PDB Chemical Component NAR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NAR
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.403 |
1.387 |
C1 |
C6 |
1.401 |
1.389 |
C1 |
H11 |
1.103 |
1.080 |
C2 |
C3 |
1.408 |
1.390 |
C2 |
O4 |
1.363 |
1.356 |
C3 |
C4 |
1.388 |
1.382 |
C3 |
H31 |
1.103 |
1.080 |
C4 |
C5 |
1.411 |
1.404 |
C4 |
O5 |
1.378 |
1.356 |
C5 |
C6 |
1.403 |
1.404 |
C5 |
C7 |
1.480 |
1.470 |
C6 |
O1 |
1.364 |
1.349 |
C7 |
C8 |
1.503 |
1.521 |
C7 |
O2 |
1.241 |
1.214 |
C8 |
C9 |
1.526 |
1.537 |
C8 |
H81 |
1.115 |
1.090 |
C8 |
H82 |
1.116 |
1.090 |
C9 |
O1 |
1.401 |
1.418 |
C9 |
C10 |
1.566 |
1.507 |
C9 |
H9 |
1.114 |
1.090 |
C10 |
C11 |
1.398 |
1.381 |
C10 |
C15 |
1.405 |
1.383 |
C11 |
C12 |
1.422 |
1.382 |
C11 |
H111 |
1.103 |
1.080 |
C12 |
C13 |
1.411 |
1.388 |
C12 |
H121 |
1.103 |
1.079 |
C13 |
C14 |
1.401 |
1.385 |
C13 |
O3 |
1.336 |
1.359 |
C14 |
C15 |
1.391 |
1.382 |
C14 |
H141 |
1.103 |
1.080 |
C15 |
H151 |
1.103 |
1.080 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
H41 |
0.949 |
0.967 |
O5 |
H51 |
0.950 |
0.966 |
Bond Angles for NAR
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
121.7 |
120.5 |
C2 |
C1 |
H11 |
119.3 |
119.7 |
C1 |
C2 |
C3 |
115.9 |
120.7 |
C1 |
C2 |
O4 |
127.1 |
119.7 |
C6 |
C1 |
H11 |
119.1 |
119.7 |
C1 |
C6 |
C5 |
116.9 |
118.6 |
C1 |
C6 |
O1 |
122.8 |
118.6 |
C3 |
C2 |
O4 |
110.0 |
119.6 |
C2 |
C3 |
C4 |
121.7 |
119.8 |
C2 |
C3 |
H31 |
119.9 |
120.1 |
C2 |
O4 |
H41 |
127.0 |
106.8 |
C4 |
C3 |
H31 |
118.4 |
120.1 |
C3 |
C4 |
C5 |
114.9 |
119.6 |
C3 |
C4 |
O5 |
121.7 |
120.2 |
C5 |
C4 |
O5 |
122.7 |
120.2 |
C4 |
C5 |
C6 |
123.1 |
120.6 |
C4 |
C5 |
C7 |
116.8 |
120.0 |
C4 |
O5 |
H51 |
121.7 |
106.8 |
C6 |
C5 |
C7 |
117.5 |
119.3 |
C5 |
C6 |
O1 |
120.3 |
122.7 |
C5 |
C7 |
C8 |
116.8 |
115.2 |
C5 |
C7 |
O2 |
121.5 |
122.4 |
C6 |
O1 |
C9 |
118.6 |
111.3 |
C8 |
C7 |
O2 |
121.6 |
122.4 |
C7 |
C8 |
C9 |
113.9 |
105.9 |
C7 |
C8 |
H81 |
110.6 |
110.2 |
C7 |
C8 |
H82 |
110.6 |
