PDB Chemical Component PSE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PSE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N2 |
C2 |
1.482 |
1.468 |
N2 |
HN21 |
1.021 |
1.008 |
N2 |
HN22 |
1.020 |
1.009 |
C2 |
C1 |
1.545 |
1.529 |
C2 |
C3 |
1.529 |
1.530 |
C2 |
H2 |
1.115 |
1.090 |
C1 |
O1 |
1.305 |
1.429 |
C1 |
H11 |
1.115 |
1.090 |
C1 |
H12 |
1.115 |
1.090 |
O1 |
HO1 |
0.949 |
0.967 |
C3 |
O1P |
1.438 |
1.427 |
C3 |
H31 |
1.114 |
1.090 |
C3 |
H32 |
1.116 |
1.090 |
O1P |
P |
1.602 |
1.609 |
O2P |
P |
1.496 |
1.480 |
O3P |
P |
1.499 |
1.610 |
O3P |
HO3 |
0.949 |
0.968 |
O4P |
P |
1.542 |
1.609 |
O4P |
HO4 |
0.949 |
0.966 |
Bond Angles for PSE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N2 |
HN21 |
107.6 |
106.8 |
C2 |
N2 |
HN22 |
112.9 |
106.7 |
N2 |
C2 |
C1 |
107.6 |
109.5 |
N2 |
C2 |
C3 |
110.0 |
109.4 |
N2 |
C2 |
H2 |
110.8 |
109.5 |
HN21 |
N2 |
HN22 |
112.9 |
106.7 |
C1 |
C2 |
C3 |
110.9 |
109.5 |
C1 |
C2 |
H2 |
109.9 |
109.5 |
C2 |
C1 |
O1 |
113.7 |
109.5 |
C2 |
C1 |
H11 |
110.6 |
109.5 |
C2 |
C1 |
H12 |
110.6 |
109.5 |
C3 |
C2 |
H2 |
107.6 |
109.4 |
C2 |
C3 |
O1P |
106.1 |
109.6 |
C2 |
C3 |
H31 |
113.5 |
109.4 |
C2 |
C3 |
H32 |
113.4 |
109.5 |
O1 |
C1 |
H11 |
110.7 |
109.5 |
O1 |
C1 |
H12 |
110.7 |
109.4 |
C1 |
O1 |
HO1 |
113.7 |
106.8 |
H11 |
C1 |
H12 |
99.6 |
109.5 |
O1P |
C3 |
H31 |
113.5 |
109.5 |
O1P |
C3 |
H32 |
113.5 |
109.5 |
C3 |
O1P |
P |
122.3 |
106.8 |
H31 |
C3 |
H32 |
97.0 |
109.4 |
O1P |
P |
O2P |
109.4 |
109.4 |
O1P |
P |
O3P |
109.0 |
109.5 |
O1P |
P |
O4P |
101.5 |
109.4 |
O2P |
P |
O3P |
115.2 |
109.5 |
O2P |
P |
O4P |
110.2 |
109.5 |
P |
O3P |
HO3 |
109.0 |
106.8 |
O3P |
P |
O4P |
110.6 |
109.5 |
P |
O4P |
HO4 |
101.5 |
106.8 |
Torsion Angles for PSE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
HN21 |
N2 |
C2 |
HN22 |
125.3 |
113.7 |
C1 |
C2 |
N2 |
C3 |
120.9 |
120.1 |
C1 |
C2 |
N2 |
H2 |
239.8 |
240.0 |
N2 |
C2 |
C1 |
O1 |
179.9 |
60.0 |
N2 |
C2 |
C1 |
H11 |
305.2 |
