PDB Chemical Component HSE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HSE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.502 |
1.469 |
| N |
H |
1.020 |
1.009 |
| N |
H2 |
1.020 |
1.008 |
| CA |
C |
1.534 |
1.506 |
| CA |
C3 |
1.558 |
1.529 |
| CA |
HA |
1.115 |
1.090 |
| C |
O |
1.255 |
1.208 |
| C |
OXT |
1.261 |
1.342 |
| C3 |
C4 |
1.525 |
1.530 |
| C3 |
H31 |
1.115 |
1.090 |
| C3 |
H32 |
1.115 |
1.090 |
| OXT |
HXT |
0.949 |
0.966 |
| C4 |
O3 |
1.432 |
1.428 |
| C4 |
H41 |
1.115 |
1.090 |
| C4 |
H42 |
1.115 |
1.091 |
| O3 |
HO3 |
0.949 |
0.966 |
Bond Angles for HSE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
106.3 |
106.7 |
| CA |
N |
H2 |
113.4 |
106.7 |
| N |
CA |
C |
106.3 |
109.5 |
| N |
CA |
C3 |
106.4 |
109.5 |
| N |
CA |
HA |
115.9 |
109.5 |
| H |
N |
H2 |
113.4 |
106.7 |
| C |
CA |
C3 |
116.0 |
109.5 |
| C |
CA |
HA |
106.4 |
109.4 |
| CA |
C |
O |
119.8 |
120.0 |
| CA |
C |
OXT |
113.5 |
120.1 |
| C3 |
CA |
HA |
106.3 |
109.5 |
| CA |
C3 |
C4 |
114.2 |
109.5 |
| CA |
C3 |
H31 |
110.4 |
109.5 |
| CA |
C3 |
H32 |
110.4 |
109.4 |
| O |
C |
OXT |
126.7 |
119.9 |
| C |
OXT |
HXT |
113.5 |
120.0 |
| C4 |
C3 |
H31 |
110.5 |
109.5 |
| C4 |
C3 |
H32 |
110.5 |
109.4 |
| C3 |
C4 |
O3 |
112.8 |
109.5 |
| C3 |
C4 |
H41 |
111.0 |
109.5 |
| C3 |
C4 |
H42 |
111.0 |
109.4 |
| H31 |
C3 |
H32 |
99.8 |
109.5 |
| O3 |
C4 |
H41 |
111.0 |
109.5 |
| O3 |
C4 |
H42 |
111.0 |
109.5 |
| C4 |
O3 |
HO3 |
112.8 |
106.8 |
| H41 |
C4 |
H42 |
99.3 |
109.5 |
Torsion Angles for HSE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.3 |
113.7 |
| C |
CA |
N |
C3 |
124.2 |
120.0 |
| C |
CA |
N |
HA |
242.0 |
240.0 |
| N |
CA |
C |
O |
179.5 |
330.0 |
| N |
CA |
C |
OXT |
359.8 |
150.0 |
| C3 |
CA |
N |
HA |
117.9 |
120.0 |
| N |
CA |
C3 |
C4 |
180.4 |
300.0 |
| N |
CA |
C3 |
H31 |
305.7 |
60.0 |
| N |
CA |
C3 |
H32 |
55.1 |
180.0 |
| CA |
N |
H |
H2 |
234.7 |
246.2 |
| H |
N |
CA |
C |
180.0 |
173.8 |
| H |
N |
CA |
C3 |
55.9 |
53.8 |
| H |
N |
CA |
HA |
298.0 |
293.8 |
| CA |
N |
H2 |
H |
121.4 |
113.8 |
| H2 |
N |
CA |
C |
54.7 |
60.1 |
| H2 |
N |
CA |
C3 |
290.6 |
300.0 |
| H2 |
N |
CA |
HA |
172.7 |
180.0 |
| C |
CA |
N |
H |
180.0 |
173.8 |
| C |
CA |
N |
H2 |
54.7 |
60.1 |
| N |
CA |
C |
C3 |
242.0 |
240.0 |
| N |
CA |
C |
HA |
124.1 |
120.0 |
| C3 |
CA |
C |
HA |
242.1 |
240.0 |
| C |
CA |
C3 |
C4 |
62.5 |
180.0 |
| C |
CA |
C3 |
H31 |
187.7 |
300.0 |
| C |
CA |
C3 |
H32 |
297.1 |
60.0 |
| O |
C |
CA |
OXT |
179.7 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| C3 |
CA |
N |
H |
55.9 |
53.8 |
| C3 |
CA |
N |
H2 |
290.6 |
300.0 |
| N |
CA |
C3 |
C |
117.9 |