110.2 |
C9 |
C8 |
H81 |
110.7 |
110.1 |
C9 |
C8 |
H82 |
110.6 |
110.1 |
C8 |
C9 |
O1 |
107.7 |
109.8 |
C8 |
C9 |
C10 |
107.8 |
109.4 |
C8 |
C9 |
H9 |
111.3 |
109.3 |
H81 |
C8 |
H82 |
99.6 |
110.2 |
O1 |
C9 |
C10 |
108.4 |
109.4 |
O1 |
C9 |
H9 |
110.8 |
109.4 |
C10 |
C9 |
H9 |
110.7 |
109.5 |
C9 |
C10 |
C11 |
127.2 |
120.0 |
C9 |
C10 |
C15 |
114.0 |
119.9 |
C11 |
C10 |
C15 |
118.7 |
120.1 |
C10 |
C11 |
C12 |
121.5 |
120.1 |
C10 |
C11 |
H111 |
118.4 |
120.0 |
C10 |
C15 |
C14 |
114.5 |
120.0 |
C10 |
C15 |
H151 |
123.3 |
120.0 |
C12 |
C11 |
H111 |
120.1 |
120.0 |
C11 |
C12 |
C13 |
116.9 |
119.9 |
C11 |
C12 |
H121 |
121.9 |
120.1 |
C13 |
C12 |
H121 |
121.2 |
120.0 |
C12 |
C13 |
C14 |
115.7 |
119.9 |
C12 |
C13 |
O3 |
120.0 |
120.0 |
C14 |
C13 |
O3 |
118.9 |
120.1 |
C13 |
C14 |
C15 |
119.9 |
120.0 |
C13 |
C14 |
H141 |
120.4 |
120.1 |
C13 |
O3 |
HO3 |
120.0 |
106.8 |
C15 |
C14 |
H141 |
119.7 |
120.0 |
C14 |
C15 |
H151 |
122.3 |
120.0 |
Torsion Angles for NAR
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H11 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
355.4 |
359.1 |
C2 |
C1 |
C6 |
O1 |
174.0 |
178.0 |
C3 |
C2 |
C1 |
O4 |
147.6 |
180.1 |
C1 |
C2 |
C3 |
C4 |
27.9 |
0.6 |
C1 |
C2 |
C3 |
H31 |
207.9 |
180.5 |
C1 |
C2 |
O4 |
H41 |
179.9 |
270.1 |
C2 |
C1 |
C6 |
H11 |
180.0 |
180.0 |
C6 |
C1 |
C2 |
C3 |
347.7 |
359.8 |
C6 |
C1 |
C2 |
O4 |
200.1 |
179.7 |
C4 |
C5 |
C6 |
C1 |
8.0 |
1.7 |
C1 |
C6 |
C5 |
C7 |
169.0 |
182.1 |
C5 |
C6 |
C1 |
O1 |
181.4 |
181.1 |
C1 |
C6 |
O1 |
C9 |
152.4 |
149.7 |
C2 |
C1 |
H11 |
C6 |
180.0 |
180.0 |
H11 |
C1 |
C2 |
C3 |
167.7 |
179.8 |
H11 |
C1 |
C2 |
O4 |
20.1 |
359.7 |
H11 |
C1 |
C6 |
C5 |
175.4 |
179.1 |
H11 |
C1 |
C6 |
O1 |
354.1 |
358.0 |
C3 |
C2 |
C1 |
C6 |
347.7 |
359.8 |
C3 |
C2 |
C1 |
H11 |
167.7 |
179.8 |
C1 |
C2 |
C3 |
O4 |
207.1 |
179.9 |
C3 |
C2 |
O4 |
H41 |
30.8 |
90.0 |
C4 |
C3 |
C2 |
H31 |
180.0 |
180.1 |
C2 |
C3 |
C4 |
C5 |
335.4 |
0.2 |
C2 |
C3 |
C4 |
O5 |
164.6 |
180.3 |
O4 |
