PDB Chemical Component G6P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for G6P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.550 1.530
C1 O1 1.439 1.429
C1 O5 1.466 1.427
C1 H1 1.100 1.089
C2 C3 1.540 1.532
C2 O2 1.468 1.429
C2 H2 1.100 1.090
C3 C4 1.537 1.534
C3 O3 1.433 1.429
C3 H3 1.100 1.090
C4 C5 1.554 1.530
C4 O4 1.444 1.429
C4 H4 1.100 1.090
C5 C6 1.539 1.530
C5 O5 1.461 1.426
C5 H5 1.100 1.090
C6 O6 1.433 1.429
C6 H61 1.100 1.089
C6 H62 1.100 1.090
O1 HO1 0.950 0.967
O2 HO2 0.950 0.968
O3 HO3 0.950 0.967
O4 HO4 0.950 0.967
O6 P 1.624 1.610
P O1P 1.484 1.609
P O2P 1.609 1.610
P O3P 1.610 1.481
O1P HO1P 0.950 0.967
O2P HO2P 0.950 0.967

Bond Angles for G6P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 110.8 109.4
C2 C1 O5 109.7 109.7
C2 C1 H1 108.7 109.4
C1 C2 C3 108.5 109.1
C1 C2 O2 109.9 109.5
C1 C2 H2 109.8 109.5
O1 C1 O5 110.3 109.4
O1 C1 H1 108.1 109.5
C1 O1 HO1 109.5 106.8
O5 C1 H1 109.3 109.4
C1 O5 C5 111.7 107.6
C3 C2 O2 109.5 109.5
C3 C2 H2 110.2 109.6
C2 C3 C4 108.2 108.6
C2 C3 O3 109.8 109.7
C2 C3 H3 110.2 109.7
O2 C2 H2 108.8 109.6
C2 O2 HO2 109.5 106.8
C4 C3 O3 109.7 109.6
C4 C3 H3 110.2 109.6
C3 C4 C5 108.5 109.0
C3 C4 O4 109.3 109.6
C3 C4 H4 110.4 109.5
O3 C3 H3 108.7 109.6
C3 O3 HO3 109.5 106.7
C5 C4 O4 109.9 109.5
C5 C4 H4 109.8 109.6
C4 C5 C6 108.8 109.4
C4 C5 O5 110.0 109.8
C4 C5 H5 109.4 109.4
O4 C4 H4 108.9 109.6
C4 O4 HO4 109.5 106.8
C6 C5 O5 108.7 109.4
C6 C5 H5 110.6 109.5
C5 C6 O6 110.6 109.4
C5 C6 H61 109.1 109.4
C5 C6 H62 108.9 109.5
O5 C5 H5 109.4 109.4
O6 C6 H61 109.1 109.5
O6 C6 H62 108.8 109.5
C6 O6 P 108.5 106.8
H61 C6 H62 110.4 109.5
O6 P O1P 110.1 109.5
O6 P O2P 109.1 109.5
O6 P O3P 110.2 109.4
O1P P O2P 109.3 109.5
O1P P O3P 108.8 109.5
P O1P HO1P 109.5 106.8
O2P P O3P 109.3 109.5
P O2P HO2P 109.5 106.8

Torsion Angles for G6P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 238.0 239.9
O1 C1 C2 H1 118.6 119.9
C2 C1 O1 HO1 65.2 180.1
O5 C1 C2 H1 240.6 240.0
C2 C1 O5 C5 299.1 292.4
C3 C2 C1 O2 240.3 240.2
C3 C2 C1 H2 120.5 120.0
C1 C2 C3 C4 300.0 306.2
C1 C2 C3 O3 180.3 186.4
C1 C2 C3 H3 60.6 65.9
O2 C2 C1 H2 240.3 239.8
C1 C2 O2 HO2 56.9 60.4
C2 C1 O1 O5 121.7 120.2
C2 C1 O1 H1 241.0 240.1
O1 C1 C2 C3 298.0 301.3
O1 C1 C2 O2 57.7 61.1
O1 C1 C2 H2 177.4 181.3
