PDB Chemical Component ARB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ARB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.490 |
1.530 |
C1 |
O1 |
1.381 |
1.429 |
C1 |
O5 |
1.457 |
1.426 |
C1 |
H1 |
1.115 |
1.090 |
C2 |
C3 |
1.463 |
1.533 |
C2 |
O2 |
1.474 |
1.429 |
C2 |
H2 |
1.114 |
1.090 |
C3 |
C4 |
1.563 |
1.532 |
C3 |
O3 |
1.457 |
1.429 |
C3 |
H3 |
1.115 |
1.090 |
C4 |
C5 |
1.577 |
1.530 |
C4 |
O4 |
1.483 |
1.428 |
C4 |
H4 |
1.116 |
1.091 |
C5 |
O5 |
1.438 |
1.425 |
C5 |
H51 |
1.115 |
1.089 |
C5 |
H52 |
1.115 |
1.090 |
O1 |
HO1 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.968 |
O3 |
HO3 |
0.951 |
0.967 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for ARB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
110.2 |
109.4 |
C2 |
C1 |
O5 |
113.2 |
109.8 |
C2 |
C1 |
H1 |
105.1 |
109.5 |
C1 |
C2 |
C3 |
112.9 |
109.1 |
C1 |
C2 |
O2 |
108.0 |
109.5 |
C1 |
C2 |
H2 |
106.5 |
109.5 |
O1 |
C1 |
O5 |
104.9 |
109.4 |
O1 |
C1 |
H1 |
113.4 |
109.4 |
C1 |
O1 |
HO1 |
110.2 |
106.8 |
O5 |
C1 |
H1 |
110.4 |
109.4 |
C1 |
O5 |
C5 |
122.6 |
107.6 |
C3 |
C2 |
O2 |
103.8 |
109.6 |
C3 |
C2 |
H2 |
110.5 |
109.6 |
C2 |
C3 |
C4 |
109.3 |
108.5 |
C2 |
C3 |
O3 |
114.3 |
109.6 |
C2 |
C3 |
H3 |
105.9 |
109.6 |
O2 |
C2 |
H2 |
115.3 |
109.5 |
C2 |
O2 |
HO2 |
108.0 |
106.8 |
C4 |
C3 |
O3 |
108.2 |
109.8 |
C4 |
C3 |
H3 |
112.3 |
109.7 |
C3 |
C4 |
C5 |
110.8 |
109.1 |
C3 |
C4 |
O4 |
113.0 |
109.6 |
C3 |
C4 |
H4 |
106.6 |
109.5 |
O3 |
C3 |
H3 |
106.9 |
109.6 |
C3 |
O3 |
HO3 |
114.3 |
106.8 |
C5 |
C4 |
O4 |
110.8 |
109.6 |
C5 |
C4 |
H4 |
108.9 |
109.5 |
C4 |
C5 |
O5 |
107.3 |
109.8 |
C4 |
C5 |
H51 |
113.0 |
109.4 |
C4 |
C5 |
H52 |
113.0 |
109.4 |
O4 |
C4 |
H4 |
106.6 |
109.5 |
C4 |
O4 |
HO4 |
113.0 |
106.8 |
O5 |
C5 |
H51 |
113.1 |
109.5 |
O5 |
C5 |
H52 |
113.1 |
109.4 |
H51 |
C5 |
H52 |
97.4 |
109.3 |
Torsion Angles for ARB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
243.0 |
239.9 |
O1 |
C1 |
C2 |
H1 |
122.5 |
119.8 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.3 |
O5 |
C1 |
C2 |
H1 |
239.5 |
239.9 |
C2 |
C1 |
O5 |
C5 |
317.4 |
292.4 |
C3 |
C2 |
C1 |
O2 |
245.9 |
240.0 |
C3 |
C2 |
C1 |
H2 |
121.5 |
120.0 |
C1 |
C2 |
C3 |
C4 |
303.2 |
306.3 |
C1 |
C2 |
C3 |
O3 |
181.8 |
186.4 |
C1 |
C2 |
C3 |
H3 |
64.3 |
66.0 |
O2 |
C2 |
C1 |
H2 |
235.6 |
