PDB Chemical Component TMP

Ideal Model

Chemical Description

Name THYMIDINE-5'-PHOSPHATE
Formula C10 H15 N2 O8 P
Formal charge 0
Molecular weight 322.208 g/mol
Component type NON-POLYMER

Chemical features

Atom count 36
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms O3P
Bond count 37
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 5'-thymidylic acid
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) CC1=CN([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES (CACTVS) CC1=CN([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)NC1=O
Stereo SMILES (OpenEye) CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)O
InChI descriptor InChI=1S/C10H15N2O8P/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(20-8)4-19-21(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1
InChIKey descriptor GYOZYWVXFNDGLU-XLPZGREQSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Processing site EBI