C2 |
C1 |
C6 |
200.1 |
179.7 |
O4 |
C2 |
C1 |
H11 |
20.1 |
359.7 |
C1 |
C2 |
O4 |
C3 |
149.1 |
180.1 |
O4 |
C2 |
C3 |
C4 |
180.8 |
180.7 |
O4 |
C2 |
C3 |
H31 |
0.9 |
0.6 |
C4 |
C3 |
C2 |
O4 |
180.8 |
180.7 |
C2 |
C3 |
C4 |
H31 |
180.0 |
179.9 |
C5 |
C4 |
C3 |
O5 |
170.8 |
179.9 |
C3 |
C4 |
C5 |
C6 |
6.0 |
358.6 |
C3 |
C4 |
C5 |
C7 |
204.9 |
178.3 |
C3 |
C4 |
O5 |
H51 |
180.0 |
269.9 |
H31 |
C3 |
C2 |
O4 |
0.9 |
0.6 |
C2 |
C3 |
H31 |
C4 |
180.0 |
180.1 |
H31 |
C3 |
C4 |
C5 |
155.4 |
180.3 |
H31 |
C3 |
C4 |
O5 |
344.5 |
0.4 |
C1 |
C6 |
C5 |
C4 |
8.0 |
1.7 |
C5 |
C4 |
C3 |
H31 |
155.4 |
180.3 |
C3 |
C4 |
C5 |
O5 |
189.3 |
180.1 |
C5 |
C4 |
O5 |
H51 |
9.9 |
90.0 |
C6 |
C5 |
C4 |
C7 |
161.2 |
180.4 |
C4 |
C5 |
C6 |
O1 |
189.3 |
182.8 |
C4 |
C5 |
C7 |
C8 |
177.1 |
173.0 |
C4 |
C5 |
C7 |
O2 |
0.8 |
353.0 |
O5 |
C4 |
C3 |
H31 |
344.5 |
0.4 |
C3 |
C4 |
O5 |
C5 |
170.1 |
179.9 |
O5 |
C4 |
C5 |
C6 |
176.8 |
178.5 |
O5 |
C4 |
C5 |
C7 |
15.6 |
358.2 |
C5 |
C6 |
C1 |
H11 |
175.4 |
179.1 |
C1 |
C6 |
C5 |
O1 |
178.7 |
178.9 |
C6 |
C5 |
C4 |
O5 |
176.8 |
178.5 |
C4 |
C5 |
C6 |
C7 |
199.0 |
179.6 |
C6 |
C5 |
C7 |
C8 |
14.8 |
352.7 |
C6 |
C5 |
C7 |
O2 |
198.5 |
172.7 |
C5 |
C6 |
O1 |
C9 |
330.9 |
328.6 |
C7 |
C5 |
C4 |
O5 |
15.6 |
358.2 |
C4 |
C5 |
C7 |
C6 |
162.3 |
180.4 |
C7 |
C5 |
C6 |
O1 |
350.3 |
3.2 |
C8 |
C7 |
C5 |
O2 |
176.3 |
180.0 |
C5 |
C7 |
C8 |
C9 |
14.4 |
35.7 |
C5 |
C7 |
C8 |
H81 |
139.7 |
276.6 |
C5 |
C7 |
C8 |
H82 |
249.1 |
154.8 |
O1 |
C6 |
C1 |
H11 |
354.1 |
358.0 |
C1 |
C6 |
O1 |
C5 |
181.4 |
181.1 |
O1 |
C6 |
C5 |
C7 |
350.3 |
3.2 |
C8 |
C9 |
O1 |
C6 |
56.9 |
63.0 |
C6 |
O1 |
C9 |
C10 |
173.2 |
183.1 |
C6 |
O1 |
C9 |
H9 |
294.9 |
303.0 |
C5 |
C7 |
C8 |
O2 |
183.7 |
180.0 |
C9 |
C8 |
C7 |
H81 |
234.7 |
119.1 |
C9 |
C8 |
C7 |
H82 |
125.3 |
240.9 |
C7 |
C8 |
C9 |
O1 |
312.4 |
295.5 |
C7 |
C8 |
C9 |
C10 |
195.7 |
175.5 |
C7 |
C8 |
C9 |
H9 |
74.1 |
55.6 |
H81 |
C8 |
C7 |
H82 |
250.6 |
121.8 |
C5 |
C7 |
O2 |
C8 |
176.1 |
180.0 |
