PDB Chemical Component HOC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for HOC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C8 |
C7 |
1.528 |
1.531 |
C8 |
H81 |
1.100 |
1.089 |
C8 |
H82 |
1.100 |
1.090 |
C8 |
H83 |
1.100 |
1.091 |
C7 |
C6 |
1.522 |
1.530 |
C7 |
H71 |
1.100 |
1.089 |
C7 |
H72 |
1.100 |
1.090 |
OH |
C2 |
1.411 |
1.430 |
OH |
HOH |
0.950 |
0.967 |
C1 |
C2 |
1.585 |
1.507 |
C1 |
O1A |
1.377 |
1.342 |
C1 |
O1B |
1.231 |
1.208 |
C2 |
C3 |
1.556 |
1.530 |
C2 |
H2 |
1.099 |
1.090 |
C3 |
C4 |
1.549 |
1.530 |
C3 |
H31 |
1.100 |
1.090 |
C3 |
H32 |
1.100 |
1.089 |
C4 |
C5 |
1.561 |
1.530 |
C4 |
H41 |
1.100 |
1.090 |
C4 |
H42 |
1.100 |
1.090 |
C5 |
C6 |
1.558 |
1.530 |
C5 |
H51 |
1.100 |
1.090 |
C5 |
H52 |
1.100 |
1.090 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.090 |
O1A |
H1A |
0.950 |
0.967 |
Bond Angles for HOC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
C8 |
H81 |
109.4 |
109.5 |
C7 |
C8 |
H82 |
109.5 |
109.5 |
C7 |
C8 |
H83 |
109.5 |
109.4 |
C8 |
C7 |
C6 |
112.1 |
109.5 |
C8 |
C7 |
H71 |
108.0 |
109.5 |
C8 |
C7 |
H72 |
108.6 |
109.4 |
H81 |
C8 |
H82 |
109.5 |
109.5 |
H81 |
C8 |
H83 |
109.5 |
109.5 |
H82 |
C8 |
H83 |
109.5 |
109.4 |
C6 |
C7 |
H71 |
108.0 |
109.5 |
C6 |
C7 |
H72 |
108.6 |
109.4 |
C7 |
C6 |
C5 |
116.3 |
109.5 |
C7 |
C6 |
H61 |
105.7 |
109.5 |
C7 |
C6 |
H62 |
107.3 |
109.5 |
H71 |
C7 |
H72 |
111.6 |
109.5 |
C2 |
OH |
HOH |
109.5 |
106.8 |
OH |
C2 |
C1 |
107.7 |
109.5 |
OH |
C2 |
C3 |
105.6 |
109.4 |
OH |
C2 |
H2 |
116.1 |
109.5 |
C2 |
C1 |
O1A |
113.8 |
119.9 |
C2 |
C1 |
O1B |
126.1 |
120.0 |
C1 |
C2 |
C3 |
117.2 |
109.5 |
C1 |
C2 |
H2 |
104.3 |
109.5 |
O1A |
C1 |
O1B |
120.1 |
120.1 |
C1 |
O1A |
H1A |
109.5 |
120.0 |
C3 |
C2 |
H2 |
106.4 |
109.5 |
C2 |
C3 |
C4 |
118.5 |
109.5 |
C2 |
C3 |
H31 |
104.5 |
109.4 |
C2 |
C3 |
H32 |
106.6 |
109.5 |
C4 |
C3 |
H31 |
104.5 |
109.5 |
C4 |
C3 |
H32 |
106.6 |
109.5 |
C3 |
C4 |
C5 |
115.2 |
109.5 |
C3 |
C4 |
H41 |
