PDB Chemical Component GCO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for GCO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.345 |
1.507 |
C1 |
O1A |
1.373 |
1.207 |
C1 |
O1B |
1.291 |
1.342 |
C2 |
C3 |
1.426 |
1.529 |
C2 |
O2 |
1.370 |
1.429 |
C2 |
H2 |
1.114 |
1.090 |
C3 |
C4 |
1.505 |
1.529 |
C3 |
O3 |
1.402 |
1.429 |
C3 |
H3 |
1.116 |
1.090 |
C4 |
C5 |
1.490 |
1.530 |
C4 |
O4 |
1.417 |
1.428 |
C4 |
H4 |
1.115 |
1.090 |
C5 |
C6 |
1.489 |
1.529 |
C5 |
O5 |
1.461 |
1.429 |
C5 |
H5 |
1.116 |
1.090 |
C6 |
O6 |
1.411 |
1.429 |
C6 |
H61 |
1.115 |
1.090 |
C6 |
H62 |
1.115 |
1.090 |
O1B |
HO1B |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.966 |
O3 |
HO3 |
0.950 |
0.966 |
O4 |
HO4 |
0.949 |
0.967 |
O5 |
HO5 |
0.950 |
0.967 |
O6 |
HO6 |
0.949 |
0.966 |
Bond Angles for GCO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1A |
103.1 |
120.1 |
C2 |
C1 |
O1B |
102.5 |
120.0 |
C1 |
C2 |
C3 |
123.9 |
109.6 |
C1 |
C2 |
O2 |
94.1 |
109.4 |
C1 |
C2 |
H2 |
110.8 |
109.5 |
O1A |
C1 |
O1B |
97.1 |
120.0 |
C1 |
O1B |
HO1B |
102.5 |
120.1 |
C3 |
C2 |
O2 |
109.0 |
109.5 |
C3 |
C2 |
H2 |
96.4 |
109.5 |
C2 |
C3 |
C4 |
110.4 |
109.5 |
C2 |
C3 |
O3 |
102.1 |
109.5 |
C2 |
C3 |
H3 |
115.7 |
109.5 |
O2 |
C2 |
H2 |
125.2 |
109.4 |
C2 |
O2 |
HO2 |
94.2 |
106.8 |
C4 |
C3 |
O3 |
115.0 |
109.4 |
C4 |
C3 |
H3 |
103.0 |
109.4 |
C3 |
C4 |
C5 |
107.9 |
109.5 |
C3 |
C4 |
O4 |
111.5 |
109.5 |
C3 |
C4 |
H4 |
108.3 |
109.4 |
O3 |
C3 |
H3 |
111.1 |
109.4 |
C3 |
O3 |
HO3 |
102.1 |
106.8 |
C5 |
C4 |
O4 |
106.8 |
109.5 |
C5 |
C4 |
H4 |
112.9 |
109.4 |
C4 |
C5 |
C6 |
116.1 |
109.5 |
C4 |
C5 |
O5 |
104.2 |
109.5 |
C4 |
C5 |
H5 |
107.4 |
109.4 |
O4 |
C4 |
H4 |
109.4 |
109.5 |
C4 |
O4 |
HO4 |
111.5 |
106.8 |
C6 |
C5 |
O5 |
105.0 |
109.5 |
C6 |
C5 |
H5 |
106.6 |
109.5 |
C5 |
C6 |
O6 |
113.3 |
109.5 |
C5 |
C6 |
H61 |
110.8 |
109.5 |
C5 |
C6 |
H62 |
110.8 |
109.5 |
O5 |
C5 |
H5 |
118.0 |
109.4 |
C5 |
O5 |
HO5 |
104.2 |
106.7 |
O6 |
C6 |
H61 |
110.8 |
109.4 |
O6 |
C6 |