180.0 |
N2 |
C2 |
C1 |
H12 |
54.6 |
300.0 |
C3 |
C2 |
N2 |
H2 |
118.8 |
119.9 |
N2 |
C2 |
C3 |
O1P |
47.3 |
300.1 |
N2 |
C2 |
C3 |
H31 |
172.6 |
60.1 |
N2 |
C2 |
C3 |
H32 |
282.1 |
180.0 |
C2 |
N2 |
HN21 |
HN22 |
234.7 |
246.3 |
HN21 |
N2 |
C2 |
C1 |
180.1 |
173.7 |
HN21 |
N2 |
C2 |
C3 |
59.1 |
53.7 |
HN21 |
N2 |
C2 |
H2 |
300.3 |
293.7 |
C2 |
N2 |
HN22 |
HN21 |
122.4 |
113.8 |
HN22 |
N2 |
C2 |
C1 |
54.7 |
60.0 |
HN22 |
N2 |
C2 |
C3 |
293.8 |
299.9 |
HN22 |
N2 |
C2 |
H2 |
174.9 |
180.0 |
C1 |
C2 |
N2 |
HN21 |
180.1 |
173.7 |
C1 |
C2 |
N2 |
HN22 |
54.7 |
60.0 |
N2 |
C2 |
C1 |
C3 |
239.7 |
240.0 |
N2 |
C2 |
C1 |
H2 |
120.8 |
120.0 |
C3 |
C2 |
C1 |
H2 |
241.1 |
240.0 |
C1 |
C2 |
C3 |
O1P |
288.4 |
180.0 |
C1 |
C2 |
C3 |
H31 |
53.7 |
300.1 |
C1 |
C2 |
C3 |
H32 |
163.2 |
59.9 |
O1 |
C1 |
C2 |
H11 |
234.7 |
240.0 |
O1 |
C1 |
C2 |
H12 |
125.3 |
120.0 |
C2 |
C1 |
O1 |
HO1 |
180.1 |
180.0 |
H11 |
C1 |
C2 |
H12 |
250.6 |
240.0 |
C3 |
C2 |
N2 |
HN21 |
59.1 |
53.7 |
C3 |
C2 |
N2 |
HN22 |
293.8 |
299.9 |
N2 |
C2 |
C3 |
C1 |
118.9 |
120.0 |
N2 |
C2 |
C3 |
H2 |
239.2 |
240.0 |
C1 |
C2 |
C3 |
H2 |
120.2 |
120.0 |
C3 |
C2 |
C1 |
O1 |
300.2 |
180.0 |
C3 |
C2 |
C1 |
H11 |
65.5 |
300.0 |
C3 |
C2 |
C1 |
H12 |
174.9 |
60.0 |
O1P |
C3 |
C2 |
H31 |
234.7 |
240.0 |
O1P |
C3 |
C2 |
H32 |
125.2 |
120.1 |
C2 |
C3 |
O1P |
P |
164.4 |
180.0 |
H31 |
C3 |
C2 |
H32 |
250.5 |
240.1 |
H2 |
C2 |
N2 |
HN21 |
300.3 |
293.7 |
H2 |
C2 |
N2 |
HN22 |
174.9 |
180.0 |
N2 |
C2 |
H2 |
C1 |
241.2 |
240.0 |
N2 |
C2 |
H2 |
C3 |
120.3 |
119.9 |
C1 |
C2 |
H2 |
C3 |
239.1 |
240.0 |
H2 |
C2 |
C1 |
O1 |
59.1 |
300.0 |
H2 |
C2 |
C1 |
H11 |
184.4 |
60.0 |
H2 |
C2 |
C1 |
H12 |
293.8 |
180.0 |
H2 |
C2 |
C3 |
O1P |
168.1 |
60.0 |
H2 |
C2 |
C3 |
H31 |
293.4 |
180.1 |
H2 |
C2 |
C3 |
H32 |
42.9 |
299.9 |
O1 |
C1 |
C2 |
C3 |
300.2 |
180.0 |
O1 |
C1 |
C2 |
H2 |
59.1 |
300.0 |
C2 |
C1 |
O1 |
H11 |
125.3 |
120.0 |
C2 |
C1 |
O1 |
H12 |
234.8 |
240.0 |
H11 |
C1 |
O1 |
H12 |
109.5 |