106.3 |
109.5 |
C3 |
C4 |
H42 |
107.6 |
109.4 |
H31 |
C3 |
H32 |
116.8 |
109.5 |
C5 |
C4 |
H41 |
106.3 |
109.5 |
C5 |
C4 |
H42 |
107.6 |
109.5 |
C4 |
C5 |
C6 |
115.6 |
109.5 |
C4 |
C5 |
H51 |
106.1 |
109.5 |
C4 |
C5 |
H52 |
107.5 |
109.4 |
H41 |
C4 |
H42 |
114.0 |
109.5 |
C6 |
C5 |
H51 |
106.0 |
109.4 |
C6 |
C5 |
H52 |
107.5 |
109.5 |
C5 |
C6 |
H61 |
105.7 |
109.5 |
C5 |
C6 |
H62 |
107.3 |
109.5 |
H51 |
C5 |
H52 |
114.4 |
109.5 |
H61 |
C6 |
H62 |
114.9 |
109.4 |
Torsion Angles for HOC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H81 |
C8 |
C7 |
H82 |
120.0 |
239.9 |
H81 |
C8 |
C7 |
H83 |
240.0 |
120.0 |
H82 |
C8 |
C7 |
H83 |
120.0 |
240.1 |
C6 |
C7 |
C8 |
H71 |
118.9 |
240.0 |
C6 |
C7 |
C8 |
H72 |
240.0 |
119.9 |
C8 |
C7 |
C6 |
C5 |
179.9 |
180.0 |
C8 |
C7 |
C6 |
H61 |
63.1 |
300.0 |
C8 |
C7 |
C6 |
H62 |
300.0 |
60.0 |
H71 |
C7 |
C8 |
H72 |
121.2 |
239.9 |
C7 |
C8 |
H81 |
H82 |
240.0 |
120.0 |
C7 |
C8 |
H81 |
H83 |
120.0 |
240.0 |
H81 |
C8 |
C7 |
C6 |
339.1 |
59.9 |
H81 |
C8 |
C7 |
H71 |
220.2 |
180.0 |
H81 |
C8 |
C7 |
H72 |
99.1 |
300.0 |
H82 |
C8 |
H81 |
H83 |
240.0 |
120.0 |
C7 |
C8 |
H82 |
H81 |
120.0 |
240.0 |
C7 |
C8 |
H82 |
H83 |
240.0 |
119.9 |
H82 |
C8 |
C7 |
C6 |
219.1 |
180.0 |
H82 |
C8 |
C7 |
H71 |
100.2 |
300.0 |
H82 |
C8 |
C7 |
H72 |
339.1 |
60.1 |
H81 |
C8 |
H82 |
H83 |
120.0 |
240.0 |
C7 |
C8 |
H83 |
H81 |
240.0 |
120.0 |
C7 |
C8 |
H83 |
H82 |
120.0 |
240.0 |
H83 |
C8 |
C7 |
C6 |
99.0 |
299.9 |
H83 |
C8 |
C7 |
H71 |
340.2 |
60.0 |
H83 |
C8 |
C7 |
H72 |
219.0 |
180.0 |
H81 |
C8 |
H83 |
H82 |
240.0 |
120.0 |
C6 |
C7 |
C8 |
H81 |
339.1 |
59.9 |
C6 |
C7 |
C8 |
H82 |
219.1 |
180.0 |
C6 |
C7 |
C8 |
H83 |
99.0 |
299.9 |
C8 |
C7 |
C6 |
H71 |
241.1 |
120.0 |
C8 |
C7 |
C6 |
H72 |
120.0 |
240.1 |
H71 |
C7 |
C6 |
H72 |
238.9 |
120.1 |
C4 |
C5 |
C6 |
C7 |
179.8 |
180.0 |
C7 |
C6 |
C5 |
H51 |
297.0 |
300.0 |
C7 |
C6 |
C5 |
H52 |
59.7 |
60.0 |
C5 |
C6 |
C7 |
H61 |
116.9 |
240.0 |
C5 |
C6 |
C7 |
