PDB Chemical Component G6P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for G6P
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.550 |
1.530 |
C1 |
O1 |
1.439 |
1.429 |
C1 |
O5 |
1.466 |
1.427 |
C1 |
H1 |
1.100 |
1.089 |
C2 |
C3 |
1.540 |
1.532 |
C2 |
O2 |
1.468 |
1.429 |
C2 |
H2 |
1.100 |
1.090 |
C3 |
C4 |
1.537 |
1.534 |
C3 |
O3 |
1.433 |
1.429 |
C3 |
H3 |
1.100 |
1.090 |
C4 |
C5 |
1.554 |
1.530 |
C4 |
O4 |
1.444 |
1.429 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
C6 |
1.539 |
1.530 |
C5 |
O5 |
1.461 |
1.426 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
O6 |
1.433 |
1.429 |
C6 |
H61 |
1.100 |
1.089 |
C6 |
H62 |
1.100 |
1.090 |
O1 |
HO1 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.968 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
HO4 |
0.950 |
0.967 |
O6 |
P |
1.624 |
1.610 |
P |
O1P |
1.484 |
1.609 |
P |
O2P |
1.609 |
1.610 |
P |
O3P |
1.610 |
1.481 |
O1P |
HO1P |
0.950 |
0.967 |
O2P |
HO2P |
0.950 |
0.967 |
Bond Angles for G6P
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
110.8 |
109.4 |
C2 |
C1 |
O5 |
109.7 |
109.7 |
C2 |
C1 |
H1 |
108.7 |
109.4 |
C1 |
C2 |
C3 |
108.5 |
109.1 |
C1 |
C2 |
O2 |
109.9 |
109.5 |
C1 |
C2 |
H2 |
109.8 |
109.5 |
O1 |
C1 |
O5 |
110.3 |
109.4 |
O1 |
C1 |
H1 |
108.1 |
109.5 |
C1 |
O1 |
HO1 |
109.5 |
106.8 |
O5 |
C1 |
H1 |
109.3 |
109.4 |
C1 |
O5 |
C5 |
111.7 |
107.6 |
C3 |
C2 |
O2 |
109.5 |
109.5 |
C3 |
C2 |
H2 |
110.2 |
109.6 |
C2 |
C3 |
C4 |
108.2 |
108.6 |
C2 |
C3 |
O3 |
109.8 |
109.7 |
C2 |
C3 |
H3 |
110.2 |
109.7 |
O2 |
C2 |
H2 |
108.8 |
109.6 |
C2 |
O2 |
HO2 |
109.5 |
106.8 |
C4 |
C3 |
O3 |
109.7 |
109.6 |
C4 |
C3 |
H3 |
110.2 |
109.6 |
C3 |
C4 |
C5 |
108.5 |
109.0 |
C3 |
C4 |
O4 |
109.3 |
109.6 |
C3 |
C4 |
H4 |
110.4 |
109.5 |
O3 |
C3 |
H3 |
108.7 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
106.7 |
C5 |
C4 |
O4 |
109.9 |
109.5 |
C5 |
C4 |
H4 |
109.8 |
109.6 |
C4 |
C5 |
C6 |
108.8 |
109.4 |
C4 |
C5 |
O5 |
110.0 |
109.8 |
C4 |
C5 |
H5 |
109.4 |
109.4 |
O4 |
C4 |
H4 |
108.9 |
109.6 |
