PDB Chemical Component PAB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for PAB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1' O1' 1.226 1.215
C1' O2' 1.242 1.346
C1' C1 1.424 1.474
O2' HO2' 0.951 0.967
C1 C2 1.381 1.399
C1 C6 1.382 1.396
C2 C3 1.358 1.371
C2 H2 1.102 1.079
C3 C4 1.387 1.391
C3 H3 1.103 1.080
C4 C5 1.369 1.393
C4 N4 1.327 1.390
C5 C6 1.371 1.371
C5 H5 1.104 1.080
C6 H6 1.103 1.080
N4 HN41 1.021 0.970
N4 HN42 1.020 0.969

Bond Angles for PAB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1' C1' O2' 114.8 120.0
O1' C1' C1 123.9 120.0
O2' C1' C1 121.2 120.0
C1' O2' HO2' 114.9 120.0
C1' C1 C2 123.4 120.0
C1' C1 C6 119.6 120.1
C2 C1 C6 116.8 119.9
C1 C2 C3 121.7 119.8
C1 C2 H2 120.0 120.1
C1 C6 C5 122.3 119.9
C1 C6 H6 119.3 120.1
C3 C2 H2 118.3 120.0
C2 C3 C4 120.4 120.1
C2 C3 H3 118.8 119.9
C4 C3 H3 120.8 120.0
C3 C4 C5 119.0 120.1
C3 C4 N4 123.1 119.9
C5 C4 N4 117.8 119.9
C4 C5 C6 119.6 120.0
C4 C5 H5 120.1 120.0
C4 N4 HN41 123.1 120.0
C4 N4 HN42 107.4 120.0
C6 C5 H5 120.2 120.0
C5 C6 H6 118.4 120.0
HN41 N4 HN42 107.3 120.0

Torsion Angles for PAB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2' C1' O1' C1 177.4 180.0
O1' C1' O2' HO2' 180.0 359.9
O1' C1' C1 C2 358.7 -0.0
O1' C1' C1 C6 173.9 180.0
O1' C1' O2' C1 182.6 180.0
O2' C1' C1 C2 181.5 180.0
O2' C1' C1 C6 356.7 360.0
O1' C1' C1 O2' 177.2 180.0
C1 C1' O2' HO2' 357.4 179.9
C2 C1 C1' C6 184.8 180.0
C1' C1 C2 C3 175.5 180.0
C1' C1 C2 H2 355.5 359.9
C1' C1 C6 C5 184.4 179.8
C1' C1 C6 H6 4.4 360.0
HO2' O2' C1' C1 357.4 179.9
C1' C1 C2 C6 175.3 180.0
C2 C1 C6 C5 359.9 359.8
C2 C1 C6 H6 179.9 179.9
C3 C2 C1 H2 180.0 180.1
C1 C2 C3 C4 359.9 360.0
C1 C2 C3 H3 179.9 180.0
C1' C1 C6 C2 184.5 180.0
C6 C1 C2 C3 0.2 0.0
C6 C1 C2 H2 180.2 180.0
C4 C5 C6 C1 359.9 0.4
C1 C6 C5 H5 180.0 180.0
C5 C6 C1 H6 180.0 179.8
C3 C2 C1 C6 0.2 0.0
C1 C2 C3 H2 180.0 179.9
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 359.9 0.2
C2 C3 C4 N4 179.1 180.0
H2 C2 C1 C6 180.2 180.0
C1 C2 H2 C3 180.0 180.1
H2 C2 C3 C4 179.9 180.0
H2 C2 C3 H3 359.9 0.1
C4 C3 C2 H2 179.9 180.0
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 N4 180.9 180.2
C3 C4 C5 C6 0.2 359.6
C3 C4 C5 H5 180.1 180.0
C3 C4 N4 HN41 180.0 180.0
C3 C4 N4 HN42 54.8 359.8
H3 C3 C2 H2 359.9 0.1
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 179.9 180.2
H3 C3 C4 N4 359.1 360.0
C1 C6 C5 C4 359.9 0.4
C5 C4 C3 H3 179.9 180.2
C3 C4 C5 N4 179.2 179.8
C5 C4 N4 HN41 359.2 359.7
C5 C4 N4 HN42 233.9 179.6
C6 C5 C4 H5 180.0 179.6
C4 C5 C6 H6 179.9 180.3
N4 C4 C3 H3 359.1 360.0
C3 C4 N4 C5 180.8 180.2
N4 C4 C5 C6 181.0 179.8
N4 C4 C5 H5 1.0 0.2
HN41 N4 C4 HN42 125.2 180.1
C1 C6 C5 H6 180.0 180.2
C6 C5 C4 N4 181.0 179.8
C4 C5 C6 H5 180.0 180.4
H5 C5 C4 N4 1.0 0.2
C4 C5 H5 C6 180.0 179.6
H5 C5 C6 H6 360.0 359.9
C1 C6 H6 C5 180.0 179.8
H6 C6 C5 H5 360.0 359.9
C4 N4 HN41 HN42 234.7 179.9
C4 N4 HN42 HN41 134.2 180.1