120.0 |
| N |
CA |
C3 |
HA |
235.9 |
240.0 |
| C |
CA |
C3 |
HA |
118.0 |
120.0 |
| C3 |
CA |
C |
O |
297.5 |
90.0 |
| C3 |
CA |
C |
OXT |
117.8 |
270.0 |
| C4 |
C3 |
CA |
H31 |
234.7 |
240.0 |
| C4 |
C3 |
CA |
H32 |
125.3 |
120.0 |
| CA |
C3 |
C4 |
O3 |
180.0 |
180.0 |
| CA |
C3 |
C4 |
H41 |
305.3 |
300.1 |
| CA |
C3 |
C4 |
H42 |
54.8 |
60.0 |
| H31 |
C3 |
CA |
H32 |
250.6 |
240.0 |
| HA |
CA |
N |
H |
298.0 |
293.8 |
| HA |
CA |
N |
H2 |
172.7 |
180.0 |
| N |
CA |
HA |
C |
242.1 |
240.0 |
| N |
CA |
HA |
C3 |
117.9 |
120.0 |
| C |
CA |
HA |
C3 |
235.8 |
240.0 |
| HA |
CA |
C |
O |
55.4 |
210.0 |
| HA |
CA |
C |
OXT |
235.7 |
30.0 |
| HA |
CA |
C3 |
C4 |
304.5 |
60.0 |
| HA |
CA |
C3 |
H31 |
69.7 |
180.0 |
| HA |
CA |
C3 |
H32 |
179.2 |
300.0 |
| O |
C |
CA |
C3 |
297.5 |
90.0 |
| O |
C |
CA |
HA |
55.4 |
210.0 |
| CA |
C |
O |
OXT |
180.3 |
180.0 |
| O |
C |
OXT |
HXT |
0.3 |
360.0 |
| OXT |
C |
CA |
C3 |
117.8 |
270.0 |
| OXT |
C |
CA |
HA |
235.7 |
30.0 |
| CA |
C |
OXT |
O |
179.7 |
180.0 |
| C4 |
C3 |
CA |
HA |
304.5 |
60.0 |
| CA |
C3 |
C4 |
H31 |
125.2 |
120.0 |
| CA |
C3 |
C4 |
H32 |
234.7 |
240.0 |
| H31 |
C3 |
C4 |
H32 |
109.5 |
120.0 |
| O3 |
C4 |
C3 |
H41 |
234.7 |
239.9 |
| O3 |
C4 |
C3 |
H42 |
125.3 |
120.0 |
| C3 |
C4 |
O3 |
HO3 |
180.0 |
180.0 |
| H41 |
C4 |
C3 |
H42 |
250.6 |
240.1 |
| H31 |
C3 |
CA |
HA |
69.7 |
180.0 |
| CA |
C3 |
H31 |
C4 |
232.6 |
240.0 |
| CA |
C3 |
H31 |
H32 |
116.3 |
120.0 |
| C4 |
C3 |
H31 |
H32 |
243.6 |
240.0 |
| H31 |
C3 |
C4 |
O3 |
54.8 |
60.0 |
| H31 |
C3 |
C4 |
H41 |
180.1 |
180.0 |
| H31 |
C3 |
C4 |
H42 |
289.5 |
300.0 |
| H32 |
C3 |
CA |
HA |
179.2 |
300.0 |
| CA |
C3 |
H32 |
C4 |
127.4 |
120.0 |
| CA |
C3 |
H32 |
H31 |
243.7 |
240.0 |
| C4 |
C3 |
H32 |
H31 |
116.3 |
120.0 |
| H32 |
C3 |
C4 |
O3 |
305.3 |
300.0 |
| H32 |
C3 |
C4 |
H41 |
70.6 |
60.0 |
| H32 |
C3 |
C4 |
H42 |
180.0 |
180.0 |
| O3 |
C4 |
C3 |
H31 |
54.8 |
60.0 |
| O3 |
C4 |
C3 |
H32 |
305.3 |
300.0 |
| C3 |
C4 |
O3 |
H41 |
125.3 |
120.1 |
| C3 |
C4 |
O3 |
H42 |
234.8 |
240.1 |
| H41 |
C4 |
O3 |
H42 |
109.5 |
120.0 |
| H41 |
C4 |
C3 |
H31 |
180.1 |
180.0 |
| H41 |
C4 |
C3 |
H32 |
70.6 |
60.0 |
| C3 |
C4 |
H41 |
O3 |
233.7 |
239.9 |
| C3 |
C4 |
H41 |
H42 |
116.8 |
119.9 |
| O3 |
C4 |
H41 |
H42 |
243.1 |
240.0 |
| H41 |
C4 |
O3 |
HO3 |
54.8 |
60.0 |
| H42 |
C4 |
C3 |
H31 |
289.5 |
300.0 |
| H42 |
C4 |
C3 |
H32 |
180.0 |
180.0 |
| C3 |
C4 |
H42 |
O3 |
126.3 |
120.0 |
| C3 |
C4 |
H42 |
H41 |
243.2 |
240.0 |
| O3 |
C4 |
H42 |
H41 |
116.9 |
120.0 |
| H42 |
C4 |
O3 |
HO3 |
305.3 |
300.0 |
| HO3 |
O3 |
C4 |
H41 |
54.8 |
60.0 |
| HO3 |
O3 |
C4 |
H42 |
305.3 |
300.0 |