C4 |
O4 |
HO4 |
109.5 |
106.8 |
C6 |
C5 |
O5 |
108.7 |
109.4 |
C6 |
C5 |
H5 |
110.6 |
109.5 |
C5 |
C6 |
O6 |
110.6 |
109.4 |
C5 |
C6 |
H61 |
109.1 |
109.4 |
C5 |
C6 |
H62 |
108.9 |
109.5 |
O5 |
C5 |
H5 |
109.4 |
109.4 |
O6 |
C6 |
H61 |
109.1 |
109.5 |
O6 |
C6 |
H62 |
108.8 |
109.5 |
C6 |
O6 |
P |
108.5 |
106.8 |
H61 |
C6 |
H62 |
110.4 |
109.5 |
O6 |
P |
O1P |
110.1 |
109.5 |
O6 |
P |
O2P |
109.1 |
109.5 |
O6 |
P |
O3P |
110.2 |
109.4 |
O1P |
P |
O2P |
109.3 |
109.5 |
O1P |
P |
O3P |
108.8 |
109.5 |
P |
O1P |
HO1P |
109.5 |
106.8 |
O2P |
P |
O3P |
109.3 |
109.5 |
P |
O2P |
HO2P |
109.5 |
106.8 |
Torsion Angles for G6P
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
238.0 |
239.9 |
O1 |
C1 |
C2 |
H1 |
118.6 |
119.9 |
C2 |
C1 |
O1 |
HO1 |
65.2 |
180.1 |
O5 |
C1 |
C2 |
H1 |
240.6 |
240.0 |
C2 |
C1 |
O5 |
C5 |
299.1 |
292.4 |
C3 |
C2 |
C1 |
O2 |
240.3 |
240.2 |
C3 |
C2 |
C1 |
H2 |
120.5 |
120.0 |
C1 |
C2 |
C3 |
C4 |
300.0 |
306.2 |
C1 |
C2 |
C3 |
O3 |
180.3 |
186.4 |
C1 |
C2 |
C3 |
H3 |
60.6 |
65.9 |
O2 |
C2 |
C1 |
H2 |
240.3 |
239.8 |
C1 |
C2 |
O2 |
HO2 |
56.9 |
60.4 |
C2 |
C1 |
O1 |
O5 |
121.7 |
120.2 |
C2 |
C1 |
O1 |
H1 |
241.0 |
240.1 |
O1 |
C1 |
C2 |
C3 |
298.0 |
301.3 |
O1 |
C1 |
C2 |
O2 |
57.7 |
61.1 |
O1 |
C1 |
C2 |
H2 |
177.4 |
181.3 |
O5 |
C1 |
O1 |
H1 |
119.4 |
119.8 |
O1 |
C1 |
O5 |
C5 |
61.4 |
52.5 |
C2 |
C1 |
O5 |
O1 |
237.7 |
239.9 |
C2 |
C1 |
O5 |
H1 |
119.0 |
120.1 |
O5 |
C1 |
C2 |
C3 |
60.0 |
61.3 |
O5 |
C1 |
C2 |
O2 |
179.7 |
181.2 |
O5 |
C1 |
C2 |
H2 |
299.4 |
301.4 |
O1 |
C1 |
O5 |
H1 |
241.4 |
240.1 |
O5 |
C1 |
O1 |
HO1 |
303.5 |
59.9 |
C4 |
C5 |
O5 |
C1 |
60.7 |
67.6 |
C6 |
C5 |
O5 |
C1 |
179.7 |
187.6 |
C1 |
O5 |
C5 |
H5 |
300.6 |
307.5 |
C2 |
C1 |
H1 |
O1 |
120.3 |
119.9 |
C2 |
C1 |
H1 |
O5 |
240.3 |
239.8 |
H1 |
C1 |
C2 |
C3 |
179.3 |
181.4 |
H1 |
C1 |
C2 |
O2 |
299.1 |
301.2 |
H1 |
C1 |
C2 |
H2 |
58.8 |
61.4 |
O1 |
C1 |
H1 |
O5 |
120.0 |
119.9 |
H1 |
C1 |
O1 |
HO1 |
184.2 |
300.0 |
H1 |
C1 |
O5 |
C5 |
180.1 |
172.4 |
C3 |
C2 |
C1 |
O1 |
298.0 |
301.3 |
C3 |
