PDB Chemical Component DFB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for DFB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C7 |
1.272 |
1.428 |
O1 |
HO1 |
0.950 |
0.967 |
C7 |
C1 |
1.471 |
1.507 |
C7 |
HC71 |
1.115 |
1.089 |
C7 |
HC72 |
1.115 |
1.090 |
C1 |
C2 |
1.464 |
1.383 |
C1 |
C6 |
1.392 |
1.381 |
C2 |
F2 |
1.323 |
1.351 |
C2 |
C3 |
1.452 |
1.387 |
C6 |
C5 |
1.385 |
1.382 |
C6 |
HC6 |
1.103 |
1.080 |
C5 |
C4 |
1.385 |
1.382 |
C5 |
HC5 |
1.103 |
1.080 |
C4 |
C3 |
1.370 |
1.384 |
C4 |
HC4 |
1.103 |
1.080 |
C3 |
F3 |
1.326 |
1.350 |
Bond Angles for DFB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
O1 |
HO1 |
119.5 |
106.9 |
O1 |
C7 |
C1 |
119.5 |
109.5 |
O1 |
C7 |
HC71 |
108.6 |
109.5 |
O1 |
C7 |
HC72 |
108.6 |
109.5 |
C1 |
C7 |
HC71 |
108.6 |
109.5 |
C1 |
C7 |
HC72 |
108.6 |
109.5 |
C7 |
C1 |
C2 |
126.1 |
120.0 |
C7 |
C1 |
C6 |
116.0 |
120.0 |
HC71 |
C7 |
HC72 |
101.4 |
109.4 |
C2 |
C1 |
C6 |
117.7 |
120.0 |
C1 |
C2 |
F2 |
125.1 |
120.0 |
C1 |
C2 |
C3 |
118.6 |
119.9 |
C1 |
C6 |
C5 |
121.2 |
120.1 |
C1 |
C6 |
HC6 |
119.7 |
120.0 |
F2 |
C2 |
C3 |
116.3 |
120.0 |
C2 |
C3 |
C4 |
120.3 |
119.9 |
C2 |
C3 |
F3 |
117.5 |
120.1 |
C5 |
C6 |
HC6 |
119.1 |
119.9 |
C6 |
C5 |
C4 |
122.2 |
120.0 |
C6 |
C5 |
HC5 |
118.9 |
120.0 |
C4 |
C5 |
HC5 |
118.9 |
120.0 |
C5 |
C4 |
C3 |
119.9 |
120.0 |
C5 |
C4 |
HC4 |
120.6 |
120.0 |
C3 |
C4 |
HC4 |
119.5 |
120.0 |
C4 |
C3 |
F3 |
122.3 |
120.0 |
Torsion Angles for DFB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C7 |
O1 |
HC71 |
125.3 |
240.0 |
C1 |
C7 |
O1 |
HC72 |
234.8 |
120.0 |
O1 |
C7 |
C1 |
C2 |
82.4 |
179.7 |
O1 |
C7 |
C1 |
C6 |
266.3 |
360.0 |
HC71 |
C7 |
O1 |
HC72 |
109.5 |
240.1 |
HO1 |
O1 |
C7 |
C1 |
180.0 |
180.0 |
HO1 |
O1 |
C7 |
HC71 |
54.7 |
300.0 |
HO1 |
O1 |
C7 |
HC72 |
305.2 |
60.0 |
C1 |
C7 |
O1 |
HO1 |
180.0 |
180.0 |
O1 |
C7 |
C1 |
HC71 |
234.7 |
120.0 |
O1 |
C7 |
C1 |
HC72 |
125.3 |
240.0 |
HC71 |
C7 |
C1 |
HC72 |
250.5 |
120.0 |
C2 |
C1 |
C7 |
C6 |
176.1 |
179.8 |
C7 |
C1 |
C2 |
F2 |
3.2 |
0.2 |
C7 |
C1 |
C2 |
C3 |
184.5 |
179.8 |
C7 |
C1 |
C6 |
C5 |
176.8 |
180.0 |
C7 |
C1 |
C6 |
HC6 |
356.8 |
359.9 |
HC71 |
C7 |
O1 |
HO1 |
54.7 |
300.0 |
O1 |
C7 |
HC71 |
C1 |
131.4 |
240.0 |
O1 |
C7 |