O5 C1 O1 H1 119.4 119.8
O1 C1 O5 C5 61.4 52.5
C2 C1 O5 O1 237.7 239.9
C2 C1 O5 H1 119.0 120.1
O5 C1 C2 C3 60.0 61.3
O5 C1 C2 O2 179.7 181.2
O5 C1 C2 H2 299.4 301.4
O1 C1 O5 H1 241.4 240.1
O5 C1 O1 HO1 303.5 59.9
C4 C5 O5 C1 60.7 67.6
C6 C5 O5 C1 179.7 187.6
C1 O5 C5 H5 300.6 307.5
C2 C1 H1 O1 120.3 119.9
C2 C1 H1 O5 240.3 239.8
H1 C1 C2 C3 179.3 181.4
H1 C1 C2 O2 299.1 301.2
H1 C1 C2 H2 58.8 61.4
O1 C1 H1 O5 120.0 119.9
H1 C1 O1 HO1 184.2 300.0
H1 C1 O5 C5 180.1 172.4
C3 C2 C1 O1 298.0 301.3
C3 C2 C1 O5 60.0 61.3
C3 C2 C1 H1 179.3 181.4
C1 C2 C3 O2 120.0 119.8
C1 C2 C3 H2 239.7 240.1
O2 C2 C3 H2 119.7 120.2
C3 C2 O2 HO2 176.0 180.0
C4 C3 C2 O3 119.7 119.7
C4 C3 C2 H3 239.4 240.2
C2 C3 C4 C5 59.6 53.8
C2 C3 C4 O4 179.5 173.6
C2 C3 C4 H4 299.3 293.9
O3 C3 C2 H3 119.7 120.5
C2 C3 O3 HO3 355.2 299.2
O2 C2 C1 O1 57.7 61.1
O2 C2 C1 O5 179.7 181.2
O2 C2 C1 H1 299.1 301.2
C1 C2 O2 C3 240.9 240.4
C1 C2 O2 H2 120.3 120.2
C3 C2 O2 H2 239.4 239.7
O2 C2 C3 C4 180.0 186.3
O2 C2 C3 O3 60.3 66.6
O2 C2 C3 H3 300.6 306.1
H2 C2 C1 O1 177.4 181.3
H2 C2 C1 O5 299.4 301.4
H2 C2 C1 H1 58.8 61.4
C1 C2 H2 C3 119.5 119.7
C1 C2 H2 O2 239.6 239.8
C3 C2 H2 O2 120.1 120.2
H2 C2 C3 C4 60.3 66.1
H2 C2 C3 O3 300.6 306.4
H2 C2 C3 H3 180.9 185.9
H2 C2 O2 HO2 296.6 300.2
C4 C3 C2 O2 180.0 186.3
C4 C3 C2 H2 60.3 66.1
C2 C3 C4 O3 240.2 240.2
C2 C3 C4 H3 120.5 119.8
O3 C3 C4 H3 240.3 239.6
C4 C3 O3 HO3 236.4 180.0
C5 C4 C3 O4 240.1 240.1
C5 C4 C3 H4 120.3 119.9
C3 C4 C5 C6 181.3 178.7
C3 C4 C5 O5 300.3 298.7
C3 C4 C5 H5 60.5 58.8
O4 C4 C3 H4 240.2 239.8
C3 C4 O4 HO4 119.0 60.5
O3 C3 C2 O2 60.3 66.6
O3 C3 C2 H2 300.6 306.4
C2 C3 O3 C4 118.8 119.1
C2 C3 O3 H3 239.4 239.5
C4 C3 O3 H3 120.6 120.4
O3 C3 C4 C5 179.4 173.6
O3 C3 C4 O4 299.3 293.5
O3 C3 C4 H4 59.1 53.7
H3 C3 C2 O2 300.6 306.1
H3 C3 C2 H2 180.9 185.9
C2 C3 H3 C4 240.6 240.9
C2 C3 H3 O3 120.3 120.6
C4 C3 H3 O3 239.7 239.7
H3 C3 C4 C5 299.1 294.0
H3 C3 C4 O4 59.0 53.9
H3 C3 C4 H4 178.8 174.1
H3 C3 O3 HO3 115.8 59.7
C1 O5 C5 C4 60.7 67.6
C5 C4 C3 O3 179.4 173.6
C5 C4 C3 H3 299.1 294.0
C3 C4 C5 O4 119.5 119.9
C3 C4 C5 H4 239.3 240.1
O4 C4 C5 H4 119.8 120.3
C5 C4 O4 HO4 237.9 180.1
C6 C5 C4 O5 241.0 239.9
C6 C5 C4 H5 120.9 119.9
C4 C5 C6 O6 179.7 185.3
C4 C5 C6 H61 59.7 305.3
C4 C5 C6 H62 299.2 65.3