C2 |
C1 |
O5 |
60.0 |
61.3 |
C3 |
C2 |
C1 |
H1 |
179.3 |
181.4 |
C1 |
C2 |
C3 |
O2 |
120.0 |
119.8 |
C1 |
C2 |
C3 |
H2 |
239.7 |
240.1 |
O2 |
C2 |
C3 |
H2 |
119.7 |
120.2 |
C3 |
C2 |
O2 |
HO2 |
176.0 |
180.0 |
C4 |
C3 |
C2 |
O3 |
119.7 |
119.7 |
C4 |
C3 |
C2 |
H3 |
239.4 |
240.2 |
C2 |
C3 |
C4 |
C5 |
59.6 |
53.8 |
C2 |
C3 |
C4 |
O4 |
179.5 |
173.6 |
C2 |
C3 |
C4 |
H4 |
299.3 |
293.9 |
O3 |
C3 |
C2 |
H3 |
119.7 |
120.5 |
C2 |
C3 |
O3 |
HO3 |
355.2 |
299.2 |
O2 |
C2 |
C1 |
O1 |
57.7 |
61.1 |
O2 |
C2 |
C1 |
O5 |
179.7 |
181.2 |
O2 |
C2 |
C1 |
H1 |
299.1 |
301.2 |
C1 |
C2 |
O2 |
C3 |
240.9 |
240.4 |
C1 |
C2 |
O2 |
H2 |
120.3 |
120.2 |
C3 |
C2 |
O2 |
H2 |
239.4 |
239.7 |
O2 |
C2 |
C3 |
C4 |
180.0 |
186.3 |
O2 |
C2 |
C3 |
O3 |
60.3 |
66.6 |
O2 |
C2 |
C3 |
H3 |
300.6 |
306.1 |
H2 |
C2 |
C1 |
O1 |
177.4 |
181.3 |
H2 |
C2 |
C1 |
O5 |
299.4 |
301.4 |
H2 |
C2 |
C1 |
H1 |
58.8 |
61.4 |
C1 |
C2 |
H2 |
C3 |
119.5 |
119.7 |
C1 |
C2 |
H2 |
O2 |
239.6 |
239.8 |
C3 |
C2 |
H2 |
O2 |
120.1 |
120.2 |
H2 |
C2 |
C3 |
C4 |
60.3 |
66.1 |
H2 |
C2 |
C3 |
O3 |
300.6 |
306.4 |
H2 |
C2 |
C3 |
H3 |
180.9 |
185.9 |
H2 |
C2 |
O2 |
HO2 |
296.6 |
300.2 |
C4 |
C3 |
C2 |
O2 |
180.0 |
186.3 |
C4 |
C3 |
C2 |
H2 |
60.3 |
66.1 |
C2 |
C3 |
C4 |
O3 |
240.2 |
240.2 |
C2 |
C3 |
C4 |
H3 |
120.5 |
119.8 |
O3 |
C3 |
C4 |
H3 |
240.3 |
239.6 |
C4 |
C3 |
O3 |
HO3 |
236.4 |
180.0 |
C5 |
C4 |
C3 |
O4 |
240.1 |
240.1 |
C5 |
C4 |
C3 |
H4 |
120.3 |
119.9 |
C3 |
C4 |
C5 |
C6 |
181.3 |
178.7 |
C3 |
C4 |
C5 |
O5 |
300.3 |
298.7 |
C3 |
C4 |
C5 |
H5 |
60.5 |
58.8 |
O4 |
C4 |
C3 |
H4 |
240.2 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
119.0 |
60.5 |
O3 |
C3 |
C2 |
O2 |
60.3 |
66.6 |
O3 |
C3 |
C2 |
H2 |
300.6 |
306.4 |
C2 |
C3 |
O3 |
C4 |
118.8 |
119.1 |
C2 |
C3 |
O3 |
H3 |
239.4 |
239.5 |
C4 |
C3 |
O3 |
H3 |
120.6 |
120.4 |
O3 |
C3 |
C4 |
C5 |
179.4 |
173.6 |
O3 |
C3 |
C4 |
O4 |
299.3 |
293.5 |
O3 |
C3 |
C4 |
H4 |
59.1 |
53.7 |
H3 |
C3 |
C2 |
O2 |
300.6 |
306.1 |
H3 |
C3 |
C2 |
H2 |
180.9 |
185.9 |
C2 |
C3 |
H3 |
C4 |
240.6 |
