PDB Chemical Component DKA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DKA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 O1 1.253 1.208
C1 C2 1.529 1.506
C1 O2 1.255 1.343
C2 C3 1.531 1.531
C2 H21 1.100 1.090
C2 H22 1.100 1.090
C3 C4 1.520 1.530
C3 H31 1.100 1.089
C3 H32 1.100 1.091
C4 C5 1.522 1.530
C4 H41 1.100 1.090
C4 H42 1.100 1.091
C5 C6 1.523 1.530
C5 H51 1.100 1.090
C5 H52 1.100 1.090
C6 C7 1.528 1.530
C6 H61 1.100 1.090
C6 H62 1.100 1.089
C7 C8 1.525 1.530
C7 H71 1.099 1.089
C7 H72 1.100 1.090
C8 C9 1.520 1.531
C8 H81 1.101 1.090
C8 H82 1.100 1.091
C9 C10 1.513 1.530
C9 H91 1.100 1.089
C9 H92 1.100 1.090
C10 H101 1.100 1.089
C10 H102 1.100 1.091
C10 H103 1.100 1.090
O2 HO2 0.950 0.967

Bond Angles for DKA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 118.5 120.0
O1 C1 O2 123.1 120.0
C2 C1 O2 118.4 120.0
C1 C2 C3 110.4 109.5
C1 C2 H21 109.1 109.5
C1 C2 H22 109.1 109.5
C1 O2 HO2 109.5 117.0
C3 C2 H21 109.1 109.4
C3 C2 H22 109.2 109.5
C2 C3 C4 104.6 109.5
C2 C3 H31 111.1 109.4
C2 C3 H32 111.1 109.5
H21 C2 H22 109.8 109.5
C4 C3 H31 111.1 109.5
C4 C3 H32 111.1 109.5
C3 C4 C5 111.7 109.5
C3 C4 H41 108.7 109.5
C3 C4 H42 108.7 109.5
H31 C3 H32 107.8 109.5
C5 C4 H41 108.8 109.5
C5 C4 H42 108.7 109.5
C4 C5 C6 111.0 109.4
C4 C5 H51 109.0 109.4
C4 C5 H52 109.0 109.5
H41 C4 H42 110.2 109.4
C6 C5 H51 109.0 109.5
C6 C5 H52 108.9 109.5
C5 C6 C7 112.7 109.4
C5 C6 H61 108.4 109.5
C5 C6 H62 108.4 109.5
H51 C5 H52 110.0 109.5
C7 C6 H61 108.4 109.5
C7 C6 H62 108.4 109.5
C6 C7 C8 111.6 109.4
C6 C7 H71 108.8 109.5
C6 C7 H72 108.8 109.5
H61 C6 H62 110.5 109.5
C8 C7 H71 108.8 109.5
C8 C7 H72 108.8 109.5
C7 C8 C9 111.7 109.5
C7 C8 H81 108.7 109.5
C7 C8 H82 108.8 109.5
H71 C7 H72 110.2 109.5
C9 C8 H81 108.7 109.4
C9 C8 H82 108.7 109.5
C8 C9 C10 110.7 109.5
C8 C9 H91 109.1 109.4
C8 C9 H92 109.1 109.5
H81 C8 H82 110.2 109.5
C10 C9 H91 109.1 109.5
C10 C9 H92 109.0 109.5
C9 C10 H101 109.5 109.5
C9 C10 H102 109.5 109.5
C9 C10 H103 109.5 109.5
H91 C9 H92 109.9 109.4
H101 C10 H102 109.4 109.5
H101 C10 H103 109.5 109.5
H102 C10 H103 109.5 109.4