O5 C5 C4 H5 239.9 239.9
O4 C4 C3 O3 299.3 293.5
O4 C4 C3 H3 59.0 53.9
C3 C4 O4 C5 241.0 240.4
C3 C4 O4 H4 120.7 120.2
C5 C4 O4 H4 239.7 239.7
O4 C4 C5 C6 61.8 58.8
O4 C4 C5 O5 180.8 178.8
O4 C4 C5 H5 301.0 298.9
H4 C4 C3 O3 59.1 53.7
H4 C4 C3 H3 178.8 174.1
C3 C4 H4 C5 119.5 119.6
C3 C4 H4 O4 240.0 239.8
C5 C4 H4 O4 120.4 120.2
H4 C4 C5 C6 302.0 298.5
H4 C4 C5 O5 61.0 58.6
H4 C4 C5 H5 181.1 178.6
H4 C4 O4 HO4 358.3 300.3
C1 O5 C5 C6 179.7 187.6
C6 C5 C4 O4 61.8 58.8
C6 C5 C4 H4 302.0 298.5
C4 C5 C6 O5 119.8 120.3
C4 C5 C6 H5 239.9 240.1
O5 C5 C6 H5 120.1 119.8
O6 C6 C5 H61 120.0 240.0
O6 C6 C5 H62 240.5 120.0
C5 C6 O6 P 181.3 180.0
H61 C6 C5 H62 120.5 239.9
C5 O5 C1 H1 180.1 172.4
O5 C5 C4 O4 180.8 178.8
O5 C5 C4 H4 61.0 58.6
C4 C5 O5 C6 241.0 240.0
C4 C5 O5 H5 120.1 120.1
C6 C5 O5 H5 239.2 240.1
O5 C5 C6 O6 60.0 65.0
O5 C5 C6 H61 300.0 185.0
O5 C5 C6 H62 179.5 305.0
H5 C5 C4 O4 301.0 298.9
H5 C5 C4 H4 181.1 178.6
C4 C5 H5 C6 119.8 119.8
C4 C5 H5 O5 239.5 239.7
C6 C5 H5 O5 119.7 119.9
H5 C5 C6 O6 299.9 305.2
H5 C5 C6 H61 179.9 65.1
H5 C5 C6 H62 59.4 185.2
O6 C6 C5 O5 60.0 65.0
O6 C6 C5 H5 299.9 305.2
C5 C6 O6 H61 240.0 119.9
C5 C6 O6 H62 119.5 240.0
H61 C6 O6 H62 239.5 120.1
C6 O6 P O1P 60.7 175.0
C6 O6 P O2P 180.6 295.0
C6 O6 P O3P 300.6 55.0
H61 C6 C5 O5 300.0 185.0
H61 C6 C5 H5 179.9 65.1
C5 C6 H61 O6 120.9 240.1
C5 C6 H61 H62 240.5 120.0
O6 C6 H61 H62 119.5 240.0
H61 C6 O6 P 301.2 60.0
H62 C6 C5 O5 179.5 305.0
H62 C6 C5 H5 59.4 185.2
C5 C6 H62 O6 239.4 120.0
C5 C6 H62 H61 119.7 240.0
O6 C6 H62 H61 240.3 120.1
H62 C6 O6 P 61.7 299.9
HO1 O1 C1 O5 303.5 59.9
HO1 O1 C1 H1 184.2 300.0
HO2 O2 C2 H2 296.6 300.2
HO3 O3 C3 H3 115.8 59.7
HO4 O4 C4 H4 358.3 300.3
P O6 C6 H61 301.2 60.0
P O6 C6 H62 61.7 299.9
O1P P O6 O2P 240.1 240.0
O1P P O6 O3P 120.0 120.0
O6 P O1P HO1P 56.9 180.0
O2P P O6 O3P 240.0 240.0
O6 P O2P HO2P 120.8 300.0
O6 P O1P O2P 119.8 120.0
O6 P O1P O3P 239.1 240.1
O2P P O1P O3P 119.3 120.0
O1P P O2P HO2P 241.2 60.0
O6 P O2P O1P 239.6 240.0
O6 P O2P O3P 120.6 119.9
O1P P O2P O3P 241.0 240.0
O2P P O1P HO1P 297.1 60.0
O6 P O3P O1P 120.8 120.0
O6 P O3P O2P 240.1 240.0
O1P P O3P O2P 119.3 120.0
O3P P O1P HO1P 177.7 300.0
O3P P O2P HO2P 0.2 180.0
HO1P O1P P O2P 297.1 60.0
HO1P O1P P O3P 177.7 300.0
HO2P O2P P O3P 0.2 180.0