PDB Chemical Component URP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for URP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O2	C2	1.211	1.216
C2	N3	1.327	1.348
C2	N1	1.332	1.348
N3	HN31	1.000	0.969
N3	HN32	1.000	0.970
N1	C6	1.455	1.466
N1	HN1	1.000	0.970
C6	C5	1.527	1.530
C6	H61	1.100	1.090
C6	H62	1.100	1.090
C5	C4	1.516	1.508
C5	H51	1.100	1.090
C5	H52	1.100	1.090
C4	O42	1.256	1.342
C4	O41	1.253	1.208
O42	H42	0.950	0.967

Bond Angles for URP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C2	N3	120.0	120.0
O2	C2	N1	120.6	120.0
N3	C2	N1	119.4	120.0
C2	N3	HN31	123.7	119.9
C2	N3	HN32	112.6	120.0
C2	N1	C6	128.5	120.0
C2	N1	HN1	115.7	120.1
HN31	N3	HN32	123.7	120.1
C6	N1	HN1	115.8	120.0
N1	C6	C5	102.6	109.4
N1	C6	H61	113.2	109.5
N1	C6	H62	111.8	109.5
C5	C6	H61	113.3	109.5
C5	C6	H62	111.8	109.5
C6	C5	C4	111.4	109.5
C6	C5	H51	108.4	109.5
C6	C5	H52	108.8	109.5
H61	C6	H62	104.3	109.5
C4	C5	H51	108.4	109.4
C4	C5	H52	108.9	109.4
C5	C4	O42	118.1	120.0
C5	C4	O41	119.4	120.0
H51	C5	H52	111.0	109.5
O42	C4	O41	122.4	120.0
C4	O42	H42	109.5	120.0

Torsion Angles for URP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N3	C2	O2	N1	179.7	180.0
O2	C2	N3	HN31	180.1	360.0
O2	C2	N3	HN32	0.2	179.7
O2	C2	N1	C6	179.0	-0.0
O2	C2	N1	HN1	359.0	180.0
O2	C2	N3	N1	180.3	180.0
N3	C2	N1	C6	359.3	180.0
N3	C2	N1	HN1	179.3	-0.0
HN31	N3	C2	HN32	180.0	180.3
O2	C2	N1	N3	179.7	180.0
N1	C2	N3	HN31	359.8	180.0
N1	C2	N3	HN32	179.9	359.7
C6	N1	C2	HN1	180.0	180.0
C2	N1	C6	C5	270.9	180.0
C2	N1	C6	H61	148.4	300.0
C2	N1	C6	H62	30.9	60.0
HN31	N3	C2	N1	359.8	180.0
C2	N3	HN31	HN32	180.0	179.7
HN32	N3	C2	N1	179.9	359.7
C2	N3	HN32	HN31	180.0	180.3
C2	N1	C6	HN1	180.0	180.0
C5	C6	N1	H61	122.5	240.0
C5	C6	N1	H62	240.0	120.0
N1	C6	C5	C4	106.7	180.0
N1	C6	C5	H51	347.5	300.0
N1	C6	C5	H52	226.7	60.0
H61	C6	N1	H62	117.5	240.0
C2	N1	HN1	C6	180.0	180.0
HN1	N1	C6	C5	90.9	-0.0
HN1	N1	C6	H61	328.4	120.0
HN1	N1	C6	H62	210.9	240.0
C5	C6	N1	HN1	90.9	-0.0
N1	C6	C5	H61	237.5	120.0
N1	C6	C5	H62	120.0	240.0
H61	C6	C5	H62	242.5	120.0
C4	C5	C6	H51	119.2	240.0
C4	C5	C6	H52	240.0	120.0
C6	C5	C4	O42	103.1	180.0
C6	C5	C4	O41	281.9	-0.0
H51	C5	C6	H52	120.8	239.9
H61	C6	N1	HN1	328.4	120.0
N1	C6	H61	C5	116.3	240.0
N1	C6	H61	H62	238.2	120.0
C5	C6	H61	H62	121.8	240.0
H61	C6	C5	C4	229.1	60.0
H61	C6	C5	H51	109.9	180.0
H61	C6	C5	H52	349.1	300.0
H62	C6	N1	HN1	210.9	240.0
N1	C6	H62	C5	245.5	120.0
N1	C6	H62	H61	122.8	240.0
C5	C6	H62	H61	237.2	120.0
H62	C6	C5	C4	346.7	300.0
H62	C6	C5	H51	227.5	60.0
H62	C6	C5	H52	106.7	180.0
C4	C5	C6	H61	229.1	60.0
C4	C5	C6	H62	346.7	300.0
C6	C5	C4	H51	240.8	120.0
C6	C5	C4	H52	120.0	240.0
H51	C5	C4	H52	239.2	120.0
O42	C4	C5	O41	181.2	180.0
C5	C4	O42	H42	178.7	180.0
H51	C5	C6	H61	109.9	180.0
H51	C5	C6	H62	227.5	60.0
C6	C5	H51	C4	121.1	240.0
C6	C5	H51	H52	240.6	120.1
C4	C5	H51	H52	119.5	240.1
H51	C5	C4	O42	222.3	60.0
H51	C5	C4	O41	41.1	240.0
H52	C5	C6	H61	349.1	300.0
H52	C5	C6	H62	106.7	180.0
C6	C5	H52	C4	238.4	120.0
C6	C5	H52	H51	119.2	239.9
C4	C5	H52	H51	240.8	119.9
H52	C5	C4	O42	343.2	300.0
H52	C5	C4	O41	161.9	120.0
O42	C4	C5	H51	222.3	60.0
O42	C4	C5	H52	343.2	300.0
C5	C4	O42	O41	178.7	180.0
O41	C4	C5	H51	41.1	240.0
O41	C4	C5	H52	161.9	120.0
C5	C4	O41	O42	181.3	180.0
O41	C4	O42	H42	360.0	-0.0
H42	O42	C4	O41	360.0	-0.0