PDB Chemical Component BUB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for BUB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
|
1.530 |
C1 |
H11 |
|
1.090 |
C1 |
H12 |
|
1.090 |
C1 |
H13 |
|
1.090 |
C2 |
C6 |
1.517 |
1.531 |
C2 |
H21 |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.090 |
C6 |
C9 |
1.504 |
1.530 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.090 |
C9 |
B12 |
1.585 |
1.569 |
C9 |
H91 |
1.100 |
1.090 |
C9 |
H92 |
1.100 |
1.090 |
B12 |
O15 |
1.350 |
1.420 |
B12 |
O16 |
1.393 |
1.421 |
O15 |
HO15 |
0.950 |
0.967 |
O16 |
HO16 |
0.950 |
0.966 |
Bond Angles for BUB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
H11 |
|
109.4 |
C2 |
C1 |
H12 |
|
109.5 |
C2 |
C1 |
H13 |
|
109.5 |
C1 |
C2 |
C6 |
|
109.5 |
C1 |
C2 |
H21 |
|
109.5 |
C1 |
C2 |
H22 |
|
109.5 |
H11 |
C1 |
H12 |
|
109.5 |
H11 |
C1 |
H13 |
|
109.5 |
H12 |
C1 |
H13 |
|
109.5 |
C6 |
C2 |
H21 |
123.9 |
109.4 |
C6 |
C2 |
H22 |
123.9 |
109.4 |
C2 |
C6 |
C9 |
139.8 |
109.5 |
C2 |
C6 |
H61 |
101.5 |
109.4 |
C2 |
C6 |
H62 |
101.4 |
109.4 |
H21 |
C2 |
H22 |
109.5 |
109.5 |
C9 |
C6 |
H61 |
101.4 |
109.5 |
C9 |
C6 |
H62 |
101.4 |
109.5 |
C6 |
C9 |
B12 |
115.2 |
109.5 |
C6 |
C9 |
H91 |
108.0 |
109.5 |
C6 |
C9 |
H92 |
108.0 |
109.5 |
H61 |
C6 |
H62 |
109.5 |
109.5 |
B12 |
C9 |
H91 |
108.0 |
109.5 |
B12 |
C9 |
H92 |
108.0 |
109.5 |
C9 |
B12 |
O15 |
104.3 |
120.0 |
C9 |
B12 |
O16 |
122.1 |
120.0 |
H91 |
C9 |
H92 |
109.5 |
109.5 |
O15 |
B12 |
O16 |
106.0 |
119.9 |
B12 |
O15 |
HO15 |
109.5 |
114.0 |
B12 |
O16 |
HO16 |
109.5 |
114.0 |
Torsion Angles for BUB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H11 |
C1 |
C2 |
H12 |
|
240.0 |
H11 |
C1 |
C2 |
H13 |
|
120.0 |
H12 |
C1 |
C2 |
H13 |
|
240.0 |
C6 |
C2 |
C1 |
H21 |
|
240.0 |
C6 |
C2 |
C1 |
H22 |
|
120.0 |
C1 |
C2 |
C6 |
C9 |
|
180.0 |
C1 |
C2 |
C6 |
H61 |
|
300.0 |
C1 |
C2 |
C6 |
H62 |
|
60.0 |
H21 |
C2 |
C1 |
H22 |
|
239.9 |
C2 |
C1 |
H11 |
H12 |
|
120.0 |
C2 |
C1 |
H11 |
H13 |
|
240.0 |
H11 |
C1 |
C2 |
C6 |
|
180.0 |
H11 |
C1 |
C2 |
H21 |
|
300.0 |
H11 |
C1 |
C2 |
H22 |
|
60.0 |
H12 |
C1 |
H11 |
H13 |
|
120.0 |
C2 |
C1 |
H12 |
H11 |
|
240.0 |
C2 |
C1 |
H12 |
H13 |
|
120.0 |
H12 |
C1 |
C2 |
C6 |
|
300.0 |
H12 |
C1 |
C2 |
H21 |
|
60.0 |
H12 |
C1 |
C2 |
H22 |
|
180.0 |
H11 |
C1 |
H12 |
H13 |
|
240.0 |
C2 |
C1 |
H13 |
H11 |
|
120.0 |
C2 |
C1 |
H13 |
H12 |
|
240.0 |
H13 |
C1 |
C2 |
C6 |
|
60.0 |
H13 |
C1 |
C2 |
H21 |
|
180.0 |
H13 |
C1 |
C2 |
H22 |
|
300.0 |
H11 |
C1 |
H13 |
H12 |
|
120.0 |
C6 |
C2 |
C1 |
H11 |
|
180.0 |
C6 |
C2 |
C1 |
H12 |
|
300.0 |
C6 |
C2 |
C1 |
H13 |
|
60.0 |
C1 |
C2 |
C6 |
H21 |
|
120.0 |
C1 |
C2 |
C6 |
H22 |
|
240.0 |
H21 |
C2 |
C6 |
H22 |
159.5 |
119.9 |
C9 |
C6 |
C2 |
H61 |
236.4 |
240.0 |
C9 |
C6 |
C2 |
H62 |
123.6 |
120.0 |
C2 |
C6 |
C9 |
B12 |
1.4 |
180.0 |
C2 |
C6 |
C9 |
H91 |
122.2 |
300.0 |
C2 |
C6 |
C9 |
H92 |
