PDB Chemical Component G16

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for G16

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.543	1.531
C1	O1	1.409	1.428
C1	O5	1.453	1.426
C1	H1	1.114	1.090
C2	C3	1.537	1.532
C2	O2	1.455	1.428
C2	H2	1.115	1.090
C3	C4	1.545	1.533
C3	O3	1.441	1.429
C3	H3	1.115	1.090
C4	C5	1.572	1.530
C4	O4	1.337	1.429
C4	H4	1.115	1.091
C5	C6	1.569	1.529
C5	O5	1.468	1.427
C5	H5	1.115	1.090
C6	O6	1.330	1.429
C6	H61	1.116	1.090
C6	H62	1.116	1.090
O1	P'	1.486	1.610
O2	HO2	0.949	0.967
O3	HO3	0.950	0.967
O4	HO4	0.950	0.967
O6	P	1.550	1.610
P	O1P	1.536	1.480
P	O2P	1.538	1.611
P	O3P	1.523	1.610
O2P	HOP2	0.950	0.967
O3P	HOP3	0.950	0.967
P'	O1X	1.516	1.611
P'	O2X	1.507	1.545
P'	O3X	1.522	1.545
O1X	HO1'	0.950	0.967

Bond Angles for G16

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	103.1	109.2
C2	C1	O5	110.5	109.9
C2	C1	H1	114.3	109.4
C1	C2	C3	109.8	109.0
C1	C2	O2	111.3	109.5
C1	C2	H2	107.3	109.5
O1	C1	O5	113.0	109.4
O1	C1	H1	111.8	109.4
C1	O1	P'	121.5	106.8
O5	C1	H1	104.5	109.4
C1	O5	C5	118.9	107.6
C3	C2	O2	107.4	109.8
C3	C2	H2	111.3	109.4
C2	C3	C4	113.6	108.8
C2	C3	O3	103.1	109.6
C2	C3	H3	110.3	109.6
O2	C2	H2	109.8	109.6
C2	O2	HO2	111.2	106.8
C4	C3	O3	107.0	109.6
C4	C3	H3	106.5	109.6
C3	C4	C5	113.5	109.0
C3	C4	O4	110.4	109.6
C3	C4	H4	107.5	109.5
O3	C3	H3	116.6	109.6
C3	O3	HO3	103.0	106.8
C5	C4	O4	113.2	109.6
C5	C4	H4	104.2	109.5
C4	C5	C6	108.8	109.5
C4	C5	O5	106.2	109.8
C4	C5	H5	113.5	109.4
O4	C4	H4	107.7	109.5
C4	O4	HO4	110.4	106.8
C6	C5	O5	113.5	109.4
C6	C5	H5	106.1	109.5
C5	C6	O6	109.7	109.5
C5	C6	H61	112.2	109.5
C5	C6	H62	112.2	109.5
O5	C5	H5	108.8	109.4
O6	C6	H61	112.1	109.5
O6	C6	H62	112.1	109.5
C6	O6	P	120.9	106.8
H61	C6	H62	98.2	109.5
O1	P'	O1X	111.0	109.5
O1	P'	O2X	110.3	109.5
O1	P'	O3X	109.3	109.5
O6	P	O1P	109.4	109.5
O6	P	O2P	109.2	109.4
O6	P	O3P	109.9	109.5
O1P	P	O2P	109.1	109.5
O1P	P	O3P	110.3	109.5
O2P	P	O3P	109.0	109.5
P	O2P	HOP2	109.1	106.8
P	O3P	HOP3	109.9	106.8
O1X	P'	O2X	110.3	109.4
O1X	P'	O3X	107.8	109.5
P'	O1X	HO1'	111.0	106.8
O2X	P'	O3X	108.0	109.5

