PDB Chemical Component IVA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for IVA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA |
CB |
1.537 |
1.530 |
| CA |
C |
1.523 |
1.507 |
| CA |
HA1 |
1.100 |
1.090 |
| CA |
HA2 |
1.100 |
1.090 |
| CB |
CG1 |
1.524 |
1.530 |
| CB |
CG2 |
1.525 |
1.529 |
| CB |
HB |
1.099 |
1.091 |
| CG1 |
HG11 |
1.100 |
1.090 |
| CG1 |
HG12 |
1.100 |
1.091 |
| CG1 |
HG13 |
1.100 |
1.091 |
| CG2 |
HG21 |
1.100 |
1.090 |
| CG2 |
HG22 |
1.100 |
1.090 |
| CG2 |
HG23 |
1.100 |
1.090 |
| C |
O |
1.249 |
1.208 |
| C |
OXT |
1.248 |
1.342 |
| OXT |
HXT |
0.950 |
0.968 |
Bond Angles for IVA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
C |
112.8 |
109.5 |
| CB |
CA |
HA1 |
108.3 |
109.5 |
| CB |
CA |
HA2 |
108.4 |
109.4 |
| CA |
CB |
CG1 |
110.3 |
109.5 |
| CA |
CB |
CG2 |
110.6 |
109.5 |
| CA |
CB |
HB |
108.7 |
109.5 |
| C |
CA |
HA1 |
108.4 |
109.5 |
| C |
CA |
HA2 |
108.3 |
109.4 |
| CA |
C |
O |
118.8 |
120.0 |
| CA |
C |
OXT |
118.4 |
120.0 |
| HA1 |
CA |
HA2 |
110.6 |
109.5 |
| CG1 |
CB |
CG2 |
111.0 |
109.5 |
| CG1 |
CB |
HB |
108.3 |
109.5 |
| CB |
CG1 |
HG11 |
109.5 |
109.5 |
| CB |
CG1 |
HG12 |
109.5 |
109.5 |
| CB |
CG1 |
HG13 |
109.5 |
109.5 |
| CG2 |
CB |
HB |
108.0 |
109.5 |
| CB |
CG2 |
HG21 |
109.5 |
109.5 |
| CB |
CG2 |
HG22 |
109.5 |
109.5 |
| CB |
CG2 |
HG23 |
109.5 |
109.5 |
| HG11 |
CG1 |
HG12 |
109.4 |
109.5 |
| HG11 |
CG1 |
HG13 |
109.5 |
109.5 |
| HG12 |
CG1 |
HG13 |
109.5 |
109.5 |
| HG21 |
CG2 |
HG22 |
109.5 |
109.4 |
| HG21 |
CG2 |
HG23 |
109.5 |
109.5 |
| HG22 |
CG2 |
HG23 |
109.5 |
109.5 |
| O |
C |
OXT |
122.5 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
Torsion Angles for IVA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
HA1 |
240.0 |
240.0 |
| C |
CA |
CB |
HA2 |
120.0 |
120.0 |
| CB |
CA |
C |
O |
277.0 |
0.0 |
| CB |
CA |
C |
OXT |
90.9 |
180.0 |
| HA1 |
CA |
CB |
HA2 |
240.0 |
240.0 |
| CG1 |
CB |
CA |
CG2 |
123.1 |
240.0 |
| CG1 |
CB |
CA |
HB |
241.5 |
120.0 |
| CA |
CB |
CG1 |
HG11 |
180.0 |
180.0 |
| CA |
CB |
CG1 |
HG12 |
300.0 |
300.0 |
| CA |
CB |
CG1 |
HG13 |
60.0 |
60.0 |
| CG2 |
CB |
CA |
HB |
118.4 |
240.0 |
| CA |
CB |
CG2 |
HG21 |
180.0 |
60.0 |
| CA |
CB |
CG2 |
HG22 |
300.0 |
180.0 |
| CA |
CB |
CG2 |
HG23 |
60.0 |
300.0 |
| CB |
CA |
C |
HA1 |
120.0 |
120.0 |
| CB |
CA |
C |
HA2 |
240.0 |
240.1 |
| C |
CA |
CB |
CG1 |
204.9 |
65.0 |
| C |
CA |
CB |
CG2 |
81.8 |
185.0 |
| C |
CA |
CB |
HB |
323.5 |
305.0 |
| HA1 |
CA |
C |
HA2 |
120.0 |
120.0 |
| O |
C |
CA |
OXT |
186.1 |
180.0 |
| CA |
C |
OXT |
HXT |
186.4 |
180.0 |
| CB |
CA |
HA1 |
C |
237.3 |
240.0 |
| CB |
CA |
HA1 |
HA2 |
118.7 |
120.0 |
| HA1 |
CA |
CB |
CG1 |
324.9 |
185.0 |
| HA1 |
CA |
CB |
CG2 |
201.8 |
305.0 |
| HA1 |
CA |
CB |
HB |
83.4 |
65.0 |
| C |
CA |
HA1 |
HA2 |
241.4 |
240.0 |
| HA1 |
CA |
C |
O |
157.0 |
240.0 |
| HA1 |
CA |
C |
OXT |
330.9 |
60.0 |
| CB |
CA |
HA2 |
C |
122.8 |
120.0 |
| CB |
CA |
HA2 |
HA1 |
241.4 |
240.0 |
| HA2 |
CA |
CB |
CG1 |
84.9 |
305.0 |
| HA2 |
CA |
CB |
CG2 |
321.8 |
65.0 |
| HA2 |
CA |
CB |
