PDB Chemical Component DHB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DHB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.380 1.397
C1 C6 1.388 1.398
C1 C 1.462 1.474
C2 C3 1.392 1.381
C2 H2 1.102 1.080
C3 O3 1.413 1.360
C3 C4 1.390 1.393
O3 HO3 0.951 0.966
C4 O4 1.380 1.357
C4 C5 1.370 1.389
O4 HO4 0.950 0.966
C5 C6 1.380 1.377
C5 H5 1.103 1.079
C6 H6 1.103 1.079
C O1 1.182 1.216
C O2 1.348 1.347
O2 HO2 0.950 0.968

Bond Angles for DHB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 119.9 119.9
C2 C1 C 120.7 120.1
C1 C2 C3 121.2 119.8
C1 C2 H2 118.9 120.1
C6 C1 C 119.2 120.0
C1 C6 C5 119.3 120.0
C1 C6 H6 120.6 120.0
C1 C O1 121.8 120.0
C1 C O2 122.0 120.1
C3 C2 H2 119.8 120.1
C2 C3 O3 120.4 120.0
C2 C3 C4 117.7 120.0
O3 C3 C4 121.9 120.0
C3 O3 HO3 120.5 106.8
C3 C4 O4 121.5 120.0
C3 C4 C5 121.4 120.1
O4 C4 C5 117.1 119.9
C4 O4 HO4 121.5 106.8
C4 C5 C6 120.4 120.1
C4 C5 H5 119.4 119.9
C6 C5 H5 120.2 119.9
C5 C6 H6 120.0 120.0
O1 C O2 116.1 120.0
C O2 HO2 122.0 120.0

Torsion Angles for DHB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C 175.0 179.8
C2 C1 C6 C5 359.2 0.2
C2 C1 C6 H6 179.2 180.2
C2 C1 C O1 353.7 359.8
C2 C1 C O2 169.7 179.7
C3 C2 C1 H2 180.0 179.5
C1 C2 C3 O3 180.1 180.3
C1 C2 C3 C4 0.7 0.5
C2 C1 C6 C 184.9 180.2
C6 C1 C2 C3 1.0 359.5
C6 C1 C2 H2 180.9 180.0
C6 C1 C O1 178.7 180.0
C6 C1 C O2 354.7 360.0
C4 C5 C6 C1 359.0 360.0
C1 C6 C5 H5 179.0 180.0
C5 C6 C1 H6 179.9 180.0
C2 C1 C C6 175.0 179.8
C C1 C2 C3 186.0 179.7
C C1 C2 H2 5.9 0.2
C C1 C6 C5 174.3 180.0
C C1 C6 H6 354.3 0.0
O1 C C1 O2 184.0 180.0
C1 C O2 HO2 180.0 180.0
C3 C2 C1 C6 1.0 359.5
C3 C2 C1 C 186.0 179.7
C1 C2 C3 H2 180.0 180.5
O3 C3 C2 C4 179.4 179.8
C2 C3 O3 HO3 180.0 270.2
C2 C3 C4 O4 176.4 179.8
C2 C3 C4 C5 357.4 359.8
H2 C2 C1 C6 180.9 180.0
H2 C2 C1 C 5.9 0.2
C1 C2 H2 C3 180.0 179.5
H2 C2 C3 O3 0.2 359.8
H2 C2 C3 C4 180.7 180.0
O3 C3 C2 H2 0.2 359.8
C2 C3 O3 C4 180.6 180.2
O3 C3 C4 O4 356.9 360.0
O3 C3 C4 C5 178.0 180.0
C4 C3 C2 H2 180.7 180.0
C2 C3 C4 O3 179.4 179.8
C4 C3 O3 HO3 359.5 90.0
O4 C4 C3 C5 178.9 180.0
C3 C4 O4 HO4 180.0 270.0
C3 C4 C5 C6 2.8 0.0
C3 C4 C5 H5 182.8 180.0
HO3 O3 C3 C4 359.5 90.0
C3 C4 O4 C5 181.0 180.0
O4 C4 C5 C6 183.8 180.0
O4 C4 C5 H5 3.8 360.0
C1 C6 C5 C4 359.0 360.0
C3 C4 C5 O4 179.0 180.0
C5 C4 O4 HO4 359.0 90.0
C6 C5 C4 H5 180.0 180.0
C4 C5 C6 H6 178.9 180.0
HO4 O4 C4 C5 359.0 90.0
C5 C6 C1 C 174.3 180.0
C1 C6 C5 H6 180.1 180.0
C4 C5 C6 H5 180.0 180.0
C4 C5 H5 C6 180.0 180.0
H5 C5 C6 H6 358.9 0.0
H6 C6 C1 C 354.3 0.0
C1 C6 H6 C5 179.9 180.0
H6 C6 C5 H5 358.9 0.0
C1 C O1 O2 176.2 180.0
O1 C O2 HO2 356.2 360.0
C1 C O2 O1 183.8 180.0