HC71 |
HC72 |
245.7 |
120.0 |
C1 |
C7 |
HC71 |
HC72 |
114.2 |
240.0 |
HC71 |
C7 |
C1 |
C2 |
207.7 |
59.7 |
HC71 |
C7 |
C1 |
C6 |
31.6 |
240.0 |
HC72 |
C7 |
O1 |
HO1 |
305.2 |
60.0 |
O1 |
C7 |
HC72 |
C1 |
228.6 |
120.0 |
O1 |
C7 |
HC72 |
HC71 |
114.3 |
240.0 |
C1 |
C7 |
HC72 |
HC71 |
245.7 |
120.0 |
HC72 |
C7 |
C1 |
C2 |
317.2 |
299.7 |
HC72 |
C7 |
C1 |
C6 |
141.1 |
120.0 |
C2 |
C1 |
C7 |
HC71 |
207.7 |
59.7 |
C2 |
C1 |
C7 |
HC72 |
317.2 |
299.7 |
C7 |
C1 |
C2 |
C6 |
183.9 |
180.2 |
C2 |
C1 |
C6 |
C5 |
0.3 |
0.3 |
C2 |
C1 |
C6 |
HC6 |
180.3 |
180.2 |
F2 |
C2 |
C1 |
C3 |
178.6 |
180.4 |
C1 |
C2 |
C3 |
C4 |
359.2 |
0.4 |
C1 |
C2 |
C3 |
F3 |
179.4 |
180.2 |
C6 |
C1 |
C7 |
HC71 |
31.6 |
240.0 |
C6 |
C1 |
C7 |
HC72 |
141.1 |
120.0 |
C7 |
C1 |
C6 |
C2 |
176.5 |
179.8 |
C6 |
C1 |
C2 |
F2 |
179.2 |
180.0 |
C6 |
C1 |
C2 |
C3 |
0.6 |
359.5 |
C5 |
C6 |
C1 |
HC6 |
180.0 |
180.1 |
C1 |
C6 |
C5 |
C4 |
358.8 |
360.0 |
C1 |
C6 |
C5 |
HC5 |
178.8 |
180.0 |
F2 |
C2 |
C1 |
C6 |
179.2 |
180.0 |
C1 |
C2 |
F2 |
C3 |
181.4 |
179.6 |
F2 |
C2 |
C3 |
C4 |
180.5 |
180.0 |
F2 |
C2 |
C3 |
F3 |
0.7 |
359.8 |
C3 |
C2 |
C1 |
C6 |
0.6 |
359.5 |
C1 |
C2 |
C3 |
F2 |
178.7 |
180.4 |
C5 |
C4 |
C3 |
C2 |
0.0 |
359.8 |
C2 |
C3 |
C4 |
HC4 |
180.0 |
179.8 |
C4 |
C3 |
C2 |
F3 |
179.8 |
180.2 |
C1 |
C6 |
C5 |
HC6 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
HC5 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
C3 |
1.0 |
360.0 |
C6 |
C5 |
C4 |
HC4 |
181.0 |
180.0 |
C1 |
C6 |
HC6 |
C5 |
180.0 |
180.1 |
HC6 |
C6 |
C5 |
C4 |
178.9 |
180.0 |
HC6 |
C6 |
C5 |
HC5 |
358.8 |
0.1 |
C2 |
C3 |
C4 |
C5 |
0.0 |
359.8 |
C4 |
C5 |
C6 |
HC6 |
178.9 |
180.0 |
C6 |
C5 |
C4 |
HC5 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
HC4 |
180.0 |
180.0 |
C5 |
C4 |
C3 |
F3 |
179.8 |
180.0 |
HC5 |
C5 |
C6 |
HC6 |
358.8 |
0.1 |
C6 |
C5 |
HC5 |
C4 |
180.0 |
180.0 |
HC5 |
C5 |
C4 |
C3 |
181.0 |
180.0 |
HC5 |
C5 |
C4 |
HC4 |
1.0 |
360.0 |
C2 |
C3 |
C4 |
F3 |
180.2 |
179.8 |
C3 |
C4 |
C5 |
HC5 |
181.0 |
180.0 |
C5 |
C4 |
C3 |
HC4 |
180.0 |
180.0 |
HC4 |
C4 |
C5 |
HC5 |
1.0 |
360.0 |
C5 |
C4 |
HC4 |
C3 |
180.0 |
180.0 |
HC4 |
C4 |
C3 |
F3 |
359.8 |
360.0 |
C2 |
C3 |
F3 |
C4 |
179.8 |
180.2 |
F3 |
C3 |
C4 |
HC4 |
359.8 |
360.0 |