Torsion Angles for DKA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 O2 180.2 180.2
O1 C1 C2 C3 289.1 0.1
O1 C1 C2 H21 49.1 120.0
O1 C1 C2 H22 169.1 240.0
O1 C1 O2 HO2 360.0 359.9
O1 C1 C2 O2 179.8 179.8
C2 C1 O2 HO2 179.8 179.7
C3 C2 C1 H21 240.0 240.1
C3 C2 C1 H22 120.0 120.0
C1 C2 C3 C4 190.4 180.0
C1 C2 C3 H31 310.4 300.0
C1 C2 C3 H32 70.4 60.0
H21 C2 C1 H22 240.0 240.0
O1 C1 O2 C2 180.2 180.2
O2 C1 C2 C3 109.2 180.2
O2 C1 C2 H21 229.2 300.2
O2 C1 C2 H22 349.2 60.2
C3 C2 C1 O2 109.2 180.2
C1 C2 C3 H21 120.0 120.0
C1 C2 C3 H22 240.0 239.9
H21 C2 C3 H22 120.0 120.0
C4 C3 C2 H31 240.0 240.0
C4 C3 C2 H32 120.0 120.0
C2 C3 C4 C5 139.0 180.0
C2 C3 C4 H41 259.0 300.1
C2 C3 C4 H42 19.0 60.0
H31 C3 C2 H32 240.0 240.0
H21 C2 C1 O2 229.2 300.2
C1 C2 H21 C3 239.2 240.0
C1 C2 H21 H22 119.6 120.1
C3 C2 H21 H22 240.4 240.0
H21 C2 C3 C4 70.5 60.0
H21 C2 C3 H31 190.4 180.0
H21 C2 C3 H32 310.5 300.0
H22 C2 C1 O2 349.2 60.2
C1 C2 H22 C3 120.8 120.0
C1 C2 H22 H21 240.4 240.0
C3 C2 H22 H21 119.6 119.9
H22 C2 C3 C4 310.4 300.0
H22 C2 C3 H31 70.4 60.1
H22 C2 C3 H32 190.4 180.0
C4 C3 C2 H21 70.5 60.0
C4 C3 C2 H22 310.4 300.0
C2 C3 C4 H31 120.0 120.0
C2 C3 C4 H32 240.0 240.0
H31 C3 C4 H32 120.0 120.0
C5 C4 C3 H41 240.0 239.9
C5 C4 C3 H42 120.0 120.0
C3 C4 C5 C6 164.7 180.0
C3 C4 C5 H51 284.8 300.0
C3 C4 C5 H52 44.8 60.0
H41 C4 C3 H42 240.0 240.1
H31 C3 C2 H21 190.4 180.0
H31 C3 C2 H22 70.4 60.1
C2 C3 H31 C4 243.9 240.0
C2 C3 H31 H32 121.9 120.0
C4 C3 H31 H32 238.0 240.0
H31 C3 C4 C5 19.0 60.0
H31 C3 C4 H41 139.0 180.1
H31 C3 C4 H42 259.0 300.0
H32 C3 C2 H21 310.5 300.0
H32 C3 C2 H22 190.4 180.0
C2 C3 H32 C4 116.1 120.0
C2 C3 H32 H31 238.0 240.1
C4 C3 H32 H31 122.0 120.0
H32 C3 C4 C5 259.0 300.0
H32 C3 C4 H41 19.0 60.1
H32 C3 C4 H42 139.0 180.0
C5 C4 C3 H31 19.0 60.0
C5 C4 C3 H32 259.0 300.0
C3 C4 C5 H41 120.0 120.0
C3 C4 C5 H42 240.0 240.0
H41 C4 C5 H42 120.0 120.0
C6 C5 C4 H51 240.0 240.0
C6 C5 C4 H52 120.0 120.0
C4 C5 C6 C7 158.3 180.0
C4 C5 C6 H61 278.3 299.9
C4 C5 C6 H62 38.3 60.0
H51 C5 C4 H52 240.0 240.0
H41 C4 C3 H31 139.0 180.1
H41 C4 C3 H32 19.0 60.1
