 C1 O1 3.9 0.0
O2 C2 C1 H11 129.2 119.9
O2 C2 C1 H12 238.6 239.9
C1 C2 O2 C3 172.5 180.1
O2 C2 C3 C4 32.0 90.0
O2 C2 C3 O3 271.1 330.1
O2 C2 C3 H3 150.8 210.0
C4 C3 C2 O2 32.0 90.0
C2 C3 C4 O3 240.7 240.0
C2 C3 C4 H3 120.3 120.1
O3 C3 C4 H3 239.7 240.0
C4 C3 O3 HO3 59.0 299.9
C5 C4 C3 O4 244.8 240.0
C5 C4 C3 H4 123.4 120.0
C3 C4 C5 O5 301.3 180.0
C3 C4 C5 H51 66.6 60.0
C3 C4 C5 H52 176.1 300.1
O4 C4 C3 H4 238.6 240.1
C3 C4 O4 HO4 180.0 299.9
O3 C3 C2 O2 271.1 330.1
C2 C3 O3 C4 120.9 120.0
C2 C3 O3 H3 239.6 239.9
C4 C3 O3 H3 118.7 119.9
O3 C3 C4 C5 289.4 300.0
O3 C3 C4 O4 44.7 60.0
O3 C3 C4 H4 166.0 180.0
H3 C3 C2 O2 150.8 210.0
C2 C3 H3 C4 239.4 240.0
C2 C3 H3 O3 119.0 120.0
C4 C3 H3 O3 239.5 240.1
H3 C3 C4 C5 49.7 60.0
H3 C3 C4 O4 165.0 180.0
H3 C3 C4 H4 286.4 299.9
H3 C3 O3 HO3 300.3 180.0
C5 C4 C3 O3 289.4 300.0
C5 C4 C3 H3 49.7 60.0
C3 C4 C5 O4 121.6 120.1
C3 C4 C5 H4 242.7 239.9
O4 C4 C5 H4 121.1 119.9
C5 C4 O4 HO4 299.4 60.1
O5 C5 C4 H51 234.8 120.0
O5 C5 C4 H52 125.2 240.0
C4 C5 O5 HO5 180.0 180.0
H51 C5 C4 H52 250.4 119.9
O4 C4 C3 O3 44.7 60.0
O4 C4 C3 H3 165.0 180.0
C3 C4 O4 C5 240.6 239.9
C3 C4 O4 H4 117.4 120.0
C5 C4 O4 H4 236.8 240.1
O4 C4 C5 O5 179.7 60.0
O4 C4 C5 H51 304.9 299.9
O4 C4 C5 H52 54.5 180.0
H4 C4 C3 O3 166.0 180.0
H4 C4 C3 H3 286.4 299.9
C3 C4 H4 C5 120.6 120.1
C3 C4 H4 O4 237.1 240.0
C5 C4 H4 O4 116.5 119.9
H4 C4 C5 O5 58.6 300.1
H4 C4 C5 H51 183.8 180.1
H4 C4 C5 H52 293.4 60.2
H4 C4 O4 HO4 62.6 179.9
O5 C5 C4 O4 179.7 60.0
O5 C5 C4 H4 58.6 300.1
C4 C5 O5 H51 125.3 239.9
C4 C5 O5 H52 234.7 120.1
H51 C5 O5 H52 109.5 240.1
H51 C5 C4 O4 304.9 299.9
H51 C5 C4 H4 183.8 180.1
C4 C5 H51 O5 235.0 120.1
C4 C5 H51 H52 117.6 240.0
O5 C5 H51 H52 242.6 119.9
H51 C5 O5 HO5 54.7 300.0
H52 C5 C4 O4 54.5 180.0
H52 C5 C4 H4 293.4 60.2
C4 C5 H52 O5 125.0 239.9
C4 C5 H52 H51 242.4 120.0
O5 C5 H52 H51 117.5 240.1
H52 C5 O5 HO5 305.3 59.9
HO1 O1 C1 H11 54.7 60.1
HO1 O1 C1 H12 305.3 300.0
HO3 O3 C3 H3 300.3 180.0
HO4 O4 C4 H4 62.6 179.9
HO5 O5 C5 H51 54.7 300.0
HO5 O5 C5 H52 305.3 59.9