H62 |
240.0 |
120.0 |
H61 |
C6 |
C7 |
H62 |
123.1 |
240.0 |
H71 |
C7 |
C8 |
H81 |
220.2 |
180.0 |
H71 |
C7 |
C8 |
H82 |
100.2 |
300.0 |
H71 |
C7 |
C8 |
H83 |
340.2 |
60.0 |
C8 |
C7 |
H71 |
C6 |
121.5 |
240.0 |
C8 |
C7 |
H71 |
H72 |
240.7 |
120.0 |
C6 |
C7 |
H71 |
H72 |
119.3 |
240.0 |
H71 |
C7 |
C6 |
C5 |
298.8 |
60.0 |
H71 |
C7 |
C6 |
H61 |
181.9 |
180.1 |
H71 |
C7 |
C6 |
H62 |
58.8 |
300.0 |
H72 |
C7 |
C8 |
H81 |
99.1 |
300.0 |
H72 |
C7 |
C8 |
H82 |
339.1 |
60.1 |
H72 |
C7 |
C8 |
H83 |
219.0 |
180.0 |
C8 |
C7 |
H72 |
C6 |
237.8 |
119.9 |
C8 |
C7 |
H72 |
H71 |
118.9 |
240.0 |
C6 |
C7 |
H72 |
H71 |
241.1 |
120.1 |
H72 |
C7 |
C6 |
C5 |
59.9 |
300.0 |
H72 |
C7 |
C6 |
H61 |
303.1 |
60.0 |
H72 |
C7 |
C6 |
H62 |
180.0 |
179.9 |
OH |
C2 |
C1 |
O1A |
343.3 |
175.0 |
OH |
C2 |
C1 |
O1B |
162.0 |
355.0 |
C1 |
C2 |
OH |
C3 |
126.0 |
120.0 |
C1 |
C2 |
OH |
H2 |
243.6 |
240.0 |
C3 |
C2 |
OH |
H2 |
117.6 |
120.0 |
OH |
C2 |
C3 |
C4 |
179.7 |
295.0 |
OH |
C2 |
C3 |
H31 |
64.0 |
175.0 |
OH |
C2 |
C3 |
H32 |
299.7 |
55.0 |
HOH |
OH |
C2 |
C1 |
332.6 |
60.0 |
HOH |
OH |
C2 |
C3 |
206.6 |
300.0 |
HOH |
OH |
C2 |
H2 |
89.0 |
180.0 |
C1 |
C2 |
OH |
HOH |
332.6 |
60.0 |
OH |
C2 |
C1 |
C3 |
241.2 |
240.1 |
OH |
C2 |
C1 |
H2 |
123.9 |
120.0 |
O1A |
C1 |
C2 |
O1B |
181.3 |
180.0 |
C2 |
C1 |
O1A |
H1A |
178.9 |
180.0 |
C3 |
C2 |
C1 |
H2 |
242.7 |
239.9 |
C1 |
C2 |
C3 |
C4 |
59.8 |
175.0 |
C1 |
C2 |
C3 |
H31 |
304.1 |
55.1 |
C1 |
C2 |
C3 |
H32 |
179.8 |
295.1 |
C2 |
C1 |
O1A |
O1B |
178.8 |
180.0 |
O1A |
C1 |
C2 |
C3 |
102.1 |
294.9 |
O1A |
C1 |
C2 |
H2 |
219.3 |
55.0 |
C2 |
C1 |
O1B |
O1A |
181.3 |
180.0 |
O1B |
C1 |
C2 |
C3 |
280.8 |
114.9 |
O1B |
C1 |
C2 |
H2 |
38.1 |
235.0 |
O1B |
C1 |
O1A |
H1A |
0.0 |
0.0 |
C3 |
C2 |
OH |
HOH |
206.6 |
300.0 |
OH |
C2 |
C3 |
C1 |
119.9 |
120.0 |
OH |
C2 |
C3 |
H2 |
236.0 |
240.0 |
C3 |
C2 |
C1 |
O1A |
102.1 |
294.9 |
C3 |
C2 |
C1 |
O1B |
280.8 |
114.9 |
C1 |
C2 |
C3 |
H2 |
116.1 |
120.1 |
C4 |