O2 |
C7 |
C8 |
C9 |
190.7 |
215.6 |
O2 |
C7 |
C8 |
H81 |
316.0 |
96.6 |
O2 |
C7 |
C8 |
H82 |
65.4 |
334.8 |
C6 |
O1 |
C9 |
C8 |
56.9 |
63.0 |
C9 |
C8 |
C7 |
O2 |
190.7 |
215.6 |
C7 |
C8 |
C9 |
H81 |
125.3 |
240.9 |
C7 |
C8 |
C9 |
H82 |
234.7 |
119.1 |
H81 |
C8 |
C9 |
H82 |
109.4 |
238.2 |
O1 |
C9 |
C8 |
C10 |
116.7 |
120.1 |
O1 |
C9 |
C8 |
H9 |
238.3 |
240.0 |
C10 |
C9 |
C8 |
H9 |
121.6 |
119.9 |
C8 |
C9 |
C10 |
C11 |
93.4 |
90.2 |
C8 |
C9 |
C10 |
C15 |
277.2 |
270.2 |
H81 |
C8 |
C7 |
O2 |
316.0 |
96.6 |
C7 |
C8 |
H81 |
C9 |
232.9 |
116.5 |
C7 |
C8 |
H81 |
H82 |
116.4 |
238.2 |
C9 |
C8 |
H81 |
H82 |
243.5 |
121.7 |
H81 |
C8 |
C9 |
O1 |
187.1 |
54.6 |
H81 |
C8 |
C9 |
C10 |
70.4 |
294.6 |
H81 |
C8 |
C9 |
H9 |
308.8 |
174.7 |
H82 |
C8 |
C7 |
O2 |
65.4 |
334.8 |
C7 |
C8 |
H82 |
C9 |
127.1 |
243.5 |
C7 |
C8 |
H82 |
H81 |
243.6 |
121.8 |
C9 |
C8 |
H82 |
H81 |
116.5 |
238.3 |
H82 |
C8 |
C9 |
O1 |
77.7 |
176.4 |
H82 |
C8 |
C9 |
C10 |
321.0 |
56.3 |
H82 |
C8 |
C9 |
H9 |
199.4 |
296.4 |
O1 |
C9 |
C8 |
H81 |
187.1 |
54.6 |
O1 |
C9 |
C8 |
H82 |
77.7 |
176.4 |
C8 |
C9 |
O1 |
C10 |
243.7 |
239.9 |
C8 |
C9 |
O1 |
H9 |
122.0 |
120.0 |
C10 |
C9 |
O1 |
H9 |
238.3 |
240.1 |
O1 |
C9 |
C10 |
C11 |
337.1 |
329.8 |
O1 |
C9 |
C10 |
C15 |
160.8 |
149.8 |
C10 |
C9 |
C8 |
H81 |
70.4 |
294.6 |
C10 |
C9 |
C8 |
H82 |
321.0 |
56.3 |
C8 |
C9 |
C10 |
O1 |
116.3 |
120.4 |
C8 |
C9 |
C10 |
H9 |
238.0 |
240.2 |
O1 |
C9 |
C10 |
H9 |
121.7 |
119.8 |
C11 |
C10 |
C9 |
C15 |
176.2 |
180.0 |
C9 |
C10 |
C11 |
C12 |
171.8 |
180.0 |
C9 |
C10 |
C11 |
H111 |
351.7 |
0.1 |
C9 |
C10 |
C15 |
C14 |
201.8 |
179.7 |
C9 |
C10 |
C15 |
H151 |
21.8 |
360.0 |
H9 |
C9 |
C8 |
H81 |
308.8 |
174.7 |
H9 |
C9 |
C8 |
H82 |
199.4 |
296.4 |
C8 |
C9 |
H9 |
O1 |
240.1 |
239.7 |
C8 |
C9 |
H9 |
C10 |
119.9 |
119.9 |
O1 |
C9 |
H9 |
C10 |
239.7 |
240.2 |
H9 |
C9 |
C10 |
C11 |
215.3 |
210.0 |
H9 |
C9 |
C10 |
C15 |
39.1 |
30.0 |
C11 |
C10 |
C9 |
H9 |
215.3 |
210.0 |
C9 |
C10 |
C11 |
C15 |
183.9 |