HB |
203.5 |
185.0 |
| C |
CA |
HA2 |
HA1 |
118.6 |
120.0 |
| HA2 |
CA |
C |
O |
37.0 |
120.0 |
| HA2 |
CA |
C |
OXT |
210.9 |
300.0 |
| CG1 |
CB |
CA |
C |
204.9 |
65.0 |
| CG1 |
CB |
CA |
HA1 |
324.9 |
185.0 |
| CG1 |
CB |
CA |
HA2 |
84.9 |
305.0 |
| CA |
CB |
CG1 |
CG2 |
237.1 |
120.0 |
| CA |
CB |
CG1 |
HB |
118.8 |
240.0 |
| CG2 |
CB |
CG1 |
HB |
241.7 |
120.0 |
| CG1 |
CB |
CG2 |
HG21 |
57.3 |
180.0 |
| CG1 |
CB |
CG2 |
HG22 |
177.3 |
300.0 |
| CG1 |
CB |
CG2 |
HG23 |
297.3 |
60.0 |
| HG11 |
CG1 |
CB |
HG12 |
240.0 |
240.0 |
| HG11 |
CG1 |
CB |
HG13 |
120.0 |
120.0 |
| HG12 |
CG1 |
CB |
HG13 |
240.0 |
240.0 |
| CG2 |
CB |
CA |
C |
81.8 |
185.0 |
| CG2 |
CB |
CA |
HA1 |
201.8 |
305.0 |
| CG2 |
CB |
CA |
HA2 |
321.8 |
65.0 |
| CA |
CB |
CG2 |
CG1 |
122.7 |
240.0 |
| CA |
CB |
CG2 |
HB |
241.2 |
120.0 |
| CG1 |
CB |
CG2 |
HB |
118.5 |
240.0 |
| CG2 |
CB |
CG1 |
HG11 |
302.9 |
60.0 |
| CG2 |
CB |
CG1 |
HG12 |
62.9 |
180.0 |
| CG2 |
CB |
CG1 |
HG13 |
182.9 |
300.0 |
| HG21 |
CG2 |
CB |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
CB |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HG23 |
240.0 |
240.0 |
| HB |
CB |
CA |
C |
323.5 |
305.0 |
| HB |
CB |
CA |
HA1 |
83.4 |
65.0 |
| HB |
CB |
CA |
HA2 |
203.5 |
185.0 |
| CA |
CB |
HB |
CG1 |
240.2 |
120.0 |
| CA |
CB |
HB |
CG2 |
120.0 |
240.0 |
| CG1 |
CB |
HB |
CG2 |
239.8 |
120.0 |
| HB |
CB |
CG1 |
HG11 |
61.2 |
300.0 |
| HB |
CB |
CG1 |
HG12 |
181.2 |
60.0 |
| HB |
CB |
CG1 |
HG13 |
301.2 |
180.0 |
| HB |
CB |
CG2 |
HG21 |
298.8 |
300.0 |
| HB |
CB |
CG2 |
HG22 |
58.8 |
60.0 |
| HB |
CB |
CG2 |
HG23 |
178.8 |
180.0 |
| HG11 |
CG1 |
CB |
CG2 |
302.9 |
60.0 |
| HG11 |
CG1 |
CB |
HB |
61.2 |
300.0 |
| CB |
CG1 |
HG11 |
HG12 |
120.0 |
120.0 |
| CB |
CG1 |
HG11 |
HG13 |
240.0 |
240.0 |
| HG12 |
CG1 |
HG11 |
HG13 |
120.0 |
120.0 |
| HG12 |
CG1 |
CB |
CG2 |
62.9 |
180.0 |
| HG12 |
CG1 |
CB |
HB |
181.2 |
60.0 |
| CB |
CG1 |
HG12 |
HG11 |
240.0 |
240.0 |
| CB |
CG1 |
HG12 |
HG13 |
120.0 |
120.0 |
| HG11 |
CG1 |
HG12 |
HG13 |
240.0 |
240.0 |
| HG13 |
CG1 |
CB |
CG2 |
182.9 |
300.0 |
| HG13 |
CG1 |
CB |
HB |
301.2 |
180.0 |
| CB |
CG1 |
HG13 |
HG11 |
120.0 |
120.0 |
| CB |
CG1 |
HG13 |
HG12 |
240.0 |
240.0 |
| HG11 |
CG1 |
HG13 |
HG12 |
120.0 |
120.0 |
| HG21 |
CG2 |
CB |
HB |
298.8 |
300.0 |
| CB |
CG2 |
HG21 |
HG22 |
120.0 |
120.0 |
| CB |
CG2 |
HG21 |
HG23 |
240.0 |
240.0 |
| HG22 |
CG2 |
HG21 |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HB |
58.8 |
60.0 |
| CB |
CG2 |
HG22 |
HG21 |
240.0 |
240.0 |
| CB |
CG2 |
HG22 |
HG23 |
120.0 |
120.0 |
| HG21 |
CG2 |
HG22 |
HG23 |
240.0 |
240.0 |
| HG23 |
CG2 |
CB |
HB |
178.8 |
180.0 |
| CB |
CG2 |
HG23 |
HG21 |
120.0 |
120.0 |
| CB |
CG2 |
HG23 |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
HG23 |
HG22 |
120.0 |
120.0 |
| O |
C |
CA |
HA1 |
157.0 |
240.0 |
| O |
C |
CA |
HA2 |
37.0 |
120.0 |
| CA |
C |
O |
OXT |
173.6 |
180.0 |
| O |
C |
OXT |
HXT |
360.0 |
0.0 |
| OXT |
C |
CA |
HA1 |
330.9 |
60.0 |
| OXT |
C |
CA |
HA2 |
210.9 |
300.0 |
| CA |
C |
OXT |
O |
186.4 |
180.0 |