C3 |
C2 |
H31 |
115.7 |
120.0 |
C4 |
C3 |
C2 |
H32 |
240.0 |
240.0 |
C2 |
C3 |
C4 |
C5 |
244.5 |
180.1 |
C2 |
C3 |
C4 |
H41 |
127.0 |
60.0 |
C2 |
C3 |
C4 |
H42 |
4.5 |
300.0 |
H31 |
C3 |
C2 |
H32 |
124.3 |
120.0 |
H2 |
C2 |
OH |
HOH |
89.0 |
180.0 |
OH |
C2 |
H2 |
C1 |
241.7 |
240.0 |
OH |
C2 |
H2 |
C3 |
117.2 |
119.9 |
H2 |
C2 |
C1 |
O1A |
219.3 |
55.0 |
H2 |
C2 |
C1 |
O1B |
38.1 |
235.0 |
C1 |
C2 |
H2 |
C3 |
235.5 |
239.9 |
H2 |
C2 |
C3 |
C4 |
303.7 |
55.0 |
H2 |
C2 |
C3 |
H31 |
188.0 |
295.0 |
H2 |
C2 |
C3 |
H32 |
63.7 |
175.0 |
C4 |
C3 |
C2 |
H2 |
303.7 |
55.0 |
C2 |
C3 |
C4 |
H31 |
244.3 |
240.1 |
C2 |
C3 |
C4 |
H32 |
120.0 |
120.1 |
H31 |
C3 |
C4 |
H32 |
235.7 |
240.0 |
C5 |
C4 |
C3 |
H41 |
117.4 |
120.1 |
C5 |
C4 |
C3 |
H42 |
240.0 |
240.0 |
C3 |
C4 |
C5 |
C6 |
31.5 |
180.0 |
C3 |
C4 |
C5 |
H51 |
274.3 |
60.0 |
C3 |
C4 |
C5 |
H52 |
151.5 |
300.0 |
H41 |
C4 |
C3 |
H42 |
122.5 |
119.9 |
H31 |
C3 |
C2 |
H2 |
188.0 |
295.0 |
C2 |
C3 |
H31 |
C4 |
125.1 |
120.0 |
C2 |
C3 |
H31 |
H32 |
242.6 |
240.0 |
C4 |
C3 |
H31 |
H32 |
117.4 |
120.0 |
H31 |
C3 |
C4 |
C5 |
0.2 |
300.0 |
H31 |
C3 |
C4 |
H41 |
242.8 |
179.9 |
H31 |
C3 |
C4 |
H42 |
120.2 |
60.0 |
H32 |
C3 |
C2 |
H2 |
63.7 |
175.0 |
C2 |
C3 |
H32 |
C4 |
232.6 |
239.9 |
C2 |
C3 |
H32 |
H31 |
116.3 |
119.9 |
C4 |
C3 |
H32 |
H31 |
243.7 |
240.0 |
H32 |
C3 |
C4 |
C5 |
124.5 |
60.0 |
H32 |
C3 |
C4 |
H41 |
7.0 |
299.9 |
H32 |
C3 |
C4 |
H42 |
244.5 |
180.0 |
C7 |
C6 |
C5 |
C4 |
179.8 |
180.0 |
C5 |
C4 |
C3 |
H31 |
0.2 |
300.0 |
C5 |
C4 |
C3 |
H32 |
124.5 |
60.0 |
C3 |
C4 |
C5 |
H41 |
242.5 |
240.0 |
C3 |
C4 |
C5 |
H42 |
120.0 |
119.9 |
H41 |
C4 |
C5 |
H42 |
237.4 |
240.0 |
C6 |
C5 |
C4 |
H51 |
117.2 |
120.0 |
C6 |
C5 |
C4 |
H52 |
240.0 |
240.0 |
C4 |
C5 |
C6 |
H61 |
296.6 |
59.9 |
C4 |
C5 |
C6 |
H62 |
59.7 |
300.0 |
H51 |
C5 |
C4 |
H52 |
122.8 |
120.1 |
H41 |
C4 |
C3 |
H31 |
242.8 |
179.9 |
H41 |
C4 |
C3 |
H32 |
7.0 |
299.9 |
C3 |
C4 |
H41 |
C5 |
123.2 |
120.0 |