180.0 |
C11 |
C10 |
C15 |
C14 |
25.2 |
359.7 |
C11 |
C10 |
C15 |
H151 |
205.3 |
180.0 |
C12 |
C11 |
C10 |
H111 |
180.0 |
179.9 |
C10 |
C11 |
C12 |
C13 |
10.8 |
0.1 |
C10 |
C11 |
C12 |
H121 |
190.7 |
180.1 |
C15 |
C10 |
C9 |
H9 |
39.1 |
30.0 |
C9 |
C10 |
C15 |
C11 |
176.6 |
180.0 |
C15 |
C10 |
C11 |
C12 |
347.9 |
360.0 |
C15 |
C10 |
C11 |
H111 |
167.8 |
180.0 |
C13 |
C14 |
C15 |
C10 |
320.4 |
0.5 |
C10 |
C15 |
C14 |
H141 |
140.5 |
180.0 |
C14 |
C15 |
C10 |
H151 |
179.9 |
179.8 |
C12 |
C11 |
C10 |
C15 |
347.9 |
360.0 |
C10 |
C11 |
C12 |
H111 |
180.0 |
180.1 |
C13 |
C12 |
C11 |
H121 |
180.1 |
180.0 |
C11 |
C12 |
C13 |
C14 |
337.1 |
0.2 |
C11 |
C12 |
C13 |
O3 |
183.3 |
180.0 |
H111 |
C11 |
C10 |
C15 |
167.8 |
180.0 |
C10 |
C11 |
H111 |
C12 |
180.0 |
179.9 |
H111 |
C11 |
C12 |
C13 |
190.9 |
180.0 |
H111 |
C11 |
C12 |
H121 |
10.8 |
360.0 |
C13 |
C12 |
C11 |
H111 |
190.9 |
180.0 |
C11 |
C12 |
C13 |
H121 |
179.9 |
180.0 |
C14 |
C13 |
C12 |
O3 |
153.8 |
180.2 |
C12 |
C13 |
C14 |
C15 |
38.9 |
359.5 |
C12 |
C13 |
C14 |
H141 |
218.8 |
180.0 |
C12 |
C13 |
O3 |
HO3 |
180.0 |
89.9 |
H121 |
C12 |
C11 |
H111 |
10.8 |
360.0 |
C11 |
C12 |
H121 |
C13 |
180.1 |
180.0 |
H121 |
C12 |
C13 |
C14 |
157.2 |
180.2 |
H121 |
C12 |
C13 |
O3 |
3.3 |
360.0 |
C10 |
C15 |
C14 |
C13 |
320.4 |
0.5 |
C14 |
C13 |
C12 |
H121 |
157.2 |
180.2 |
C12 |
C13 |
C14 |
O3 |
205.9 |
179.8 |
C14 |
C13 |
O3 |
HO3 |
27.0 |
269.7 |
C15 |
C14 |
C13 |
H141 |
180.0 |
179.4 |
C13 |
C14 |
C15 |
H151 |
140.3 |
180.3 |
O3 |
C13 |
C12 |
H121 |
3.3 |
360.0 |
C12 |
C13 |
O3 |
C14 |
153.0 |
180.2 |
O3 |
C13 |
C14 |
C15 |
193.0 |
179.7 |
O3 |
C13 |
C14 |
H141 |
12.9 |
0.3 |
C10 |
C15 |
C14 |
H151 |
180.1 |
180.2 |
C15 |
C14 |
C13 |
O3 |
193.0 |
179.7 |
C13 |
C14 |
C15 |
H141 |
180.0 |
180.6 |
H141 |
C14 |
C13 |
O3 |
12.9 |
0.3 |
C13 |
C14 |
H141 |
C15 |
180.0 |
179.4 |
H141 |
C14 |
C15 |
H151 |
320.4 |
359.7 |
C10 |
C15 |
H151 |
C14 |
179.9 |
179.8 |
H151 |
C15 |
C14 |
H141 |
320.4 |
359.7 |