240.9 |
C2 |
C3 |
H3 |
O3 |
120.3 |
120.6 |
C4 |
C3 |
H3 |
O3 |
239.7 |
239.7 |
H3 |
C3 |
C4 |
C5 |
299.1 |
294.0 |
H3 |
C3 |
C4 |
O4 |
59.0 |
53.9 |
H3 |
C3 |
C4 |
H4 |
178.8 |
174.1 |
H3 |
C3 |
O3 |
HO3 |
115.8 |
59.7 |
C1 |
O5 |
C5 |
C4 |
60.7 |
67.6 |
C5 |
C4 |
C3 |
O3 |
179.4 |
173.6 |
C5 |
C4 |
C3 |
H3 |
299.1 |
294.0 |
C3 |
C4 |
C5 |
O4 |
119.5 |
119.9 |
C3 |
C4 |
C5 |
H4 |
239.3 |
240.1 |
O4 |
C4 |
C5 |
H4 |
119.8 |
120.3 |
C5 |
C4 |
O4 |
HO4 |
237.9 |
180.1 |
C6 |
C5 |
C4 |
O5 |
241.0 |
239.9 |
C6 |
C5 |
C4 |
H5 |
120.9 |
119.9 |
C4 |
C5 |
C6 |
O6 |
179.7 |
185.3 |
C4 |
C5 |
C6 |
H61 |
59.7 |
305.3 |
C4 |
C5 |
C6 |
H62 |
299.2 |
65.3 |
O5 |
C5 |
C4 |
H5 |
239.9 |
239.9 |
O4 |
C4 |
C3 |
O3 |
299.3 |
293.5 |
O4 |
C4 |
C3 |
H3 |
59.0 |
53.9 |
C3 |
C4 |
O4 |
C5 |
241.0 |
240.4 |
C3 |
C4 |
O4 |
H4 |
120.7 |
120.2 |
C5 |
C4 |
O4 |
H4 |
239.7 |
239.7 |
O4 |
C4 |
C5 |
C6 |
61.8 |
58.8 |
O4 |
C4 |
C5 |
O5 |
180.8 |
178.8 |
O4 |
C4 |
C5 |
H5 |
301.0 |
298.9 |
H4 |
C4 |
C3 |
O3 |
59.1 |
53.7 |
H4 |
C4 |
C3 |
H3 |
178.8 |
174.1 |
C3 |
C4 |
H4 |
C5 |
119.5 |
119.6 |
C3 |
C4 |
H4 |
O4 |
240.0 |
239.8 |
C5 |
C4 |
H4 |
O4 |
120.4 |
120.2 |
H4 |
C4 |
C5 |
C6 |
302.0 |
298.5 |
H4 |
C4 |
C5 |
O5 |
61.0 |
58.6 |
H4 |
C4 |
C5 |
H5 |
181.1 |
178.6 |
H4 |
C4 |
O4 |
HO4 |
358.3 |
300.3 |
C1 |
O5 |
C5 |
C6 |
179.7 |
187.6 |
C6 |
C5 |
C4 |
O4 |
61.8 |
58.8 |
C6 |
C5 |
C4 |
H4 |
302.0 |
298.5 |
C4 |
C5 |
C6 |
O5 |
119.8 |
120.3 |
C4 |
C5 |
C6 |
H5 |
239.9 |
240.1 |
O5 |
C5 |
C6 |
H5 |
120.1 |
119.8 |
O6 |
C6 |
C5 |
H61 |
120.0 |
240.0 |
O6 |
C6 |
C5 |
H62 |
240.5 |
120.0 |
C5 |
C6 |
O6 |
P |
181.3 |
180.0 |
H61 |
C6 |
C5 |
H62 |
120.5 |
239.9 |
C5 |
O5 |
C1 |
H1 |
180.1 |
172.4 |
O5 |
C5 |
C4 |
O4 |
180.8 |
178.8 |
O5 |
C5 |
C4 |
H4 |
61.0 |
58.6 |
C4 |
C5 |
O5 |
C6 |
241.0 |
240.0 |
C4 |
C5 |
O5 |
H5 |
120.1 |
120.1 |
C6 |
C5 |
O5 |
H5 |
239.2 |
240.1 |
O5 |
C5 |
C6 |
O6 |
60.0 |
65.0 |
O5 |
C5 |
C6 |
H61 |
300.0 |
185.0 |
O5 |
C5 |
C6 |
H62 |
179.5 |
305.0 |
H5 |
C5 |
C4 |
O4 |
301.0 |
298.9 |
H5 |
