PDB Chemical Component PMA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for PMA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.422 |
1.406 |
C1 |
C3 |
1.408 |
1.392 |
C1 |
C9 |
1.529 |
1.480 |
C2 |
C6 |
1.416 |
1.391 |
C2 |
C10 |
1.506 |
1.480 |
C3 |
C5 |
1.398 |
1.392 |
C3 |
H3 |
1.103 |
1.080 |
C4 |
C5 |
1.422 |
1.405 |
C4 |
C6 |
1.397 |
1.392 |
C4 |
C7 |
1.483 |
1.480 |
C5 |
C8 |
1.487 |
1.480 |
C6 |
H6 |
1.103 |
1.080 |
C7 |
O5 |
1.214 |
1.215 |
C7 |
O6 |
1.277 |
1.347 |
C8 |
O7 |
1.282 |
1.214 |
C8 |
O8 |
1.248 |
1.346 |
C9 |
O1 |
1.371 |
1.214 |
C9 |
O2 |
1.309 |
1.346 |
C10 |
O3 |
1.196 |
1.214 |
C10 |
O4 |
1.335 |
1.346 |
O2 |
HO2 |
0.951 |
0.967 |
O4 |
HO4 |
0.950 |
0.967 |
O6 |
HO6 |
0.951 |
0.967 |
O8 |
HO8 |
0.950 |
0.967 |
Bond Angles for PMA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C3 |
119.1 |
120.0 |
C2 |
C1 |
C9 |
122.4 |
120.0 |
C1 |
C2 |
C6 |
118.7 |
120.0 |
C1 |
C2 |
C10 |
123.3 |
120.0 |
C3 |
C1 |
C9 |
118.5 |
120.0 |
C1 |
C3 |
C5 |
121.0 |
120.0 |
C1 |
C3 |
H3 |
119.8 |
120.0 |
C1 |
C9 |
O1 |
120.7 |
120.0 |
C1 |
C9 |
O2 |
129.9 |
120.0 |
C6 |
C2 |
C10 |
118.0 |
120.0 |
C2 |
C6 |
C4 |
121.3 |
120.0 |
C2 |
C6 |
H6 |
120.1 |
120.0 |
C2 |
C10 |
O3 |
121.6 |
120.0 |
C2 |
C10 |
O4 |
120.0 |
120.0 |
C5 |
C3 |
H3 |
119.1 |
120.0 |
C3 |
C5 |
C4 |
119.4 |
120.0 |
C3 |
C5 |
C8 |
118.5 |
120.0 |
C5 |
C4 |
C6 |
119.3 |
120.0 |
C5 |
C4 |
C7 |
121.5 |
120.0 |
C4 |
C5 |
C8 |
122.1 |
120.0 |
C6 |
C4 |
C7 |
119.2 |
120.0 |
C4 |
C6 |
H6 |
118.7 |
120.0 |
C4 |
C7 |
O5 |
129.1 |
120.0 |
C4 |
C7 |
O6 |
119.6 |
120.0 |
C5 |
C8 |
O7 |
123.0 |
120.0 |
C5 |
C8 |
O8 |
118.9 |
120.1 |
O5 |
C7 |
O6 |
111.3 |
120.0 |
C7 |
O6 |
HO6 |
119.6 |
120.0 |
O7 |
C8 |
O8 |
118.1 |
120.0 |
C8 |
O8 |
HO8 |
118.9 |
120.1 |
O1 |
C9 |
O2 |
109.4 |
120.0 |
C9 |
O2 |
HO2 |
129.9 |
120.0 |
O3 |
C10 |
O4 |
118.5 |
120.0 |
C10 |
O4 |
HO4 |
119.9 |
120.0 |
Torsion Angles for PMA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
C2 |
C9 |
180.1 |
179.6 |
C2 |
C1 |
C3 |
C5 |
11.1 |
0.3 |
C2 |
C1 |
C3 |
H3 |
191.1 |
180.3 |
C2 |
C1 |
C9 |
O1 |
107.0 |
58.2 |
C2 |
C1 |
C9 |
O2 |
286.3 |
238.2 |
C6 |
C2 |
C1 |
C10 |
180.3 |
179.5 |
C1 |
C2 |
C6 |
C4 |
8.3 |
0.5 |
C1 |
C2 |
C6 |
H6 |
188.3 |
180.3 |
C1 |
C2 |
C10 |
O3 |
104.0 |
5.6 |
C1 |
C2 |
C10 |
O4 |
284.2 |
185.6 |
C2 |
C1 |
C3 |
C9 |
179.9 |
180.4 |
C3 |
C1 |
C2 |
C6 |
349.3 |
359.4 |
C3 |
C1 |
C2 |
C10 |
169.0 |
180.0 |
C3 |
C1 |
C9 |
O1 |
287.0 |
238.5 |
C3 |
C1 |
C9 |
O2 |
106.2 |
58.5 |
C5 |
C3 |
C1 |
H3 |
180.0 |
180.0 |
C1 |
C3 |
C5 |
C4 |
351.3 |
360.0 |
C1 |
C3 |
C5 |
C8 |
170.6 |
179.9 |
C2 |
C1 |
C9 |
C3 |
180.1 |
179.6 |