Torsion Angles for G16

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O5	239.0	239.9
O1	C1	C2	H1	121.5	119.7
C2	C1	O1	P'	217.2	210.4
O5	C1	C2	H1	242.5	239.9
C2	C1	O5	C5	299.5	292.5
C3	C2	C1	O2	241.2	239.8
C3	C2	C1	H2	121.1	119.6
C1	C2	C3	C4	310.6	306.5
C1	C2	C3	O3	195.2	186.7
C1	C2	C3	H3	70.1	66.4
O2	C2	C1	H2	239.8	239.8
C1	C2	O2	HO2	180.0	60.0
C2	C1	O1	O5	119.3	120.4
C2	C1	O1	H1	236.8	240.3
O1	C1	C2	C3	290.8	300.9
O1	C1	C2	O2	49.5	61.1
O1	C1	C2	H2	169.7	181.3
O5	C1	O1	H1	117.6	119.9
O1	C1	O5	C5	54.4	52.4
C1	O1	P'	O1X	22.4	175.0
C1	O1	P'	O2X	145.0	295.0
C1	O1	P'	O3X	263.6	55.1
C2	C1	O5	O1	245.1	240.0
C2	C1	O5	H1	123.4	120.1
O5	C1	C2	C3	51.8	61.0
O5	C1	C2	O2	170.6	181.2
O5	C1	C2	H2	290.7	301.4
O1	C1	O5	H1	238.3	240.1
O5	C1	O1	P'	97.9	90.0
C4	C5	O5	C1	57.0	67.6
C6	C5	O5	C1	176.6	187.7
C1	O5	C5	H5	294.5	307.5
C2	C1	H1	O1	116.6	119.6
C2	C1	H1	O5	239.1	239.5
H1	C1	C2	C3	169.3	181.2
H1	C1	C2	O2	288.1	301.4
H1	C1	C2	H2	48.2	61.6
O1	C1	H1	O5	122.6	119.9
H1	C1	O1	P'	340.4	330.1
H1	C1	O5	C5	176.1	172.4
C3	C2	C1	O1	290.8	300.9
C3	C2	C1	O5	51.8	61.0
C3	C2	C1	H1	169.3	181.2
C1	C2	C3	O2	121.1	120.0
C1	C2	C3	H2	241.3	240.3
O2	C2	C3	H2	120.2	120.3
C3	C2	O2	HO2	300.2	179.7
C4	C3	C2	O3	115.5	119.8
C4	C3	C2	H3	240.5	240.2
C2	C3	C4	C5	49.9	53.6
C2	C3	C4	O4	178.1	173.6
C2	C3	C4	H4	295.3	293.8
O3	C3	C2	H3	125.1	120.4
C2	C3	O3	HO3	180.0	299.6
O2	C2	C1	O1	49.5	61.1
O2	C2	C1	O5	170.6	181.2
O2	C2	C1	H1	288.1	301.4
C1	C2	O2	C3	239.8	240.3
C1	C2	O2	H2	118.7	120.2
C3	C2	O2	H2	238.9	239.8
O2	C2	C3	C4	189.5	186.5
O2	C2	C3	O3	74.0	66.7
O2	C2	C3	H3	308.9	306.3
H2	C2	C1	O1	169.7	181.3
H2	C2	C1	O5	290.7	301.4
H2	C2	C1	H1	48.2	61.6
C1	C2	H2	C3	120.1	119.4
C1	C2	H2	O2	238.9	239.8
C3	C2	H2	O2	118.8	120.4
H2	C2	C3	C4	69.3	66.3
H2	C2	C3	O3	313.8	306.4
H2	C2	C3	H3	188.7	186.1
H2	C2	O2	HO2	61.3	299.9
C4	C3	C2	O2	189.5	186.5
C4	C3	C2	H2	69.3	66.3
C2	C3	C4	O3	246.9	240.2
C2	C3	C4	H3	121.6	119.8
O3	C3	C4	H3	234.7	239.6
C4	C3	O3	HO3	59.9	180.3
C5	C4	C3	O4	231.8	240.0
C5	C4	C3	H4	114.6	119.9
C3	C4	C5	C6	188.3	178.7
C3	C4	C5	O5	310.9	298.8
C3	C4	C5	H5	70.4	58.8
O4	C4	C3	H4	242.8	239.9
C3	C4	O4	HO4	180.0	60.0
O3	C3	C2	O2	74.0	66.7
O3	C3	C2	H2	313.8	306.4
C2	C3	O3	C4	120.1	119.3
C2	C3	O3	H3	239.1	239.7
C4	C3	O3	H3	119.0	120.3
O3	C3	C4	C5	163.0	173.5
O3	C3	C4	O4	291.2	293.4
O3	C3	C4	H4	48.4	53.6
H3	C3	C2	O2	308.9	306.3
H3	C3	C2	H2	188.7	186.1
C2	C3	H3	C4	236.3	240.7
C2	C3	H3	O3	117.0	120.3
C4	C3	H3	O3	240.7	239.7
H3	C3	C4	C5	288.3	293.8
H3	C3	C4	O4	56.6	53.8
H3	C3	C4	H4	173.7	173.9
H3	C3	O3	HO3	300.9	59.9
C1	O5	C5	C4	57.0	67.6
C5	C4	C3	O3	163.0	173.5
C5	C4	C3	H3	288.3	293.8
C3	C4	C5	O4	126.8	120.0
C3	C4	C5	H4	243.5	240.1
O4	C4	C5	H4	116.7	120.2
C5	C4	O4	HO4	308.4	179.6
C6	C5	C4	O5	237.5	240.0
C6	C5	C4	H5	118.0	119.9