C5 |
C4 |
H4 |
181.1 |
178.6 |
C4 |
C5 |
H5 |
C6 |
119.8 |
119.8 |
C4 |
C5 |
H5 |
O5 |
239.5 |
239.7 |
C6 |
C5 |
H5 |
O5 |
119.7 |
119.9 |
H5 |
C5 |
C6 |
O6 |
299.9 |
305.2 |
H5 |
C5 |
C6 |
H61 |
179.9 |
65.1 |
H5 |
C5 |
C6 |
H62 |
59.4 |
185.2 |
O6 |
C6 |
C5 |
O5 |
60.0 |
65.0 |
O6 |
C6 |
C5 |
H5 |
299.9 |
305.2 |
C5 |
C6 |
O6 |
H61 |
240.0 |
119.9 |
C5 |
C6 |
O6 |
H62 |
119.5 |
240.0 |
H61 |
C6 |
O6 |
H62 |
239.5 |
120.1 |
C6 |
O6 |
P |
O1P |
60.7 |
175.0 |
C6 |
O6 |
P |
O2P |
180.6 |
295.0 |
C6 |
O6 |
P |
O3P |
300.6 |
55.0 |
H61 |
C6 |
C5 |
O5 |
300.0 |
185.0 |
H61 |
C6 |
C5 |
H5 |
179.9 |
65.1 |
C5 |
C6 |
H61 |
O6 |
120.9 |
240.1 |
C5 |
C6 |
H61 |
H62 |
240.5 |
120.0 |
O6 |
C6 |
H61 |
H62 |
119.5 |
240.0 |
H61 |
C6 |
O6 |
P |
301.2 |
60.0 |
H62 |
C6 |
C5 |
O5 |
179.5 |
305.0 |
H62 |
C6 |
C5 |
H5 |
59.4 |
185.2 |
C5 |
C6 |
H62 |
O6 |
239.4 |
120.0 |
C5 |
C6 |
H62 |
H61 |
119.7 |
240.0 |
O6 |
C6 |
H62 |
H61 |
240.3 |
120.1 |
H62 |
C6 |
O6 |
P |
61.7 |
299.9 |
HO1 |
O1 |
C1 |
O5 |
303.5 |
59.9 |
HO1 |
O1 |
C1 |
H1 |
184.2 |
300.0 |
HO2 |
O2 |
C2 |
H2 |
296.6 |
300.2 |
HO3 |
O3 |
C3 |
H3 |
115.8 |
59.7 |
HO4 |
O4 |
C4 |
H4 |
358.3 |
300.3 |
P |
O6 |
C6 |
H61 |
301.2 |
60.0 |
P |
O6 |
C6 |
H62 |
61.7 |
299.9 |
O1P |
P |
O6 |
O2P |
240.1 |
240.0 |
O1P |
P |
O6 |
O3P |
120.0 |
120.0 |
O6 |
P |
O1P |
HO1P |
56.9 |
180.0 |
O2P |
P |
O6 |
O3P |
240.0 |
240.0 |
O6 |
P |
O2P |
HO2P |
120.8 |
300.0 |
O6 |
P |
O1P |
O2P |
119.8 |
120.0 |
O6 |
P |
O1P |
O3P |
239.1 |
240.1 |
O2P |
P |
O1P |
O3P |
119.3 |
120.0 |
O1P |
P |
O2P |
HO2P |
241.2 |
60.0 |
O6 |
P |
O2P |
O1P |
239.6 |
240.0 |
O6 |
P |
O2P |
O3P |
120.6 |
119.9 |
O1P |
P |
O2P |
O3P |
241.0 |
240.0 |
O2P |
P |
O1P |
HO1P |
297.1 |
60.0 |
O6 |
P |
O3P |
O1P |
120.8 |
120.0 |
O6 |
P |
O3P |
O2P |
240.1 |
240.0 |
O1P |
P |
O3P |
O2P |
119.3 |
120.0 |
O3P |
P |
O1P |
HO1P |
177.7 |
300.0 |
O3P |
P |
O2P |
HO2P |
0.2 |
180.0 |
HO1P |
O1P |
P |
O2P |
297.1 |
60.0 |
HO1P |
O1P |
P |
O3P |
177.7 |
300.0 |
HO2P |
O2P |
P |
O3P |
0.2 |
180.0 |