PDB Chemical Component OLE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for OLE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| ON |
CA |
1.428 |
1.429 |
| ON |
HO |
0.950 |
0.967 |
| CA |
C |
1.532 |
1.506 |
| CA |
CB |
1.560 |
1.528 |
| CA |
HA |
1.114 |
1.089 |
| C |
O |
1.241 |
1.208 |
| C |
OXT |
1.340 |
1.343 |
| CB |
CG |
1.541 |
1.529 |
| CB |
HB1 |
1.115 |
1.090 |
| CB |
HB2 |
1.116 |
1.089 |
| CG |
CD1 |
1.536 |
1.531 |
| CG |
CD2 |
1.515 |
1.530 |
| CG |
HG |
1.114 |
1.090 |
| CD1 |
HD11 |
1.116 |
1.090 |
| CD1 |
HD12 |
1.114 |
1.089 |
| CD1 |
HD13 |
1.114 |
1.089 |
| CD2 |
HD21 |
1.115 |
1.088 |
| CD2 |
HD22 |
1.115 |
1.091 |
| CD2 |
HD23 |
1.116 |
1.089 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for OLE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
ON |
HO |
109.5 |
106.8 |
| ON |
CA |
C |
109.5 |
109.4 |
| ON |
CA |
CB |
112.6 |
109.5 |
| ON |
CA |
HA |
107.1 |
109.5 |
| C |
CA |
CB |
108.7 |
109.5 |
| C |
CA |
HA |
111.1 |
109.5 |
| CA |
C |
O |
123.3 |
120.0 |
| CA |
C |
OXT |
114.4 |
120.0 |
| CB |
CA |
HA |
107.9 |
109.5 |
| CA |
CB |
CG |
111.8 |
109.5 |
| CA |
CB |
HB1 |
111.4 |
109.4 |
| CA |
CB |
HB2 |
111.4 |
109.5 |
| O |
C |
OXT |
122.3 |
120.0 |
| C |
OXT |
HXT |
114.4 |
120.0 |
| CG |
CB |
HB1 |
111.3 |
109.5 |
| CG |
CB |
HB2 |
111.3 |
109.5 |
| CB |
CG |
CD1 |
107.5 |
109.5 |
| CB |
CG |
CD2 |
102.4 |
109.5 |
| CB |
CG |
HG |
115.5 |
109.5 |
| HB1 |
CB |
HB2 |
99.0 |
109.5 |
| CD1 |
CG |
CD2 |
110.7 |
109.4 |
| CD1 |
CG |
HG |
108.0 |
109.4 |
| CG |
CD1 |
HD11 |
107.5 |
109.5 |
| CG |
CD1 |
HD12 |
112.9 |
109.5 |
| CG |
CD1 |
HD13 |
112.9 |
109.4 |
| CD2 |
CG |
HG |
112.6 |
109.5 |
| CG |
CD2 |
HD21 |
102.4 |
109.5 |
| CG |
CD2 |
HD22 |
114.9 |
109.4 |
| CG |
CD2 |
HD23 |
114.9 |
109.5 |
| HD11 |
CD1 |
HD12 |
113.0 |
109.5 |
| HD11 |
CD1 |
HD13 |
112.9 |
109.5 |
| HD12 |
CD1 |
HD13 |
97.6 |
109.5 |
| HD21 |
CD2 |
HD22 |
114.9 |
109.5 |
| HD21 |
CD2 |
HD23 |
115.0 |
109.5 |
| HD22 |
CD2 |
HD23 |
95.5 |
109.5 |
Torsion Angles for OLE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
ON |
CB |
121.1 |
120.0 |
| C |
CA |
ON |
HA |
239.5 |
240.0 |
| ON |
CA |
C |
O |
142.5 |
0.0 |
| ON |
CA |
C |
OXT |
322.1 |
180.0 |
| CB |
CA |
ON |
HA |
118.4 |
120.0 |
| ON |
CA |
CB |
CG |
179.1 |
300.0 |
| ON |
CA |
CB |
HB1 |
304.4 |
180.0 |
| ON |
CA |
CB |
HB2 |
53.9 |
60.0 |
| HO |
ON |
CA |
C |
180.0 |
60.0 |
| HO |
ON |
CA |
CB |
58.9 |
300.0 |
| HO |
ON |
CA |
HA |
300.5 |