H62 |
110.8 |
109.4 |
C6 |
O6 |
HO6 |
113.2 |
106.9 |
H61 |
C6 |
H62 |
99.5 |
109.5 |
Torsion Angles for GCO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1A |
C1 |
C2 |
O1B |
100.5 |
180.0 |
C2 |
C1 |
O1B |
HO1B |
180.0 |
180.1 |
C3 |
C2 |
C1 |
O2 |
243.8 |
240.0 |
C3 |
C2 |
C1 |
H2 |
113.5 |
120.0 |
C1 |
C2 |
C3 |
C4 |
291.2 |
180.0 |
C1 |
C2 |
C3 |
O3 |
168.5 |
60.0 |
C1 |
C2 |
C3 |
H3 |
47.6 |
300.0 |
O2 |
C2 |
C1 |
H2 |
229.7 |
240.1 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
300.0 |
C2 |
C1 |
O1A |
O1B |
255.3 |
180.0 |
O1A |
C1 |
C2 |
C3 |
178.2 |
240.0 |
O1A |
C1 |
C2 |
O2 |
294.4 |
0.0 |
O1A |
C1 |
C2 |
H2 |
64.7 |
120.0 |
O1A |
C1 |
O1B |
HO1B |
74.8 |
0.0 |
C2 |
C1 |
O1B |
O1A |
105.2 |
180.0 |
O1B |
C1 |
C2 |
C3 |
77.7 |
60.0 |
O1B |
C1 |
C2 |
O2 |
193.9 |
180.0 |
O1B |
C1 |
C2 |
H2 |
324.2 |
299.9 |
C3 |
C2 |
C1 |
O1A |
178.2 |
240.0 |
C3 |
C2 |
C1 |
O1B |
77.7 |
60.0 |
C1 |
C2 |
C3 |
O2 |
108.8 |
120.0 |
C1 |
C2 |
C3 |
H2 |
239.6 |
240.0 |
O2 |
C2 |
C3 |
H2 |
130.8 |
119.9 |
C3 |
C2 |
O2 |
HO2 |
308.1 |
60.1 |
C4 |
C3 |
C2 |
O3 |
122.7 |
120.0 |
C4 |
C3 |
C2 |
H3 |
243.6 |
240.0 |
C2 |
C3 |
C4 |
C5 |
120.9 |
180.0 |
C2 |
C3 |
C4 |
O4 |
237.9 |
300.0 |
C2 |
C3 |
C4 |
H4 |
358.4 |
60.0 |
O3 |
C3 |
C2 |
H3 |
120.8 |
120.0 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
60.0 |
O2 |
C2 |
C1 |
O1A |
294.4 |
0.0 |
O2 |
C2 |
C1 |
O1B |
193.9 |
180.0 |
C1 |
C2 |
O2 |
C3 |
231.9 |
239.9 |
C1 |
C2 |
O2 |
H2 |
119.1 |
120.0 |
C3 |
C2 |
O2 |
H2 |
247.2 |
240.0 |
O2 |
C2 |
C3 |
C4 |
182.4 |
60.0 |
O2 |
C2 |
C3 |
O3 |
59.6 |
300.0 |
O2 |
C2 |
C3 |
H3 |
298.8 |
180.0 |
H2 |
C2 |
C1 |
O1A |
64.7 |
120.0 |
H2 |
C2 |
C1 |
O1B |
324.2 |
299.9 |
C1 |
C2 |
H2 |
C3 |
130.0 |
120.1 |
C1 |
C2 |
H2 |
O2 |
248.8 |
240.1 |
C3 |
C2 |
H2 |
O2 |
118.7 |
119.9 |
H2 |
C2 |
C3 |
C4 |
51.6 |
300.0 |
H2 |
C2 |
C3 |
O3 |
288.9 |
180.0 |
H2 |
C2 |
C3 |
H3 |
168.0 |
60.0 |
H2 |
C2 |
O2 |
HO2 |
60.9 |
180.0 |
C4 |
C3 |
C2 |
O2 |
182.4 |
60.0 |
