PDB Chemical Component UTP

Ideal Model

Chemical Description

Name URIDINE 5'-TRIPHOSPHATE
Formula C9 H15 N2 O15 P3
Formal charge 0
Molecular weight 484.141 g/mol
Component type NON-POLYMER

Chemical features

Atom count 44
Chiral atom count 6
Chiral atoms PA PB C4' C1' C2' C3'
Bond count 45
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) uridine 5'-(tetrahydrogen triphosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl (hydroxy-phosphonooxy-phosphoryl) hydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P@](O)(=O)O[P@](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
SMILES (CACTVS) O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
Stereo SMILES (OpenEye) C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)O[P@@](=O)(O)OP(=O)(O)O)O)O
InChI descriptor InChI=1S/C9H15N2O15P3/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey descriptor PGAVKCOVUIYSFO-XVFCMESISA-N

Status Information

Last modified 2011-06-04
Created 2002-03-27
Release status REL
Model PDB code 1GX6
Processing site RCSB