C3 C4 H41 C5 238.2 240.0
C3 C4 H41 H42 119.1 120.0
C5 C4 H41 H42 240.9 240.0
H41 C4 C5 C6 44.7 60.0
H41 C4 C5 H51 164.7 180.0
H41 C4 C5 H52 284.8 299.9
H42 C4 C3 H31 259.0 300.0
H42 C4 C3 H32 139.0 180.0
C3 C4 H42 C5 121.8 120.0
C3 C4 H42 H41 240.9 240.0
C5 C4 H42 H41 119.1 120.0
H42 C4 C5 C6 284.7 300.0
H42 C4 C5 H51 44.8 60.0
H42 C4 C5 H52 164.8 180.0
C6 C5 C4 H41 44.7 60.0
C6 C5 C4 H42 284.7 300.0
C4 C5 C6 H51 120.0 119.9
C4 C5 C6 H52 240.0 240.0
H51 C5 C6 H52 120.0 120.0
C7 C6 C5 H61 240.0 240.1
C7 C6 C5 H62 120.0 120.0
C5 C6 C7 C8 247.8 180.0
C5 C6 C7 H71 7.8 300.0
C5 C6 C7 H72 127.8 60.0
H61 C6 C5 H62 240.0 239.9
H51 C5 C4 H41 164.7 180.0
H51 C5 C4 H42 44.8 60.0
C4 C5 H51 C6 238.7 240.0
C4 C5 H51 H52 119.4 120.0
C6 C5 H51 H52 240.7 239.9
H51 C5 C6 C7 38.3 60.1
H51 C5 C6 H61 158.3 180.0
H51 C5 C6 H62 278.3 300.1
H52 C5 C4 H41 284.8 299.9
H52 C5 C4 H42 164.8 180.0
C4 C5 H52 C6 121.3 120.0
C4 C5 H52 H51 240.6 240.0
C6 C5 H52 H51 119.3 120.0
H52 C5 C6 C7 278.3 300.0
H52 C5 C6 H61 38.3 60.0
H52 C5 C6 H62 158.3 180.0
C7 C6 C5 H51 38.3 60.1
C7 C6 C5 H52 278.3 300.0
C5 C6 C7 H61 120.0 120.0
C5 C6 C7 H62 240.0 240.0
H61 C6 C7 H62 120.0 120.0
C8 C7 C6 H71 240.0 240.0
C8 C7 C6 H72 120.0 119.9
C6 C7 C8 C9 146.0 180.0
C6 C7 C8 H81 266.0 300.0
C6 C7 C8 H82 26.0 60.0
H71 C7 C6 H72 240.0 239.9
H61 C6 C5 H51 158.3 180.0
H61 C6 C5 H52 38.3 60.0
C5 C6 H61 C7 237.4 240.1
C5 C6 H61 H62 118.7 120.1
C7 C6 H61 H62 241.3 240.0
H61 C6 C7 C8 127.8 60.0
H61 C6 C7 H71 247.8 180.0
H61 C6 C7 H72 7.8 300.1
H62 C6 C5 H51 278.3 300.1
H62 C6 C5 H52 158.3 180.0
C5 C6 H62 C7 122.6 120.0
C5 C6 H62 H61 241.3 240.0
C7 C6 H62 H61 118.7 120.0
H62 C6 C7 C8 7.8 300.0
H62 C6 C7 H71 127.8 60.0
H62 C6 C7 H72 247.8 180.0
C8 C7 C6 H61 127.8 60.0
C8 C7 C6 H62 7.8 300.0
C6 C7 C8 H71 120.0 120.0
C6 C7 C8 H72 240.0 240.1
H71 C7 C8 H72 120.0 120.0
C9 C8 C7 H81 240.0 240.0
C9 C8 C7 H82 120.0 120.0
C7 C8 C9 C10 246.8 180.0
C7 C8 C9 H91 6.8 300.0
C7 C8 C9 H92 126.8 60.0
H81 C8 C7 H82 240.0 239.9
H71 C7 C6 H61 247.8 180.0
H71 C7 C6 H62 127.8 60.0
C6 C7 H71 C8 238.3 240.0