C9 |
C1 |
C2 |
C6 |
169.2 |
179.8 |
C9 |
C1 |
C2 |
C10 |
348.9 |
0.3 |
C9 |
C1 |
C3 |
C5 |
191.2 |
180.0 |
C9 |
C1 |
C3 |
H3 |
11.1 |
360.0 |
O1 |
C9 |
C1 |
O2 |
180.8 |
180.0 |
C1 |
C9 |
O2 |
HO2 |
180.0 |
180.0 |
C6 |
C2 |
C1 |
C3 |
349.3 |
359.4 |
C6 |
C2 |
C1 |
C9 |
169.2 |
179.8 |
C1 |
C2 |
C6 |
C10 |
179.7 |
180.5 |
C6 |
C2 |
C10 |
O3 |
283.7 |
186.1 |
C6 |
C2 |
C10 |
O4 |
103.9 |
6.1 |
C5 |
C4 |
C6 |
C2 |
354.1 |
359.8 |
C2 |
C6 |
C4 |
C7 |
173.7 |
179.8 |
C4 |
C6 |
C2 |
H6 |
179.9 |
180.2 |
C10 |
C2 |
C1 |
C3 |
169.0 |
180.0 |
C10 |
C2 |
C1 |
C9 |
348.9 |
0.3 |
C1 |
C2 |
C10 |
C6 |
180.3 |
179.5 |
C10 |
C2 |
C6 |
C4 |
188.6 |
180.0 |
C10 |
C2 |
C6 |
H6 |
8.7 |
359.8 |
O3 |
C10 |
C2 |
O4 |
179.8 |
180.0 |
C2 |
C10 |
O4 |
HO4 |
180.0 |
180.0 |
C5 |
C3 |
C1 |
C9 |
191.2 |
180.0 |
C1 |
C3 |
C5 |
H3 |
180.0 |
180.0 |
C3 |
C5 |
C4 |
C6 |
5.9 |
0.0 |
C3 |
C5 |
C4 |
C7 |
186.4 |
180.0 |
C4 |
C5 |
C3 |
C8 |
180.7 |
180.0 |
C3 |
C5 |
C8 |
O7 |
27.5 |
121.8 |
C3 |
C5 |
C8 |
O8 |
207.2 |
301.8 |
H3 |
C3 |
C1 |
C9 |
11.1 |
360.0 |
C1 |
C3 |
H3 |
C5 |
180.0 |
180.0 |
H3 |
C3 |
C5 |
C4 |
171.4 |
180.0 |
H3 |
C3 |
C5 |
C8 |
350.7 |
360.0 |
C2 |
C6 |
C4 |
C5 |
354.1 |
359.8 |
C4 |
C5 |
C3 |
H3 |
171.4 |
180.0 |
C3 |
C5 |
C4 |
C8 |
179.3 |
180.0 |
C6 |
C4 |
C5 |
C7 |
179.5 |
180.0 |
C5 |
C4 |
C6 |
H6 |
174.1 |
180.0 |
C5 |
C4 |
C7 |
O5 |
78.0 |
353.9 |
C5 |
C4 |
C7 |
O6 |
257.0 |
173.8 |
C4 |
C5 |
C8 |
O7 |
206.8 |
301.7 |
C4 |
C5 |
C8 |
O8 |
26.5 |
121.8 |
C4 |
C6 |
C2 |
C10 |
188.6 |
180.0 |
C2 |
C6 |
C4 |
H6 |
180.1 |
179.8 |
C5 |
C4 |
C6 |
C7 |
180.5 |
180.0 |
C6 |
C4 |
C5 |
C8 |
186.6 |
180.0 |
C6 |
C4 |
C7 |
O5 |
258.5 |
173.8 |
C6 |
C4 |
C7 |
O6 |
77.5 |
353.8 |
C5 |
C4 |
C7 |
C6 |
179.5 |
180.0 |
C7 |
C4 |
C5 |
C8 |
7.1 |
360.0 |
C7 |
C4 |
C6 |
H6 |
353.6 |
360.0 |
O5 |
C7 |
C4 |
O6 |
181.0 |
180.0 |
C4 |
C7 |
O6 |
HO6 |
180.0 |
180.0 |
C8 |
C5 |
C3 |
H3 |
350.7 |
360.0 |
C3 |
C5 |
C8 |
C4 |
180.7 |
180.0 |
C8 |
C5 |
C4 |
C6 |
186.6 |
180.0 |
C8 |
C5 |
C4 |
C7 |
7.1 |
360.0 |
O7 |
C8 |
C5 |
O8 |
180.3 |
180.0 |
C5 |
C8 |
O8 |
HO8 |
180.0 |
180.0 |
H6 |
C6 |
C2 |
C10 |
8.7 |
359.8 |
C2 |
C6 |
H6 |
C4 |
179.9 |
180.2 |
H6 |
C6 |
C4 |
C7 |
353.6 |
360.0 |
C4 |
C7 |
O5 |
O6 |
179.1 |
180.0 |
O5 |
C7 |
O6 |
HO6 |
359.2 |
360.0 |
C4 |
C7 |
O6 |
O5 |
180.8 |
180.0 |
C5 |
C8 |
O7 |
O8 |
179.7 |
180.0 |
O7 |
C8 |
O8 |
HO8 |
359.7 |
0.0 |
C5 |
C8 |
O8 |
O7 |
180.3 |
180.0 |
C1 |
C9 |
O1 |
O2 |
179.4 |
180.0 |
O1 |
C9 |
O2 |
HO2 |
359.3 |
360.0 |
C1 |
C9 |
O2 |
O1 |
180.7 |
180.0 |
C2 |
C10 |
O3 |
O4 |
180.2 |
180.0 |
O3 |
C10 |
O4 |
HO4 |
0.3 |
360.0 |
C2 |
C10 |
O4 |
O3 |
179.8 |
180.0 |