180.0 |
| C |
CA |
ON |
HO |
180.0 |
60.0 |
| ON |
CA |
C |
CB |
236.6 |
240.0 |
| ON |
CA |
C |
HA |
118.1 |
120.0 |
| CB |
CA |
C |
HA |
241.5 |
240.0 |
| C |
CA |
CB |
CG |
57.6 |
180.0 |
| C |
CA |
CB |
HB1 |
182.9 |
60.0 |
| C |
CA |
CB |
HB2 |
292.3 |
300.0 |
| O |
C |
CA |
OXT |
180.5 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
ON |
HO |
58.9 |
300.0 |
| ON |
CA |
CB |
C |
121.5 |
120.0 |
| ON |
CA |
CB |
HA |
242.1 |
240.0 |
| C |
CA |
CB |
HA |
120.5 |
120.0 |
| CB |
CA |
C |
O |
265.9 |
120.0 |
| CB |
CA |
C |
OXT |
85.4 |
300.0 |
| CG |
CB |
CA |
HB1 |
234.7 |
120.0 |
| CG |
CB |
CA |
HB2 |
125.3 |
239.9 |
| CA |
CB |
CG |
CD1 |
67.5 |
180.0 |
| CA |
CB |
CG |
CD2 |
184.1 |
300.0 |
| CA |
CB |
CG |
HG |
306.9 |
60.0 |
| HB1 |
CB |
CA |
HB2 |
250.6 |
120.0 |
| HA |
CA |
ON |
HO |
300.5 |
180.0 |
| ON |
CA |
HA |
C |
240.5 |
240.0 |
| ON |
CA |
HA |
CB |
121.4 |
120.0 |
| C |
CA |
HA |
CB |
241.0 |
239.9 |
| HA |
CA |
C |
O |
24.5 |
240.0 |
| HA |
CA |
C |
OXT |
204.0 |
60.0 |
| HA |
CA |
CB |
CG |
297.1 |
59.9 |
| HA |
CA |
CB |
HB1 |
62.4 |
300.0 |
| HA |
CA |
CB |
HB2 |
171.8 |
180.0 |
| O |
C |
CA |
CB |
265.9 |
120.0 |
| O |
C |
CA |
HA |
24.5 |
240.0 |
| CA |
C |
O |
OXT |
179.5 |
180.0 |
| O |
C |
OXT |
HXT |
359.5 |
0.0 |
| OXT |
C |
CA |
CB |
85.4 |
300.0 |
| OXT |
C |
CA |
HA |
204.0 |
60.0 |
| CA |
C |
OXT |
O |
180.5 |
180.0 |
| CG |
CB |
CA |
HA |
297.1 |
59.9 |
| CA |
CB |
CG |
HB1 |
125.3 |
240.0 |
| CA |
CB |
CG |
HB2 |
234.7 |
120.0 |
| HB1 |
CB |
CG |
HB2 |
109.4 |
240.0 |
| CD1 |
CG |
CB |
CD2 |
243.4 |
240.0 |
| CD1 |
CG |
CB |
HG |
120.6 |
120.0 |
| CB |
CG |
CD1 |
HD11 |
180.0 |
180.0 |
| CB |
CG |
CD1 |
HD12 |
305.3 |
300.1 |
| CB |
CG |
CD1 |
HD13 |
54.8 |
60.0 |
| CD2 |
CG |
CB |
HG |
237.2 |
240.0 |
| CB |
CG |
CD2 |
HD21 |
180.0 |
300.0 |
| CB |
CG |
CD2 |
HD22 |
305.3 |
60.0 |
| CB |
CG |
CD2 |
HD23 |
54.7 |
179.9 |
| HB1 |
CB |
CA |
HA |
62.4 |
300.0 |
| CA |
CB |
HB1 |
CG |
234.4 |
120.0 |
| CA |
CB |
HB1 |
HB2 |
117.2 |
240.0 |
| CG |
CB |
HB1 |
HB2 |
242.8 |
120.0 |
| HB1 |
CB |
CG |
CD1 |
302.2 |
300.0 |
| HB1 |
CB |
CG |
CD2 |
58.8 |
60.0 |
| HB1 |
CB |
CG |
HG |
181.6 |
180.0 |
| HB2 |
CB |
CA |
HA |
171.8 |
180.0 |
| CA |
CB |
HB2 |
CG |
125.5 |
240.0 |
| CA |
CB |
HB2 |
HB1 |
242.7 |
120.0 |
| CG |
CB |
HB2 |
HB1 |
117.2 |
240.0 |
| HB2 |
CB |
CG |
CD1 |
192.8 |
60.0 |
| HB2 |
CB |
CG |
CD2 |
309.4 |
180.0 |
| HB2 |
CB |
CG |
HG |
72.2 |
300.0 |
| CD1 |
CG |
CB |
HB1 |
