PDB Chemical Component SS2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SS2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C1 |
1.434 |
1.429 |
O1 |
HO1 |
0.951 |
0.967 |
C1 |
C2 |
1.486 |
1.507 |
C1 |
C8 |
1.528 |
1.529 |
C1 |
H1 |
1.115 |
1.090 |
C2 |
C3 |
1.397 |
1.382 |
C2 |
C7 |
1.387 |
1.383 |
C3 |
C4 |
1.393 |
1.382 |
C3 |
H3 |
1.103 |
1.081 |
C4 |
C5 |
1.393 |
1.383 |
C4 |
H4 |
1.103 |
1.080 |
C5 |
C6 |
1.391 |
1.382 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
C7 |
1.390 |
1.383 |
C6 |
H6 |
1.103 |
1.080 |
C7 |
H7 |
1.103 |
1.079 |
C8 |
H81 |
1.115 |
1.089 |
C8 |
H82 |
1.115 |
1.090 |
C8 |
H83 |
1.116 |
1.090 |
Bond Angles for SS2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
O1 |
HO1 |
109.5 |
106.8 |
O1 |
C1 |
C2 |
109.5 |
109.4 |
O1 |
C1 |
C8 |
109.5 |
109.5 |
O1 |
C1 |
H1 |
110.0 |
109.4 |
C2 |
C1 |
C8 |
111.2 |
109.5 |
C2 |
C1 |
H1 |
108.4 |
109.4 |
C1 |
C2 |
C3 |
120.7 |
120.0 |
C1 |
C2 |
C7 |
120.0 |
120.0 |
C8 |
C1 |
H1 |
108.2 |
109.5 |
C1 |
C8 |
H81 |
109.6 |
109.5 |
C1 |
C8 |
H82 |
112.2 |
109.4 |
C1 |
C8 |
H83 |
112.2 |
109.5 |
C3 |
C2 |
C7 |
119.3 |
120.0 |
C2 |
C3 |
C4 |
120.5 |
120.0 |
C2 |
C3 |
H3 |
119.9 |
120.0 |
C2 |
C7 |
C6 |
120.3 |
120.0 |
C2 |
C7 |
H7 |
119.7 |
120.0 |
C4 |
C3 |
H3 |
119.7 |
120.0 |
C3 |
C4 |
C5 |
119.8 |
120.0 |
C3 |
C4 |
H4 |
120.1 |
120.0 |
C5 |
C4 |
H4 |
120.1 |
120.0 |
C4 |
C5 |
C6 |
119.6 |
120.0 |
C4 |
C5 |
H5 |
120.3 |
120.0 |
C6 |
C5 |
H5 |
120.1 |
120.0 |
C5 |
C6 |
C7 |
120.4 |
120.0 |
C5 |
C6 |
H6 |
119.8 |
120.0 |
C7 |
C6 |
H6 |
119.8 |
120.0 |
C6 |
C7 |
H7 |
119.9 |
120.0 |
H81 |
C8 |
H82 |
112.2 |
109.5 |
H81 |
C8 |
H83 |
112.1 |
109.5 |
H82 |
C8 |
H83 |
98.2 |
109.4 |
Torsion Angles for SS2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
C8 |
237.8 |
240.0 |
C2 |
C1 |
O1 |
H1 |
119.0 |
119.9 |
O1 |
C1 |
C2 |
C3 |
228.2 |
39.8 |
O1 |
C1 |
C2 |
C7 |
47.8 |
220.0 |
C8 |
C1 |
O1 |
H1 |
241.2 |
240.0 |
O1 |
C1 |
C8 |
H81 |
180.0 |
180.0 |
O1 |
C1 |
C8 |
H82 |
305.3 |
300.0 |
O1 |
C1 |
C8 |
H83 |
54.7 |
60.0 |
HO1 |
O1 |
C1 |
C2 |
180.1 |
180.0 |
HO1 |
O1 |
C1 |
C8 |
302.2 |
300.0 |
HO1 |
O1 |
C1 |
H1 |
61.1 |
60.0 |
C2 |
C1 |
O1 |
HO1 |
180.1 |
180.0 |
O1 |
C1 |
C2 |
C8 |
121.2 |
120.0 |
O1 |
C1 |
C2 |
H1 |
240.0 |
240.1 |
C8 |
C1 |
C2 |
H1 |
118.8 |
120.0 |
C2 |
C1 |
C8 |
H81 |
301.2 |
300.0 |
C2 |
C1 |
C8 |
H82 |
66.4 |
60.0 |
C2 |
C1 |
C8 |
H83 |
175.9 |
180.0 |
C3 |
C2 |
C1 |
C7 |
180.4 |
179.8 |
C1 |
C2 |
C3 |
C4 |
179.8 |
179.8 |
C1 |
C2 |
C3 |
H3 |
359.7 |
0.2 |
C1 |
C2 |
C7 |
C6 |
180.2 |
180.0 |
C1 |
C2 |
C7 |
H7 |
0.2 |
0.1 |
C8 |
C1 |
O1 |
HO1 |
302.2 |
300.0 |
O1 |
C1 |
C8 |
C2 |
238.8 |
240.0 |
O1 |
C1 |
C8 |
H1 |
119.9 |
120.0 |
C2 |
C1 |
C8 |
H1 |
241.1 |
240.0 |
C8 |
C1 |
C2 |
C3 |
107.0 |
279.7 |
C8 |
C1 |
C2 |
C7 |
286.6 |
99.9 |
H81 |
C8 |
C1 |
H82 |
234.7 |