239.9 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
60.0 |
C2 |
C1 |
O1 |
O5 |
122.1 |
120.3 |
C2 |
C1 |
O1 |
H1 |
242.6 |
240.1 |
O1 |
C1 |
C2 |
C3 |
289.5 |
301.2 |
O1 |
C1 |
C2 |
O2 |
43.5 |
61.1 |
O1 |
C1 |
C2 |
H2 |
168.0 |
181.2 |
O5 |
C1 |
O1 |
H1 |
120.5 |
119.8 |
O1 |
C1 |
O5 |
C5 |
77.5 |
52.5 |
C2 |
C1 |
O5 |
O1 |
239.9 |
239.9 |
C2 |
C1 |
O5 |
H1 |
117.5 |
120.1 |
O5 |
C1 |
C2 |
C3 |
46.5 |
61.3 |
O5 |
C1 |
C2 |
O2 |
160.6 |
181.2 |
O5 |
C1 |
C2 |
H2 |
285.0 |
301.3 |
O1 |
C1 |
O5 |
H1 |
237.6 |
240.2 |
O5 |
C1 |
O1 |
HO1 |
57.9 |
60.0 |
C4 |
C5 |
O5 |
C1 |
44.6 |
67.6 |
C1 |
O5 |
C5 |
H51 |
279.3 |
307.5 |
C1 |
O5 |
C5 |
H52 |
169.8 |
187.7 |
C2 |
C1 |
H1 |
O1 |
120.4 |
119.8 |
C2 |
C1 |
H1 |
O5 |
237.7 |
239.7 |
H1 |
C1 |
C2 |
C3 |
167.0 |
181.4 |
H1 |
C1 |
C2 |
O2 |
281.1 |
301.3 |
H1 |
C1 |
C2 |
H2 |
45.5 |
61.4 |
O1 |
C1 |
H1 |
O5 |
117.3 |
119.9 |
H1 |
C1 |
O1 |
HO1 |
297.4 |
300.1 |
H1 |
C1 |
O5 |
C5 |
200.0 |
172.3 |
C3 |
C2 |
C1 |
O1 |
289.5 |
301.2 |
C3 |
C2 |
C1 |
O5 |
46.5 |
61.3 |
C3 |
C2 |
C1 |
H1 |
167.0 |
181.4 |
C1 |
C2 |
C3 |
O2 |
116.6 |
119.9 |
C1 |
C2 |
C3 |
H2 |
240.8 |
240.1 |
O2 |
C2 |
C3 |
H2 |
124.1 |
120.2 |
C3 |
C2 |
O2 |
HO2 |
300.1 |
179.7 |
C4 |
C3 |
C2 |
O3 |
121.4 |
120.0 |
C4 |
C3 |
C2 |
H3 |
238.9 |
240.3 |
C2 |
C3 |
C4 |
C5 |
60.2 |
53.7 |
C2 |
C3 |
C4 |
O4 |
295.2 |
293.7 |
C2 |
C3 |
C4 |
H4 |
178.5 |
173.6 |
O3 |
C3 |
C2 |
H3 |
117.5 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
180.1 |
O2 |
C2 |
C1 |
O1 |
43.5 |
61.1 |
O2 |
C2 |
C1 |
O5 |
160.6 |
181.2 |
O2 |
C2 |
C1 |
H1 |
281.1 |
301.3 |
C1 |
C2 |
O2 |
C3 |
240.0 |
240.4 |
C1 |
C2 |
O2 |
H2 |
119.0 |
120.1 |
C3 |
C2 |
O2 |
H2 |
239.0 |
239.7 |
O2 |
C2 |
C3 |
C4 |
186.6 |
186.4 |
O2 |
C2 |
C3 |
O3 |
65.1 |
66.4 |
O2 |
C2 |
C3 |
H3 |
307.7 |
306.1 |
H2 |
C2 |
C1 |
O1 |
168.0 |
181.2 |
H2 |
C2 |
C1 |
O5 |
285.0 |
301.3 |
H2 |
C2 |
C1 |
H1 |
45.5 |
61.4 |
C1 |
C2 |
H2 |
C3 |
123.0 |
119.6 |
C1 |
C2 |
H2 |
O2 |
240.2 |
239.9 |
C3 |
C2 |
H2 |
O2 |
117.2 |
120.2 |
H2 |
C2 |
C3 |
C4 |
62.4 |
66.2 |
H2 |
C2 |
C3 |
O3 |
301.0 |
306.3 |
H2 |
C2 |
C3 |
H3 |
183.5 |
186.0 |
H2 |
C2 |
O2 |
HO2 |
61.1 |
299.9 |
C4 |
C3 |
C2 |
O2 |
186.6 |
186.4 |
C4 |
C3 |
C2 |
H2 |
62.4 |
66.2 |
C2 |
C3 |
C4 |
O3 |
234.9 |
240.2 |
C2 |
C3 |
C4 |
H3 |
117.1 |
119.7 |
O3 |
C3 |
C4 |
H3 |
242.2 |