C4	C5	C6	O6	38.5	185.0
C4	C5	C6	H61	163.8	305.0
C4	C5	C6	H62	273.2	65.0
O5	C5	C4	H5	240.5	240.0
O4	C4	C3	O3	291.2	293.4
O4	C4	C3	H3	56.6	53.8
C3	C4	O4	C5	231.6	240.4
C3	C4	O4	H4	117.0	120.2
C5	C4	O4	H4	245.4	239.8
O4	C4	C5	C6	61.6	58.8
O4	C4	C5	O5	184.1	178.8
O4	C4	C5	H5	303.6	298.8
H4	C4	C3	O3	48.4	53.6
H4	C4	C3	H3	173.7	173.9
C3	C4	H4	C5	120.7	119.6
C3	C4	H4	O4	241.1	239.8
C5	C4	H4	O4	120.5	120.2
H4	C4	C5	C6	304.9	298.6
H4	C4	C5	O5	67.4	58.7
H4	C4	C5	H5	186.9	178.7
H4	C4	O4	HO4	63.0	299.8
C1	O5	C5	C6	176.6	187.7
C6	C5	C4	O4	61.6	58.8
C6	C5	C4	H4	304.9	298.6
C4	C5	C6	O5	118.0	120.3
C4	C5	C6	H5	237.5	240.1
O5	C5	C6	H5	119.5	119.8
O6	C6	C5	H61	234.7	240.0
O6	C6	C5	H62	125.3	120.0
C5	C6	O6	P	211.1	180.0
H61	C6	C5	H62	250.6	240.0
C5	O5	C1	H1	176.1	172.4
O5	C5	C4	O4	184.1	178.8
O5	C5	C4	H4	67.4	58.7
C4	C5	O5	C6	240.5	239.9
C4	C5	O5	H5	122.5	120.1
C6	C5	O5	H5	242.1	240.2
O5	C5	C6	O6	280.5	64.7
O5	C5	C6	H61	45.8	184.7
O5	C5	C6	H62	155.2	304.7
H5	C5	C4	O4	303.6	298.8
H5	C5	C4	H4	186.9	178.7
C4	C5	H5	C6	119.5	119.9
C4	C5	H5	O5	242.0	239.7
C6	C5	H5	O5	122.5	119.8
H5	C5	C6	O6	161.0	304.9
H5	C5	C6	H61	286.3	64.9
H5	C5	C6	H62	35.7	184.9
O6	C6	C5	O5	280.5	64.7
O6	C6	C5	H5	161.0	304.9
C5	C6	O6	H61	125.3	120.0
C5	C6	O6	H62	234.7	240.0
H61	C6	O6	H62	109.4	120.0
C6	O6	P	O1P	315.5	55.0
C6	O6	P	O2P	196.2	175.0
C6	O6	P	O3P	76.7	295.0
H61	C6	C5	O5	45.8	184.7
H61	C6	C5	H5	286.3	64.9
C5	C6	H61	O6	236.1	240.0
C5	C6	H61	H62	118.1	120.0
O6	C6	H61	H62	242.0	240.0
H61	C6	O6	P	85.8	60.0
H62	C6	C5	O5	155.2	304.7
H62	C6	C5	H5	35.7	184.9
C5	C6	H62	O6	124.0	120.0
C5	C6	H62	H61	241.9	240.0
O6	C6	H62	H61	118.0	120.0
H62	C6	O6	P	336.5	300.0
P'	O1	C1	O5	97.9	90.0
P'	O1	C1	H1	340.4	330.1
O1X	P'	O1	O2X	237.4	240.1
O1X	P'	O1	O3X	118.8	120.0
O1	P'	O1X	HO1'	180.1	180.0
O2X	P'	O1	O3X	241.4	239.9
HO2	O2	C2	H2	61.3	299.9
HO3	O3	C3	H3	300.9	59.9
HO4	O4	C4	H4	63.0	299.8
P	O6	C6	H61	85.8	60.0
P	O6	C6	H62	336.5	300.0
O1P	P	O6	O2P	119.3	240.0
O1P	P	O6	O3P	238.8	120.0
O2P	P	O6	O3P	119.5	240.0
O6	P	O2P	HOP2	180.0	180.0
O6	P	O3P	HOP3	180.0	300.0
O6	P	O1P	O2P	240.7	120.0
O6	P	O1P	O3P	121.0	240.0
O2P	P	O1P	O3P	240.3	120.0
O1P	P	O2P	HOP2	60.5	300.0
O1P	P	O3P	HOP3	300.7	180.0
O6	P	O2P	O1P	119.4	240.0
O6	P	O2P	O3P	240.0	120.0
O1P	P	O2P	O3P	120.5	240.0
O2P	P	O3P	HOP3	60.4	60.0
O6	P	O3P	O1P	239.4	120.0
O6	P	O3P	O2P	119.6	240.0
O1P	P	O3P	O2P	240.2	120.0
O3P	P	O2P	HOP2	300.0	60.0
HOP2	O2P	P	O3P	300.0	60.0
O1	P'	O1X	O2X	122.6	120.0
O1	P'	O1X	O3X	240.3	240.0
O2X	P'	O1X	O3X	117.7	120.0
O1	P'	O2X	O1X	237.0	240.0
O1	P'	O2X	O3X	119.4	120.1
O1X	P'	O2X	O3X	242.4	240.0
O2X	P'	O1X	HO1'	57.4	60.0
O1	P'	O3X	O1X	120.8	120.0
O1	P'	O3X	O2X	240.0	239.9
O1X	P'	O3X	O2X	119.2	119.9
O3X	P'	O1X	HO1'	299.7	300.0
HO1'	O1X	P'	O2X	57.4	60.0
HO1'	O1X	P'	O3X	299.7	300.0