C4 |
C3 |
C2 |
H2 |
51.6 |
300.0 |
C2 |
C3 |
C4 |
O3 |
245.1 |
240.0 |
C2 |
C3 |
C4 |
H3 |
124.1 |
120.0 |
O3 |
C3 |
C4 |
H3 |
238.9 |
240.1 |
C4 |
C3 |
O3 |
HO3 |
60.5 |
300.0 |
C5 |
C4 |
C3 |
O4 |
243.0 |
240.0 |
C5 |
C4 |
C3 |
H4 |
122.6 |
119.9 |
C3 |
C4 |
C5 |
C6 |
159.1 |
180.0 |
C3 |
C4 |
C5 |
O5 |
274.0 |
300.1 |
C3 |
C4 |
C5 |
H5 |
39.9 |
60.0 |
O4 |
C4 |
C3 |
H4 |
239.6 |
240.0 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
300.0 |
O3 |
C3 |
C2 |
O2 |
59.6 |
300.0 |
O3 |
C3 |
C2 |
H2 |
288.9 |
180.0 |
C2 |
C3 |
O3 |
C4 |
119.5 |
120.1 |
C2 |
C3 |
O3 |
H3 |
236.1 |
240.0 |
C4 |
C3 |
O3 |
H3 |
116.5 |
119.9 |
O3 |
C3 |
C4 |
C5 |
235.8 |
300.0 |
O3 |
C3 |
C4 |
O4 |
352.8 |
60.0 |
O3 |
C3 |
C4 |
H4 |
113.2 |
180.1 |
H3 |
C3 |
C2 |
O2 |
298.8 |
180.0 |
H3 |
C3 |
C2 |
H2 |
168.0 |
60.0 |
C2 |
C3 |
H3 |
C4 |
239.5 |
239.9 |
C2 |
C3 |
H3 |
O3 |
115.8 |
120.0 |
C4 |
C3 |
H3 |
O3 |
236.3 |
240.1 |
H3 |
C3 |
C4 |
C5 |
356.9 |
59.9 |
H3 |
C3 |
C4 |
O4 |
113.9 |
180.0 |
H3 |
C3 |
C4 |
H4 |
234.3 |
300.0 |
H3 |
C3 |
O3 |
HO3 |
304.0 |
180.0 |
C5 |
C4 |
C3 |
O3 |
235.8 |
300.0 |
C5 |
C4 |
C3 |
H3 |
356.9 |
59.9 |
C3 |
C4 |
C5 |
O4 |
120.0 |
120.0 |
C3 |
C4 |
C5 |
H4 |
240.3 |
240.0 |
O4 |
C4 |
C5 |
H4 |
120.3 |
120.0 |
C5 |
C4 |
O4 |
HO4 |
297.7 |
60.1 |
C6 |
C5 |
C4 |
O5 |
245.1 |
239.9 |
C6 |
C5 |
C4 |
H5 |
119.2 |
120.0 |
C4 |
C5 |
C6 |
O6 |
31.8 |
180.0 |
C4 |
C5 |
C6 |
H61 |
157.1 |
60.0 |
C4 |
C5 |
C6 |
H62 |
266.5 |
300.0 |
O5 |
C5 |
C4 |
H5 |
234.1 |
240.1 |
C4 |
C5 |
O5 |
HO5 |
180.0 |
300.0 |
O4 |
C4 |
C3 |
O3 |
352.8 |
60.0 |
O4 |
C4 |
C3 |
H3 |
113.9 |
180.0 |
C3 |
C4 |
O4 |
C5 |
242.4 |
239.9 |
C3 |
C4 |
O4 |
H4 |
119.8 |
120.0 |
C5 |
C4 |
O4 |
H4 |
237.4 |
240.1 |
O4 |
C4 |
C5 |
C6 |
39.1 |
60.0 |
O4 |
C4 |
C5 |
O5 |
154.0 |
180.0 |
O4 |
C4 |
C5 |
H5 |
279.9 |
300.0 |
H4 |
C4 |
C3 |
O3 |
113.2 |
180.1 |
H4 |
C4 |
C3 |
H3 |
234.3 |
300.0 |
C3 |
C4 |
H4 |
C5 |
119.4 |
120.0 |
C3 |
C4 |
H4 |
O4 |
238.3 |
240.0 |
C5 |
C4 |
H4 |