240.0 |
H81 |
C8 |
C1 |
H83 |
125.2 |
120.0 |
H82 |
C8 |
C1 |
H83 |
250.5 |
240.1 |
H1 |
C1 |
O1 |
HO1 |
61.1 |
60.0 |
O1 |
C1 |
H1 |
C2 |
119.7 |
119.9 |
O1 |
C1 |
H1 |
C8 |
240.4 |
240.0 |
C2 |
C1 |
H1 |
C8 |
120.7 |
120.0 |
H1 |
C1 |
C2 |
C3 |
348.2 |
159.7 |
H1 |
C1 |
C2 |
C7 |
167.7 |
339.9 |
H1 |
C1 |
C8 |
H81 |
60.1 |
60.0 |
H1 |
C1 |
C8 |
H82 |
185.3 |
180.0 |
H1 |
C1 |
C8 |
H83 |
294.8 |
300.0 |
C3 |
C2 |
C1 |
C8 |
107.0 |
279.7 |
C3 |
C2 |
C1 |
H1 |
348.2 |
159.7 |
C1 |
C2 |
C3 |
C7 |
179.6 |
180.2 |
C3 |
C2 |
C7 |
C6 |
359.8 |
0.2 |
C3 |
C2 |
C7 |
H7 |
179.8 |
180.3 |
C4 |
C3 |
C2 |
H3 |
180.0 |
179.6 |
C2 |
C3 |
C4 |
C5 |
359.9 |
0.4 |
C2 |
C3 |
C4 |
H4 |
179.9 |
180.2 |
C7 |
C2 |
C1 |
C8 |
286.6 |
99.9 |
C7 |
C2 |
C1 |
H1 |
167.7 |
339.9 |
C1 |
C2 |
C7 |
C3 |
180.4 |
179.8 |
C7 |
C2 |
C3 |
C4 |
0.2 |
359.6 |
C7 |
C2 |
C3 |
H3 |
180.1 |
180.0 |
C5 |
C6 |
C7 |
C2 |
0.1 |
0.1 |
C2 |
C7 |
C6 |
H6 |
180.2 |
180.0 |
C6 |
C7 |
C2 |
H7 |
180.0 |
179.9 |
C4 |
C3 |
C2 |
C7 |
0.2 |
359.6 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.4 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.2 |
C3 |
C4 |
C5 |
C6 |
360.0 |
359.8 |
C3 |
C4 |
C5 |
H5 |
179.9 |
179.9 |
H3 |
C3 |
C2 |
C7 |
180.1 |
180.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
179.6 |
H3 |
C3 |
C4 |
C5 |
180.0 |
180.0 |
H3 |
C3 |
C4 |
H4 |
359.9 |
359.8 |
C5 |
C4 |
C3 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
179.8 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C7 |
360.0 |
359.9 |
C4 |
C5 |
C6 |
H6 |
179.9 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.9 |
359.8 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.2 |
H4 |
C4 |
C5 |
C6 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
H5 |
360.0 |
0.0 |
C2 |
C7 |
C6 |
C5 |
0.1 |
0.1 |
C6 |
C5 |
C4 |
H4 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C7 |
C6 |
C5 |
H6 |
180.1 |
179.9 |
C5 |
C6 |
C7 |
H7 |
180.1 |
180.0 |
H5 |
C5 |
C4 |
H4 |
360.0 |
0.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
C7 |
180.0 |
179.9 |
H5 |
C5 |
C6 |
H6 |
360.0 |
360.0 |
C2 |
C7 |
C6 |
H7 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
H5 |
180.0 |
179.9 |
C5 |
C6 |
C7 |
H6 |
179.9 |
180.1 |
H6 |
C6 |
C5 |
H5 |
360.0 |
360.0 |
C5 |
C6 |
H6 |
C7 |
180.1 |
179.9 |
H6 |
C6 |
C7 |
H7 |
0.2 |
359.9 |
C2 |
C7 |
H7 |
C6 |
180.0 |
179.9 |
H7 |
C7 |
C6 |
H6 |
0.2 |
359.9 |
H81 |
C8 |
C1 |
H1 |
60.1 |
60.0 |
C1 |
C8 |
H81 |
H82 |
125.3 |
120.0 |
C1 |
C8 |
H81 |
H83 |
234.7 |
239.9 |
H82 |
C8 |
H81 |
H83 |
109.4 |
120.0 |
H82 |
C8 |
C1 |
H1 |
185.3 |
180.0 |
C1 |
C8 |
H82 |
H81 |
236.1 |
240.0 |
C1 |
C8 |
H82 |
H83 |
118.1 |
120.0 |
H81 |
C8 |
H82 |
H83 |
242.0 |
240.0 |
H83 |
C8 |
C1 |
H1 |
294.8 |
300.0 |
C1 |
C8 |
H83 |
H81 |
123.8 |
120.1 |
C1 |
C8 |
H83 |
H82 |
241.8 |
240.1 |
H81 |
C8 |
H83 |
H82 |
118.0 |
120.0 |