C3 |
C4 |
H41 |
H42 |
241.6 |
240.1 |
C5 |
C4 |
H41 |
H42 |
118.4 |
120.1 |
H41 |
C4 |
C5 |
C6 |
148.9 |
300.0 |
H41 |
C4 |
C5 |
H51 |
31.7 |
180.0 |
H41 |
C4 |
C5 |
H52 |
268.9 |
60.0 |
H42 |
C4 |
C3 |
H31 |
120.2 |
60.0 |
H42 |
C4 |
C3 |
H32 |
244.5 |
180.0 |
C3 |
C4 |
H42 |
C5 |
235.3 |
240.0 |
C3 |
C4 |
H42 |
H41 |
117.7 |
119.9 |
C5 |
C4 |
H42 |
H41 |
242.3 |
239.9 |
H42 |
C4 |
C5 |
C6 |
271.5 |
60.1 |
H42 |
C4 |
C5 |
H51 |
154.3 |
300.1 |
H42 |
C4 |
C5 |
H52 |
31.5 |
180.0 |
C5 |
C6 |
C7 |
H71 |
298.8 |
60.0 |
C5 |
C6 |
C7 |
H72 |
59.9 |
300.0 |
C7 |
C6 |
C5 |
H61 |
243.1 |
120.1 |
C7 |
C6 |
C5 |
H62 |
120.0 |
240.0 |
C6 |
C5 |
C4 |
H41 |
148.9 |
300.0 |
C6 |
C5 |
C4 |
H42 |
271.5 |
60.1 |
C4 |
C5 |
C6 |
H51 |
242.8 |
240.0 |
C4 |
C5 |
C6 |
H52 |
120.0 |
120.0 |
H51 |
C5 |
C6 |
H52 |
237.2 |
240.0 |
H61 |
C6 |
C5 |
H62 |
236.9 |
119.9 |
H51 |
C5 |
C4 |
H41 |
31.7 |
180.0 |
H51 |
C5 |
C4 |
H42 |
154.3 |
300.1 |
C4 |
C5 |
H51 |
C6 |
123.4 |
120.0 |
C4 |
C5 |
H51 |
H52 |
241.7 |
240.0 |
C6 |
C5 |
H51 |
H52 |
118.3 |
120.0 |
H51 |
C5 |
C6 |
H61 |
53.8 |
180.0 |
H51 |
C5 |
C6 |
H62 |
176.9 |
60.0 |
H52 |
C5 |
C4 |
H41 |
268.9 |
60.0 |
H52 |
C5 |
C4 |
H42 |
31.5 |
180.0 |
C4 |
C5 |
H52 |
C6 |
234.9 |
240.0 |
C4 |
C5 |
H52 |
H51 |
117.5 |
120.1 |
C6 |
C5 |
H52 |
H51 |
242.5 |
240.0 |
H52 |
C5 |
C6 |
H61 |
176.6 |
300.0 |
H52 |
C5 |
C6 |
H62 |
299.7 |
180.1 |
H61 |
C6 |
C7 |
H71 |
181.9 |
180.1 |
H61 |
C6 |
C7 |
H72 |
303.1 |
60.0 |
C7 |
C6 |
H61 |
C5 |
123.9 |
240.0 |
C7 |
C6 |
H61 |
H62 |
241.9 |
120.0 |
H61 |
C6 |
C5 |
H51 |
53.8 |
180.0 |
H61 |
C6 |
C5 |
H52 |
176.6 |
300.0 |
C5 |
C6 |
H61 |
H62 |
118.1 |
240.0 |
H62 |
C6 |
C7 |
H71 |
58.8 |
300.0 |
H62 |
C6 |
C7 |
H72 |
180.0 |
179.9 |
C7 |
C6 |
H62 |
C5 |
234.4 |
120.0 |
C7 |
C6 |
H62 |
H61 |
117.2 |
240.0 |
H62 |
C6 |
C5 |
H51 |
176.9 |
60.0 |
H62 |
C6 |
C5 |
H52 |
299.7 |
180.1 |
C5 |
C6 |
H62 |
H61 |
242.8 |
119.9 |
H1A |
O1A |
C1 |
O1B |
0.0 |
0.0 |