120.0 |
H11 |
C1 |
C2 |
C3 |
65.5 |
300.0 |
H11 |
C1 |
C2 |
H2 |
184.4 |
60.0 |
C2 |
C1 |
H11 |
O1 |
233.0 |
240.0 |
C2 |
C1 |
H11 |
H12 |
116.4 |
120.0 |
O1 |
C1 |
H11 |
H12 |
243.4 |
240.0 |
H11 |
C1 |
O1 |
HO1 |
54.8 |
60.0 |
H12 |
C1 |
C2 |
C3 |
174.9 |
60.0 |
H12 |
C1 |
C2 |
H2 |
293.8 |
180.0 |
C2 |
C1 |
H12 |
O1 |
127.0 |
120.0 |
C2 |
C1 |
H12 |
H11 |
243.5 |
240.0 |
O1 |
C1 |
H12 |
H11 |
116.5 |
120.0 |
H12 |
C1 |
O1 |
HO1 |
305.3 |
300.0 |
HO1 |
O1 |
C1 |
H11 |
54.8 |
60.0 |
HO1 |
O1 |
C1 |
H12 |
305.3 |
300.0 |
O1P |
C3 |
C2 |
H2 |
168.1 |
60.0 |
C2 |
C3 |
O1P |
H31 |
125.3 |
120.0 |
C2 |
C3 |
O1P |
H32 |
234.8 |
239.9 |
H31 |
C3 |
O1P |
H32 |
109.5 |
119.9 |
C3 |
O1P |
P |
O2P |
62.8 |
60.0 |
C3 |
O1P |
P |
O3P |
296.0 |
180.0 |
C3 |
O1P |
P |
O4P |
179.2 |
300.0 |
H31 |
C3 |
C2 |
H2 |
293.4 |
180.1 |
C2 |
C3 |
H31 |
O1P |
238.7 |
239.9 |
C2 |
C3 |
H31 |
H32 |
119.3 |
119.9 |
O1P |
C3 |
H31 |
H32 |
240.6 |
240.0 |
H31 |
C3 |
O1P |
P |
39.1 |
60.0 |
H32 |
C3 |
C2 |
H2 |
42.9 |
299.9 |
C2 |
C3 |
H32 |
O1P |
121.2 |
120.1 |
C2 |
C3 |
H32 |
H31 |
240.6 |
240.1 |
O1P |
C3 |
H32 |
H31 |
119.4 |
120.0 |
H32 |
C3 |
O1P |
P |
289.6 |
300.1 |
P |
O1P |
C3 |
H31 |
39.1 |
60.0 |
P |
O1P |
C3 |
H32 |
289.6 |
300.1 |
O2P |
P |
O1P |
O3P |
126.8 |
240.0 |
O2P |
P |
O1P |
O4P |
243.6 |
120.0 |
O1P |
P |
O3P |
HO3 |
180.0 |
180.0 |
O3P |
P |
O1P |
O4P |
116.7 |
240.0 |
O1P |
P |
O4P |
HO4 |
180.0 |
300.0 |
O1P |
P |
O2P |
O3P |
236.8 |
120.0 |
O1P |
P |
O2P |
O4P |
110.8 |
240.0 |
O2P |
P |
O3P |
HO3 |
56.6 |
300.0 |
O3P |
P |
O2P |
O4P |
234.0 |
120.0 |
O2P |
P |
O4P |
HO4 |
295.9 |
180.0 |
O1P |
P |
O3P |
O2P |
123.4 |
240.0 |
O1P |
P |
O3P |
O4P |
249.2 |
120.0 |
O2P |
P |
O3P |
O4P |
125.8 |
240.0 |
O3P |
P |
O4P |
HO4 |
64.4 |
60.0 |
HO3 |
O3P |
P |
O4P |
290.8 |
60.0 |
O1P |
P |
O4P |
O2P |
244.1 |
120.0 |
O1P |
P |
O4P |
O3P |
115.6 |
240.0 |
O2P |
P |
O4P |
O3P |
231.4 |
120.0 |
O4P |
P |
O3P |
HO3 |
290.8 |
60.0 |