O4 |
118.8 |
120.0 |
H4 |
C4 |
C5 |
C6 |
278.8 |
300.0 |
H4 |
C4 |
C5 |
O5 |
33.7 |
60.0 |
H4 |
C4 |
C5 |
H5 |
159.6 |
180.0 |
H4 |
C4 |
O4 |
HO4 |
60.2 |
180.0 |
C6 |
C5 |
C4 |
O4 |
39.1 |
60.0 |
C6 |
C5 |
C4 |
H4 |
278.8 |
300.0 |
C4 |
C5 |
C6 |
O5 |
114.4 |
120.1 |
C4 |
C5 |
C6 |
H5 |
240.4 |
240.0 |
O5 |
C5 |
C6 |
H5 |
126.0 |
119.9 |
C6 |
C5 |
O5 |
HO5 |
302.4 |
60.1 |
O6 |
C6 |
C5 |
H61 |
234.7 |
120.0 |
O6 |
C6 |
C5 |
H62 |
125.3 |
240.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
250.6 |
120.0 |
O5 |
C5 |
C4 |
O4 |
154.0 |
180.0 |
O5 |
C5 |
C4 |
H4 |
33.7 |
60.0 |
C4 |
C5 |
O5 |
C6 |
237.5 |
239.9 |
C4 |
C5 |
O5 |
H5 |
119.0 |
119.9 |
C6 |
C5 |
O5 |
H5 |
241.5 |
240.0 |
O5 |
C5 |
C6 |
O6 |
277.3 |
59.9 |
O5 |
C5 |
C6 |
H61 |
42.6 |
299.9 |
O5 |
C5 |
C6 |
H62 |
152.1 |
179.9 |
H5 |
C5 |
C4 |
O4 |
279.9 |
300.0 |
H5 |
C5 |
C4 |
H4 |
159.6 |
180.0 |
C4 |
C5 |
H5 |
C6 |
125.1 |
120.0 |
C4 |
C5 |
H5 |
O5 |
242.7 |
240.0 |
C6 |
C5 |
H5 |
O5 |
117.7 |
120.0 |
H5 |
C5 |
C6 |
O6 |
151.4 |
300.0 |
H5 |
C5 |
C6 |
H61 |
276.7 |
180.0 |
H5 |
C5 |
C6 |
H62 |
26.1 |
60.0 |
H5 |
C5 |
O5 |
HO5 |
61.0 |
180.0 |
O6 |
C6 |
C5 |
O5 |
277.3 |
59.9 |
O6 |
C6 |
C5 |
H5 |
151.4 |
300.0 |
C5 |
C6 |
O6 |
H61 |
125.3 |
240.0 |
C5 |
C6 |
O6 |
H62 |
234.7 |
120.0 |
H61 |
C6 |
O6 |
H62 |
109.5 |
240.0 |
H61 |
C6 |
C5 |
O5 |
42.6 |
299.9 |
H61 |
C6 |
C5 |
H5 |
276.7 |
180.0 |
C5 |
C6 |
H61 |
O6 |
233.3 |
120.1 |
C5 |
C6 |
H61 |
H62 |
116.6 |
240.0 |
O6 |
C6 |
H61 |
H62 |
243.3 |
119.9 |
H61 |
C6 |
O6 |
HO6 |
54.8 |
300.0 |
H62 |
C6 |
C5 |
O5 |
152.1 |
179.9 |
H62 |
C6 |
C5 |
H5 |
26.1 |
60.0 |
C5 |
C6 |
H62 |
O6 |
126.7 |
240.0 |
C5 |
C6 |
H62 |
H61 |
243.4 |
120.0 |
O6 |
C6 |
H62 |
H61 |
116.7 |
240.1 |
H62 |
C6 |
O6 |
HO6 |
305.3 |
60.0 |
HO2 |
O2 |
C2 |
H2 |
60.9 |
180.0 |
HO3 |
O3 |
C3 |
H3 |
304.0 |
180.0 |
HO4 |
O4 |
C4 |
H4 |
60.2 |
180.0 |
HO5 |
O5 |
C5 |
H5 |
61.0 |
180.0 |
HO6 |
O6 |
C6 |
H61 |
54.8 |
300.0 |
HO6 |
O6 |
C6 |
H62 |
305.3 |
60.0 |