PDB Chemical Component BUB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for BUB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2   1.530
C1 H11   1.090
C1 H12   1.090
C1 H13   1.090
C2 C6 1.517 1.531
C2 H21 1.100 1.090
C2 H22 1.100 1.090
C6 C9 1.504 1.530
C6 H61 1.100 1.090
C6 H62 1.100 1.090
C9 B12 1.585 1.569
C9 H91 1.100 1.090
C9 H92 1.100 1.090
B12 O15 1.350 1.420
B12 O16 1.393 1.421
O15 HO15 0.950 0.967
O16 HO16 0.950 0.966

Bond Angles for BUB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 H11   109.4
C2 C1 H12   109.5
C2 C1 H13   109.5
C1 C2 C6   109.5
C1 C2 H21   109.5
C1 C2 H22   109.5
H11 C1 H12   109.5
H11 C1 H13   109.5
H12 C1 H13   109.5
C6 C2 H21 123.9 109.4
C6 C2 H22 123.9 109.4
C2 C6 C9 139.8 109.5
C2 C6 H61 101.5 109.4
C2 C6 H62 101.4 109.4
H21 C2 H22 109.5 109.5
C9 C6 H61 101.4 109.5
C9 C6 H62 101.4 109.5
C6 C9 B12 115.2 109.5
C6 C9 H91 108.0 109.5
C6 C9 H92 108.0 109.5
H61 C6 H62 109.5 109.5
B12 C9 H91 108.0 109.5
B12 C9 H92 108.0 109.5
C9 B12 O15 104.3 120.0
C9 B12 O16 122.1 120.0
H91 C9 H92 109.5 109.5
O15 B12 O16 106.0 119.9
B12 O15 HO15 109.5 114.0
B12 O16 HO16 109.5 114.0

Torsion Angles for BUB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H11 C1 C2 H12   240.0
H11 C1 C2 H13   120.0
H12 C1 C2 H13   240.0
C6 C2 C1 H21   240.0
C6 C2 C1 H22   120.0
C1 C2 C6 C9   180.0
C1 C2 C6 H61   300.0
C1 C2 C6 H62   60.0
H21 C2 C1 H22   239.9
C2 C1 H11 H12   120.0
C2 C1 H11 H13   240.0
H11 C1 C2 C6   180.0
H11 C1 C2 H21   300.0
H11 C1 C2 H22   60.0
H12 C1 H11 H13   120.0
C2 C1 H12 H11   240.0
C2 C1 H12 H13   120.0
H12 C1 C2 C6   300.0
H12 C1 C2 H21   60.0
H12 C1 C2 H22   180.0
H11 C1 H12 H13   240.0
C2 C1 H13 H11   120.0
C2 C1 H13 H12   240.0
H13 C1 C2 C6   60.0
H13 C1 C2 H21   180.0
H13 C1 C2 H22   300.0
H11 C1 H13 H12   120.0
C6 C2 C1 H11   180.0
C6 C2 C1 H12   300.0
C6 C2 C1 H13   60.0
C1 C2 C6 H21   120.0
C1 C2 C6 H22   240.0
H21 C2 C6 H22 159.5 119.9
C9 C6 C2 H61 236.4 240.0
C9 C6 C2 H62 123.6 120.0
C2 C6 C9 B12 1.4 180.0
C2 C6 C9 H91 122.2 300.0
C2 C6 C9 H92 240.6 60.0
H61 C6 C2 H62 247.2 240.1
H21 C2 C1 H11   300.0
H21 C2 C1 H12   60.0
H21 C2 C1 H13   180.0
C1 C2 H21 C6   240.0
C1 C2 H21 H22   120.1
C6 C2 H21 H22 197.9 240.1
H21 C2 C6 C9 254.7 60.0
H21 C2 C6 H61 18.3 180.0
H21 C2 C6 H62 131.2 299.9
H22 C2 C1 H11   60.0
H22 C2 C1 H12   180.0
H22 C2 C1 H13   300.0
C1 C2 H22 C6   120.0
C1 C2 H22 H21   239.9
C6 C2 H22 H21 162.1 119.9
H22 C2 C6 C9 95.2 300.0
H22 C2 C6 H61 218.8 60.1
H22 C2 C6 H62 331.6 180.0
C9 C6 C2 H21 254.7 60.0
C9 C6 C2 H22 95.2 300.0
C2 C6 C9 H61 123.6 120.0
C2 C6 C9 H62 236.4 240.0
H61 C6 C9 H62 112.8 120.1
B12 C9 C6 H91 239.2 240.0
B12 C9 C6 H92 120.8 120.0
C6 C9 B12 O15 61.2 -0.0
C6 C9 B12 O16 301.5 180.0
H91 C9 C6 H92 241.6 240.0
H61 C6 C2 H21 18.3 180.0
H61 C6 C2 H22 218.8 60.1
C2 C6 H61 C9 213.3 240.0
C2 C6 H61 H62 106.6 119.9
C9 C6 H61 H62 253.4 239.9
H61 C6 C9 B12 237.8 60.0
H61 C6 C9 H91 358.6 180.0
H61 C6 C9 H92 117.0 300.0
H62 C6 C2 H21 131.2 299.9
H62 C6 C2 H22 331.6 180.0
C2 C6 H62 C9 146.7 120.0
C2 C6 H62 H61 253.4 240.1
C9 C6 H62 H61 106.6 120.1
H62 C6 C9 B12 125.0 300.0
H62 C6 C9 H91 245.8 60.0
H62 C6 C9 H92 4.2 180.0
B12 C9 C6 H61 237.8 60.0
B12 C9 C6 H62 125.0 300.0
C6 C9 B12 H91 120.9 120.0
C6 C9 B12 H92 239.2 240.0
H91 C9 B12 H92 118.3 120.0
O15 B12 C9 O16 119.6 180.0
C9 B12 O15 HO15 180.0 180.0
C9 B12 O16 HO16 180.0 180.0
H91 C9 C6 H61 358.6 180.0
H91 C9 C6 H62 245.8 60.0
C6 C9 H91 B12 234.8 240.0
C6 C9 H91 H92 117.4 120.0
B12 C9 H91 H92 242.7 240.0
H91 C9 B12 O15 300.3 240.0
H91 C9 B12 O16 180.7 60.0
H92 C9 C6 H61 117.0 300.0
H92 C9 C6 H62 4.2 180.0
C6 C9 H92 B12 125.2 120.0
C6 C9 H92 H91 242.6 240.0
B12 C9 H92 H91 117.4 120.0
H92 C9 B12 O15 182.0 120.0
H92 C9 B12 O16 62.3 300.0
O15 B12 C9 H91 300.3 240.0
O15 B12 C9 H92 182.0 120.0
C9 B12 O15 O16 230.0 180.0
O15 B12 O16 HO16 61.2 -0.0
O16 B12 C9 H91 180.7 60.0
O16 B12 C9 H92 62.3 300.0
C9 B12 O16 O15 118.8 180.0
O16 B12 O15 HO15 310.0 -0.0
HO15 O15 B12 O16 310.0 -0.0