C6 C7 H71 H72 119.1 120.0
C8 C7 H71 H72 240.9 240.0
H71 C7 C8 C9 26.0 60.0
H71 C7 C8 H81 146.0 179.9
H71 C7 C8 H82 266.0 300.0
H72 C7 C6 H61 7.8 300.1
H72 C7 C6 H62 247.8 180.0
C6 C7 H72 C8 121.8 119.9
C6 C7 H72 H71 240.9 239.9
C8 C7 H72 H71 119.1 120.0
H72 C7 C8 C9 266.0 299.9
H72 C7 C8 H81 26.0 59.9
H72 C7 C8 H82 146.0 180.0
C9 C8 C7 H71 26.0 60.0
C9 C8 C7 H72 266.0 299.9
C7 C8 C9 H81 120.0 120.0
C7 C8 C9 H82 240.0 240.0
H81 C8 C9 H82 120.0 120.0
C10 C9 C8 H91 240.0 240.0
C10 C9 C8 H92 120.0 120.0
C8 C9 C10 H101 180.0 300.0
C8 C9 C10 H102 300.0 60.0
C8 C9 C10 H103 60.0 180.0
H91 C9 C8 H92 240.0 240.1
H81 C8 C7 H71 146.0 179.9
H81 C8 C7 H72 26.0 59.9
C7 C8 H81 C9 238.2 240.0
C7 C8 H81 H82 119.1 120.0
C9 C8 H81 H82 240.9 240.0
H81 C8 C9 C10 126.8 60.0
H81 C8 C9 H91 246.8 180.0
H81 C8 C9 H92 6.8 300.0
H82 C8 C7 H71 266.0 300.0
H82 C8 C7 H72 146.0 180.0
C7 C8 H82 C9 121.8 120.0
C7 C8 H82 H81 240.9 239.9
C9 C8 H82 H81 119.1 119.9
H82 C8 C9 C10 6.8 300.0
H82 C8 C9 H91 126.8 60.0
H82 C8 C9 H92 246.8 180.0
C10 C9 C8 H81 126.8 60.0
C10 C9 C8 H82 6.8 300.0
C8 C9 C10 H91 120.0 120.0
C8 C9 C10 H92 240.0 240.0
H91 C9 C10 H92 120.0 120.0
H101 C10 C9 H102 240.0 240.0
H101 C10 C9 H103 120.0 120.1
H102 C10 C9 H103 240.0 240.1
H91 C9 C8 H81 246.8 180.0
H91 C9 C8 H82 126.8 60.0
C8 C9 H91 C10 239.0 240.0
C8 C9 H91 H92 119.5 120.0
C10 C9 H91 H92 240.5 240.0
H91 C9 C10 H101 60.0 180.0
H91 C9 C10 H102 180.0 300.0
H91 C9 C10 H103 300.0 60.0
H92 C9 C8 H81 6.8 300.0
H92 C9 C8 H82 246.8 180.0
C8 C9 H92 C10 121.0 120.0
C8 C9 H92 H91 240.5 240.1
C10 C9 H92 H91 119.5 120.0
H92 C9 C10 H101 300.0 60.0
H92 C9 C10 H102 60.0 180.0
H92 C9 C10 H103 180.0 300.0
H101 C10 C9 H91 60.0 180.0
H101 C10 C9 H92 300.0 60.0
C9 C10 H101 H102 120.0 120.0
C9 C10 H101 H103 240.0 240.0
H102 C10 H101 H103 120.0 120.0
H102 C10 C9 H91 180.0 300.0
H102 C10 C9 H92 60.0 180.0
C9 C10 H102 H101 240.0 240.0
C9 C10 H102 H103 120.0 120.0
H101 C10 H102 H103 240.0 240.0
H103 C10 C9 H91 300.0 60.0
H103 C10 C9 H92 180.0 300.0
C9 C10 H103 H101 120.0 120.0
C9 C10 H103 H102 240.0 240.0
H101 C10 H103 H102 120.0 120.0