PDB Chemical Component XLS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for XLS

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.524	1.506
C1	O1	1.400	1.208
C1	H1	1.104	1.080
C2	C3	1.528	1.529
C2	O2	1.424	1.429
C2	H2	1.114	1.090
C3	C4	1.521	1.529
C3	O3	1.442	1.428
C3	H3	1.115	1.090
C4	C5	1.525	1.529
C4	O4	1.427	1.429
C4	H4	1.114	1.091
C5	O5	1.384	1.429
C5	H51	1.116	1.089
C5	H52	1.115	1.090
O2	HO2	0.950	0.967
O3	HO3	0.950	0.966
O4	HO4	0.949	0.967
O5	HO5	0.950	0.967

Bond Angles for XLS

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	113.9	120.0
C2	C1	H1	126.8	120.0
C1	C2	C3	110.9	109.5
C1	C2	O2	118.0	109.5
C1	C2	H2	103.7	109.5
O1	C1	H1	119.3	120.0
C3	C2	O2	113.8	109.4
C3	C2	H2	109.0	109.5
C2	C3	C4	111.3	109.5
C2	C3	O3	108.0	109.5
C2	C3	H3	108.7	109.4
O2	C2	H2	99.9	109.4
C2	O2	HO2	118.0	106.8
C4	C3	O3	107.9	109.5
C4	C3	H3	108.9	109.5
C3	C4	C5	108.4	109.5
C3	C4	O4	107.9	109.5
C3	C4	H4	110.1	109.4
O3	C3	H3	112.0	109.4
C3	O3	HO3	108.1	106.8
C5	C4	O4	106.2	109.5
C5	C4	H4	111.8	109.5
C4	C5	O5	113.8	109.5
C4	C5	H51	110.6	109.5
C4	C5	H52	110.6	109.5
O4	C4	H4	112.3	109.4
C4	O4	HO4	107.9	106.7
O5	C5	H51	110.6	109.5
O5	C5	H52	110.6	109.4
C5	O5	HO5	113.8	106.8
H51	C5	H52	99.7	109.5