302.2 |
300.0 |
| CD1 |
CG |
CB |
HB2 |
192.8 |
60.0 |
| CB |
CG |
CD1 |
CD2 |
111.0 |
120.1 |
| CB |
CG |
CD1 |
HG |
234.7 |
240.0 |
| CD2 |
CG |
CD1 |
HG |
123.7 |
120.0 |
| CD1 |
CG |
CD2 |
HD21 |
294.3 |
60.1 |
| CD1 |
CG |
CD2 |
HD22 |
59.6 |
180.0 |
| CD1 |
CG |
CD2 |
HD23 |
169.0 |
300.0 |
| HD11 |
CD1 |
CG |
HD12 |
234.7 |
240.0 |
| HD11 |
CD1 |
CG |
HD13 |
125.2 |
120.0 |
| HD12 |
CD1 |
CG |
HD13 |
250.5 |
240.0 |
| CD2 |
CG |
CB |
HB1 |
58.8 |
60.0 |
| CD2 |
CG |
CB |
HB2 |
309.4 |
180.0 |
| CB |
CG |
CD2 |
CD1 |
245.7 |
240.0 |
| CB |
CG |
CD2 |
HG |
124.7 |
120.0 |
| CD1 |
CG |
CD2 |
HG |
239.0 |
240.1 |
| CD2 |
CG |
CD1 |
HD11 |
68.9 |
60.0 |
| CD2 |
CG |
CD1 |
HD12 |
194.2 |
180.0 |
| CD2 |
CG |
CD1 |
HD13 |
303.7 |
300.0 |
| HD21 |
CD2 |
CG |
HD22 |
234.7 |
240.0 |
| HD21 |
CD2 |
CG |
HD23 |
125.3 |
120.1 |
| HD22 |
CD2 |
CG |
HD23 |
250.6 |
240.1 |
| HG |
CG |
CB |
HB1 |
181.6 |
180.0 |
| HG |
CG |
CB |
HB2 |
72.2 |
300.0 |
| CB |
CG |
HG |
CD1 |
120.4 |
120.0 |
| CB |
CG |
HG |
CD2 |
242.8 |
239.9 |
| CD1 |
CG |
HG |
CD2 |
122.5 |
119.9 |
| HG |
CG |
CD1 |
HD11 |
305.3 |
300.0 |
| HG |
CG |
CD1 |
HD12 |
70.5 |
60.0 |
| HG |
CG |
CD1 |
HD13 |
180.0 |
180.0 |
| HG |
CG |
CD2 |
HD21 |
55.3 |
180.0 |
| HG |
CG |
CD2 |
HD22 |
180.6 |
300.0 |
| HG |
CG |
CD2 |
HD23 |
290.0 |
59.9 |
| HD11 |
CD1 |
CG |
CD2 |
68.9 |
60.0 |
| HD11 |
CD1 |
CG |
HG |
305.3 |
300.0 |
| CG |
CD1 |
HD11 |
HD12 |
125.2 |
120.0 |
| CG |
CD1 |
HD11 |
HD13 |
234.8 |
240.1 |
| HD12 |
CD1 |
HD11 |
HD13 |
109.6 |
120.1 |
| HD12 |
CD1 |
CG |
CD2 |
194.2 |
180.0 |
| HD12 |
CD1 |
CG |
HG |
70.5 |
60.0 |
| CG |
CD1 |
HD12 |
HD11 |
237.8 |
240.0 |
| CG |
CD1 |
HD12 |
HD13 |
118.9 |
119.9 |
| HD11 |
CD1 |
HD12 |
HD13 |
241.1 |
239.9 |
| HD13 |
CD1 |
CG |
CD2 |
303.7 |
300.0 |
| HD13 |
CD1 |
CG |
HG |
180.0 |
180.0 |
| CG |
CD1 |
HD13 |
HD11 |
122.2 |
120.0 |
| CG |
CD1 |
HD13 |
HD12 |
241.1 |
240.0 |
| HD11 |
CD1 |
HD13 |
HD12 |
119.0 |
120.1 |
| HD21 |
CD2 |
CG |
HG |
55.3 |
180.0 |
| CG |
CD2 |
HD21 |
HD22 |
125.3 |
119.9 |
| CG |
CD2 |
HD21 |
HD23 |
234.8 |
240.0 |
| HD22 |
CD2 |
HD21 |
HD23 |
109.5 |
120.1 |
| HD22 |
CD2 |
CG |
HG |
180.6 |
300.0 |
| CG |
CD2 |
HD22 |
HD21 |
241.5 |
240.0 |
| CG |
CD2 |
HD22 |
HD23 |
120.7 |
119.9 |
| HD21 |
CD2 |
HD22 |
HD23 |
239.2 |
239.9 |
| HD23 |
CD2 |
CG |
HG |
290.0 |
59.9 |
| CG |
CD2 |
HD23 |
HD21 |
118.4 |
120.0 |
| CG |
CD2 |
HD23 |
HD22 |
239.2 |
240.1 |
| HD21 |
CD2 |
HD23 |
HD22 |
120.8 |
120.1 |