PDB Chemical Component DG2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for DG2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O15 P6 1.510 1.479
O13 P6 1.509 1.610
P6 O14 1.509 1.610
P6 O5 1.611 1.610
O5 C4 1.446 1.429
C4 C3 1.538 1.530
O7 C7 1.268 1.208
C3 C7 1.527 1.507
C3 O2 1.470 1.429
C7 O8 1.261 1.341
O2 P1 1.613 1.610
O11 P1 1.511 1.480
P1 O9 1.509 1.610
P1 O10 1.510 1.610
C3 H1 1.100 1.089
C4 H2 1.100 1.090
C4 H3 1.100 1.090
O8 H4 0.949 0.968
O9 H5 0.951 0.967
O10 H6 0.950 0.967
O14 H7 0.949 0.967
O13 H8 0.950 0.967

Bond Angles for DG2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O15 P6 O14 114.3 109.5
P6 O14 H7 109.5 114.0
O5 C4 H2 109.1 109.5
O5 C4 H3 109.1 109.5
C4 C3 C7 104.2 109.5
C4 C3 O2 112.4 109.4
C4 C3 H1 108.0 109.5
C3 C7 O7 120.6 120.0
O7 C7 O8 121.8 120.0
O2 C3 C7 114.9 109.5
C3 C7 O8 117.5 120.0
C7 C3 H1 108.1 109.5
C3 O2 P1 131.5 123.0
O2 C3 H1 108.9 109.5
C7 O8 H4 109.5 117.0
O2 P1 O11 104.5 109.5
O2 P1 O9 103.8 109.5
O2 P1 O10 103.6 109.5
P1 O9 H5 109.5 113.9
P1 O10 H6 109.5 114.0
H2 C4 H3 109.5 109.4

Torsion Angles for DG2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O15 P6 O14 H7 360.0 180.0
O13 P6 O14 H7 231.7 300.0
P6 O5 C4 H2 296.8 60.0
P6 O5 C4 H3 56.4 300.0
O5 C4 C3 C7 300.0 54.9
O5 C4 C3 H1 54.8 175.0
H2 C4 O5 H3 240.4 120.0
C4 C3 C7 O7 279.8 245.0
O2 C3 C4 C7 234.9 240.0
C4 C3 C7 O8 97.5 65.0
C7 C3 C4 H1 245.2 240.0
C4 C3 O2 P1 235.0 240.0
O2 C3 C4 H1 120.1 120.0
O2 C3 C7 O7 43.2 5.0
C3 C7 O7 O8 177.6 180.0
O7 C7 C3 H1 165.1 125.0
O7 C7 O8 H4 0.0 360.0
C4 C3 C7 O2 236.6 240.1
C4 C3 C7 H1 114.7 120.1
O7 C7 C3 O8 182.3 180.0
C7 C3 O2 P1 116.0 120.0
O2 C3 C7 H1 238.2 240.0
C3 C7 O8 H4 182.4 180.0
C4 C3 O2 C7 119.0 120.0
C4 C3 O2 H1 240.4 240.0
O2 C3 C7 O8 220.9 185.0
C7 C3 O2 H1 121.4 120.0
C3 O2 P1 O11 104.8 305.0
C3 O2 P1 O9 224.0 65.0
C3 O2 P1 O10 344.2 185.1
C3 C7 O8 O7 182.4 180.0
O8 C7 C3 H1 342.7 305.0
P1 O2 C3 C7 116.0 120.0
P1 O2 C3 H1 354.6 360.0
O2 P1 O9 H5 247.2 60.1
O2 P1 O10 H6 113.3 180.0
O2 P1 O11 O9 112.4 120.0
O2 P1 O11 O10 247.2 240.0
O11 P1 O9 H5 0.0 180.0
O11 P1 O10 H6 360.0 60.0
O2 P1 O9 O11 247.1 240.0
O2 P1 O9 O10 112.4 120.1
O2 P1 O10 O11 113.3 120.0
O2 P1 O10 O9 247.5 240.0
O10 P1 O9 H5 134.8 300.0
C4 C3 H1 C7 247.8 240.0
C4 C3 H1 O2 122.3 120.0
H1 C3 C7 O7 165.1 125.0
O2 C3 H1 C7 125.5 120.0
H1 C3 C7 O8 342.7 305.0
H1 C3 O2 P1 354.6 360.0
O5 C4 H2 H3 119.4 240.0
H2 C4 C3 C7 179.8 175.0
H2 C4 C3 O2 54.7 55.1
H2 C4 C3 H1 294.6 295.1
O5 C4 H3 H2 240.6 120.1
H3 C4 C3 C7 60.1 295.0
H3 C4 C3 O2 295.1 175.0
H3 C4 C3 H1 175.0 55.0