Torsion Angles for XLS

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	H1	180.1	180.0
C3	C2	C1	O2	226.1	240.0
C3	C2	C1	H2	116.9	120.1
C1	C2	C3	C4	221.2	180.0
C1	C2	C3	O3	102.9	59.9
C1	C2	C3	H3	341.1	300.0
O2	C2	C1	H2	250.8	240.1
C1	C2	O2	HO2	180.1	300.0
C2	C1	O1	H1	180.0	180.0
O1	C1	C2	C3	178.9	120.0
O1	C1	C2	O2	312.8	240.0
O1	C1	C2	H2	62.1	360.0
C2	C1	H1	O1	180.1	180.0
H1	C1	C2	C3	358.9	300.0
H1	C1	C2	O2	132.8	60.0
H1	C1	C2	H2	242.0	180.0
C3	C2	C1	O1	178.9	120.0
C3	C2	C1	H1	358.9	300.0
C1	C2	C3	O2	136.0	120.0
C1	C2	C3	H2	246.5	239.9
O2	C2	C3	H2	110.5	119.9
C3	C2	O2	HO2	312.7	60.0
C4	C3	C2	O3	118.3	120.0
C4	C3	C2	H3	240.1	240.0
C2	C3	C4	C5	160.0	180.0
C2	C3	C4	O4	274.6	300.0
C2	C3	C4	H4	37.5	60.0
O3	C3	C2	H3	121.8	119.9
C2	C3	O3	HO3	180.0	60.1
O2	C2	C1	O1	312.8	240.0
O2	C2	C1	H1	132.8	60.0
C1	C2	O2	C3	227.4	239.9
C1	C2	O2	H2	111.4	120.0
C3	C2	O2	H2	244.0	240.0
O2	C2	C3	C4	85.2	60.0
O2	C2	C3	O3	326.9	299.9
O2	C2	C3	H3	205.1	180.0
H2	C2	C1	O1	62.1	360.0
H2	C2	C1	H1	242.0	180.0
C1	C2	H2	C3	118.2	120.1
C1	C2	H2	O2	237.8	240.0
C3	C2	H2	O2	119.6	119.9
H2	C2	C3	C4	334.7	300.0
H2	C2	C3	O3	216.4	180.0
H2	C2	C3	H3	94.6	60.1
H2	C2	O2	HO2	68.7	180.0
C4	C3	C2	O2	85.2	60.0
C4	C3	C2	H2	334.7	300.0
C2	C3	C4	O3	241.6	240.0
C2	C3	C4	H3	119.8	120.0
O3	C3	C4	H3	238.2	240.0
C4	C3	O3	HO3	59.6	300.0
C5	C4	C3	O4	245.4	239.9
C5	C4	C3	H4	122.6	120.0
C3	C4	C5	O5	256.0	180.0
C3	C4	C5	H51	21.2	60.0
C3	C4	C5	H52	130.7	300.0
O4	C4	C3	H4	237.2	240.0
C3	C4	O4	HO4	180.0	299.9
O3	C3	C2	O2	326.9	299.9
O3	C3	C2	H2	216.4	180.0
C2	C3	O3	C4	120.4	120.1
C2	C3	O3	H3	240.3	240.1
C4	C3	O3	H3	119.8	120.0
O3	C3	C4	C5	278.4	300.0
O3	C3	C4	O4	33.0	60.1
O3	C3	C4	H4	155.8	180.0
H3	C3	C2	O2	205.1	180.0
H3	C3	C2	H2	94.6	60.1
C2	C3	H3	C4	238.6	239.9
C2	C3	H3	O3	119.3	120.0
C4	C3	H3	O3	240.8	240.0
H3	C3	C4	C5	40.2	60.0
H3	C3	C4	O4	154.8	180.0
H3	C3	C4	H4	277.6	300.0
H3	C3	O3	HO3	299.8	180.0
C5	C4	C3	O3	278.4	300.0
C5	C4	C3	H3	40.2	60.0
C3	C4	C5	O4	115.7	120.0
C3	C4	C5	H4	238.4	240.0
O4	C4	C5	H4	122.7	120.0
C5	C4	O4	HO4	296.1	59.9
O5	C5	C4	H51	234.7	120.0
O5	C5	C4	H52	125.3	240.0
C4	C5	O5	HO5	180.0	180.0
H51	C5	C4	H52	250.5	120.0
O4	C4	C3	O3	33.0	60.1
O4	C4	C3	H3	154.8	180.0
C3	C4	O4	C5	243.9	240.0
C3	C4	O4	H4	121.5	120.0
C5	C4	O4	H4	237.6	240.0
O4	C4	C5	O5	140.2	60.0
O4	C4	C5	H51	265.5	300.0
O4	C4	C5	H52	15.0	180.0
H4	C4	C3	O3	155.8	180.0
H4	C4	C3	H3	277.6	300.0
C3	C4	H4	C5	120.6	120.0
C3	C4	H4	O4	239.8	240.0
C5	C4	H4	O4	119.2	120.0
H4	C4	C5	O5	17.5	300.0
H4	C4	C5	H51	142.8	180.0
H4	C4	C5	H52	252.2	60.0
H4	C4	O4	HO4	58.5	179.9
O5	C5	C4	O4	140.2	60.0
O5	C5	C4	H4	17.5	300.0
C4	C5	O5	H51	125.3	240.0
C4	C5	O5	H52	234.7	120.0
H51	C5	O5	H52	109.4	240.0
H51	C5	C4	O4	265.5	300.0
H51	C5	C4	H4	142.8	180.0
C4	C5	H51	O5	232.9	120.0
C4	C5	H51	H52	116.5	240.0
O5	C5	H51	H52	243.5	120.0
H51	C5	O5	HO5	54.7	300.0
H52	C5	C4	O4	15.0	180.0
H52	C5	C4	H4	252.2	60.0
C4	C5	H52	O5	127.1	240.0
C4	C5	H52	H51	243.5	120.0
O5	C5	H52	H51	116.4	240.0
H52	C5	O5	HO5	305.3	60.1
HO2	O2	C2	H2	68.7	180.0
HO3	O3	C3	H3	299.8	180.0
HO4	O4	C4	H4	58.5	179.9
HO5	O5	C5	H51	54.7	300.0
HO5	O5	C5	H52	305.3	60.1