240.6 |
60.0 |
H61 |
C6 |
C2 |
H62 |
247.2 |
240.1 |
H21 |
C2 |
C1 |
H11 |
|
300.0 |
H21 |
C2 |
C1 |
H12 |
|
60.0 |
H21 |
C2 |
C1 |
H13 |
|
180.0 |
C1 |
C2 |
H21 |
C6 |
|
240.0 |
C1 |
C2 |
H21 |
H22 |
|
120.1 |
C6 |
C2 |
H21 |
H22 |
197.9 |
240.1 |
H21 |
C2 |
C6 |
C9 |
254.7 |
60.0 |
H21 |
C2 |
C6 |
H61 |
18.3 |
180.0 |
H21 |
C2 |
C6 |
H62 |
131.2 |
299.9 |
H22 |
C2 |
C1 |
H11 |
|
60.0 |
H22 |
C2 |
C1 |
H12 |
|
180.0 |
H22 |
C2 |
C1 |
H13 |
|
300.0 |
C1 |
C2 |
H22 |
C6 |
|
120.0 |
C1 |
C2 |
H22 |
H21 |
|
239.9 |
C6 |
C2 |
H22 |
H21 |
162.1 |
119.9 |
H22 |
C2 |
C6 |
C9 |
95.2 |
300.0 |
H22 |
C2 |
C6 |
H61 |
218.8 |
60.1 |
H22 |
C2 |
C6 |
H62 |
331.6 |
180.0 |
C9 |
C6 |
C2 |
H21 |
254.7 |
60.0 |
C9 |
C6 |
C2 |
H22 |
95.2 |
300.0 |
C2 |
C6 |
C9 |
H61 |
123.6 |
120.0 |
C2 |
C6 |
C9 |
H62 |
236.4 |
240.0 |
H61 |
C6 |
C9 |
H62 |
112.8 |
120.1 |
B12 |
C9 |
C6 |
H91 |
239.2 |
240.0 |
B12 |
C9 |
C6 |
H92 |
120.8 |
120.0 |
C6 |
C9 |
B12 |
O15 |
61.2 |
-0.0 |
C6 |
C9 |
B12 |
O16 |
301.5 |
180.0 |
H91 |
C9 |
C6 |
H92 |
241.6 |
240.0 |
H61 |
C6 |
C2 |
H21 |
18.3 |
180.0 |
H61 |
C6 |
C2 |
H22 |
218.8 |
60.1 |
C2 |
C6 |
H61 |
C9 |
213.3 |
240.0 |
C2 |
C6 |
H61 |
H62 |
106.6 |
119.9 |
C9 |
C6 |
H61 |
H62 |
253.4 |
239.9 |
H61 |
C6 |
C9 |
B12 |
237.8 |
60.0 |
H61 |
C6 |
C9 |
H91 |
358.6 |
180.0 |
H61 |
C6 |
C9 |
H92 |
117.0 |
300.0 |
H62 |
C6 |
C2 |
H21 |
131.2 |
299.9 |
H62 |
C6 |
C2 |
H22 |
331.6 |
180.0 |
C2 |
C6 |
H62 |
C9 |
146.7 |
120.0 |
C2 |
C6 |
H62 |
H61 |
253.4 |
240.1 |
C9 |
C6 |
H62 |
H61 |
106.6 |
120.1 |
H62 |
C6 |
C9 |
B12 |
125.0 |
300.0 |
H62 |
C6 |
C9 |
H91 |
245.8 |
60.0 |
H62 |
C6 |
C9 |
H92 |
4.2 |
180.0 |
B12 |
C9 |
C6 |
H61 |
237.8 |
60.0 |
B12 |
C9 |
C6 |
H62 |
125.0 |
300.0 |
C6 |
C9 |
B12 |
H91 |
120.9 |
120.0 |
C6 |
C9 |
B12 |
H92 |
239.2 |
240.0 |
H91 |
C9 |
B12 |
H92 |
118.3 |
120.0 |
O15 |
B12 |
C9 |
O16 |
119.6 |
180.0 |
C9 |
B12 |
O15 |
HO15 |
180.0 |
180.0 |
C9 |
B12 |
O16 |
HO16 |
180.0 |
180.0 |
H91 |
C9 |
C6 |
H61 |
358.6 |
180.0 |
H91 |
C9 |
C6 |
H62 |
245.8 |
60.0 |
C6 |
C9 |
H91 |
B12 |
234.8 |
240.0 |
C6 |
C9 |
H91 |
H92 |
117.4 |
120.0 |
B12 |
C9 |
H91 |
H92 |
242.7 |
240.0 |
H91 |
C9 |
B12 |
O15 |
300.3 |
240.0 |
H91 |
C9 |
B12 |
O16 |
180.7 |
60.0 |
H92 |
C9 |
C6 |
H61 |
117.0 |
300.0 |
H92 |
C9 |
C6 |
H62 |
4.2 |
180.0 |
C6 |
C9 |
H92 |
B12 |
125.2 |
120.0 |
C6 |
C9 |
H92 |
H91 |
242.6 |
240.0 |
B12 |
C9 |
H92 |
H91 |
117.4 |
120.0 |
H92 |
C9 |
B12 |
O15 |
182.0 |
120.0 |
H92 |
C9 |
B12 |
O16 |
62.3 |
300.0 |
O15 |
B12 |
C9 |
H91 |
300.3 |
240.0 |
O15 |
B12 |
C9 |
H92 |
182.0 |
120.0 |
C9 |
B12 |
O15 |
O16 |
230.0 |
180.0 |
O15 |
B12 |
O16 |
HO16 |
61.2 |
-0.0 |
O16 |
B12 |
C9 |
H91 |
180.7 |
60.0 |
O16 |
B12 |
C9 |
H92 |
62.3 |
300.0 |
C9 |
B12 |
O16 |
O15 |
118.8 |
180.0 |
O16 |
B12 |
O15 |
HO15 |
310.0 |
-0.0 |
HO15 |
O15 |
B12 |
O16 |
310.0 |
-0.0 |