PDB Chemical Component NTM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NTM

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.353 1.324
N1 C6 1.313 1.316
C2 C3 1.398 1.404
C2 C7 1.473 1.482
C3 C4 1.408 1.398
C3 C8 1.519 1.478
C4 C5 1.404 1.385
C4 H4 1.103 1.080
C5 C6 1.394 1.386
C5 H5 1.103 1.080
C6 H6 1.104 1.080
C7 O1 1.231 1.214
C7 O2 1.241 1.347
O2 HO2 0.951 0.967
C8 O3 1.294 1.214
C8 O4 1.267 1.347
O4 HO4 0.950 0.966

Bond Angles for NTM

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 122.5 121.8
N1 C2 C3 120.5 120.4
N1 C2 C7 117.1 119.7
N1 C6 C5 120.6 121.2
N1 C6 H6 116.7 119.4
C3 C2 C7 122.4 119.8
C2 C3 C4 118.1 118.8
C2 C3 C8 125.2 120.6
C2 C7 O1 124.0 120.0
C2 C7 O2 116.0 120.1
C4 C3 C8 116.7 120.6
C3 C4 C5 119.1 118.3
C3 C4 H4 120.6 120.8
C3 C8 O3 118.3 120.0
C3 C8 O4 119.8 120.0
C5 C4 H4 120.3 120.8
C4 C5 C6 119.2 119.5
C4 C5 H5 120.8 120.3
C6 C5 H5 120.0 120.3
C5 C6 H6 122.7 119.4
O1 C7 O2 119.9 120.0
C7 O2 HO2 116.0 120.0
O3 C8 O4 121.9 120.0
C8 O4 HO4 119.7 120.0

Torsion Angles for NTM

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C6 C5 1.5 359.7
C2 N1 C6 H6 181.6 179.7
C3 C2 N1 C7 179.4 180.6
N1 C2 C3 C4 358.2 359.4
N1 C2 C3 C8 177.8 179.7
N1 C2 C7 O1 303.6 174.7
N1 C2 C7 O2 121.5 354.8
C6 N1 C2 C3 0.5 0.6
C6 N1 C2 C7 181.1 180.0
C4 C5 C6 N1 357.8 360.0
N1 C6 C5 H5 177.8 180.0
C5 C6 N1 H6 180.0 180.1
C3 C2 N1 C6 0.5 0.6
N1 C2 C3 C7 180.6 179.4
C3 C2 C7 O1 124.2 354.1
C3 C2 C7 O2 302.1 174.2
C4 C3 C2 C8 180.4 179.8
C2 C3 C4 C5 1.1 0.2
C2 C3 C4 H4 181.1 180.2
C2 C3 C8 O3 327.1 304.9
C2 C3 C8 O4 148.7 125.0
C7 C2 N1 C6 181.1 180.0
N1 C2 C7 C3 179.4 180.6
C7 C2 C3 C4 177.6 180.0
C7 C2 C3 C8 357.2 0.3
O1 C7 C2 O2 182.2 179.9
C2 C7 O2 HO2 180.0 180.0
C4 C3 C2 C7 177.6 180.0
C2 C3 C4 C8 179.6 180.2
C4 C3 C8 O3 146.7 125.1
C4 C3 C8 O4 328.2 305.2
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 0.9 0.1
C3 C4 C5 H5 180.8 180.0
C8 C3 C2 C7 357.2 0.3
C2 C3 C8 C4 180.4 179.8
C8 C3 C4 C5 181.5 180.0
C8 C3 C4 H4 1.4 0.0
O3 C8 C3 O4 178.5 179.9
C3 C8 O4 HO4 180.0 180.0
N1 C6 C5 C4 357.8 360.0
C5 C4 C3 C8 181.5 180.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 H5 180.0 180.1
C4 C5 C6 H6 177.8 180.0
H4 C4 C3 C8 1.4 0.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 180.9 180.1
H4 C4 C5 H5 0.8 360.0
N1 C6 C5 H6 180.0 179.9
C6 C5 C4 H4 180.9 180.1
C4 C5 C6 H5 180.0 179.9
H5 C5 C4 H4 0.8 360.0
C4 C5 H5 C6 180.0 180.1
H5 C5 C6 H6 357.8 0.1
N1 C6 H6 C5 180.0 180.1
H6 C6 C5 H5 357.8 0.1
C2 C7 O1 O2 177.8 180.1
O1 C7 O2 HO2 357.9 0.0
C2 C7 O2 O1 182.1 179.9
C3 C8 O3 O4 181.6 180.1
O3 C8 O4 HO4 1.6 0.1
C3 C8 O4 O3 178.4 179.9