239.5 |
C4 |
C3 |
O3 |
HO3 |
58.0 |
60.9 |
C5 |
C4 |
C3 |
O4 |
125.0 |
120.0 |
C5 |
C4 |
C3 |
H4 |
241.7 |
240.1 |
C3 |
C4 |
C5 |
O5 |
308.8 |
298.7 |
C3 |
C4 |
C5 |
H51 |
74.1 |
58.8 |
C3 |
C4 |
C5 |
H52 |
183.5 |
178.6 |
O4 |
C4 |
C3 |
H4 |
116.7 |
120.2 |
C3 |
C4 |
O4 |
HO4 |
180.1 |
179.8 |
O3 |
C3 |
C2 |
O2 |
65.1 |
66.4 |
O3 |
C3 |
C2 |
H2 |
301.0 |
306.3 |
C2 |
C3 |
O3 |
C4 |
122.0 |
119.2 |
C2 |
C3 |
O3 |
H3 |
243.1 |
239.7 |
C4 |
C3 |
O3 |
H3 |
121.1 |
120.5 |
O3 |
C3 |
C4 |
C5 |
185.2 |
173.5 |
O3 |
C3 |
C4 |
O4 |
60.3 |
53.6 |
O3 |
C3 |
C4 |
H4 |
303.6 |
293.4 |
H3 |
C3 |
C2 |
O2 |
307.7 |
306.1 |
H3 |
C3 |
C2 |
H2 |
183.5 |
186.0 |
C2 |
C3 |
H3 |
C4 |
240.9 |
241.0 |
C2 |
C3 |
H3 |
O3 |
122.3 |
120.3 |
C4 |
C3 |
H3 |
O3 |
241.5 |
239.4 |
H3 |
C3 |
C4 |
C5 |
303.0 |
294.0 |
H3 |
C3 |
C4 |
O4 |
178.0 |
174.1 |
H3 |
C3 |
C4 |
H4 |
61.4 |
53.9 |
H3 |
C3 |
O3 |
HO3 |
296.9 |
300.4 |
C1 |
O5 |
C5 |
C4 |
44.6 |
67.6 |
C5 |
C4 |
C3 |
O3 |
185.2 |
173.5 |
C5 |
C4 |
C3 |
H3 |
303.0 |
294.0 |
C3 |
C4 |
C5 |
O4 |
233.8 |
240.0 |
C3 |
C4 |
C5 |
H4 |
116.9 |
119.9 |
O4 |
C4 |
C5 |
H4 |
243.1 |
239.8 |
C5 |
C4 |
O4 |
HO4 |
55.1 |
60.2 |
O5 |
C5 |
C4 |
H51 |
234.7 |
239.8 |
O5 |
C5 |
C4 |
H52 |
125.3 |
120.1 |
H51 |
C5 |
C4 |
H52 |
250.6 |
240.2 |
O4 |
C4 |
C3 |
O3 |
60.3 |
53.6 |
O4 |
C4 |
C3 |
H3 |
178.0 |
174.1 |
C3 |
C4 |
O4 |
C5 |
125.0 |
119.7 |
C3 |
C4 |
O4 |
H4 |
243.3 |
239.8 |
C5 |
C4 |
O4 |
H4 |
118.4 |
120.2 |
O4 |
C4 |
C5 |
O5 |
75.0 |
58.6 |
O4 |
C4 |
C5 |
H51 |
200.3 |
178.8 |
O4 |
C4 |
C5 |
H52 |
309.7 |
298.6 |
H4 |
C4 |
C3 |
O3 |
303.6 |
293.4 |
H4 |
C4 |
C3 |
H3 |
61.4 |
53.9 |
C3 |
C4 |
H4 |
C5 |
240.5 |
240.4 |
C3 |
C4 |
H4 |
O4 |
120.9 |
120.2 |
C5 |
C4 |
H4 |
O4 |
240.4 |
239.8 |
H4 |
C4 |
C5 |
O5 |
191.9 |
178.8 |
H4 |
C4 |
C5 |
H51 |
317.3 |
298.9 |
H4 |
C4 |
C5 |
H52 |
66.6 |
58.7 |
H4 |
C4 |
O4 |
HO4 |
296.7 |
300.0 |
C5 |
O5 |
C1 |
H1 |
200.0 |
172.3 |
O5 |
C5 |
C4 |
O4 |
75.0 |
58.6 |
O5 |
C5 |
C4 |
H4 |
191.9 |
178.8 |
C4 |
C5 |
O5 |
H51 |
125.3 |
120.1 |
C4 |
C5 |
O5 |
H52 |
234.7 |
239.9 |
H51 |
C5 |
O5 |
H52 |
109.5 |
119.8 |
H51 |
C5 |
C4 |
O4 |
200.3 |
178.8 |
H51 |
C5 |
C4 |
H4 |
317.3 |
298.9 |
C4 |
C5 |
H51 |
O5 |
237.9 |
239.6 |
C4 |
C5 |
H51 |
H52 |
118.9 |
119.8 |
O5 |
C5 |
H51 |
H52 |
241.0 |
240.2 |
H52 |
C5 |
C4 |
O4 |
309.7 |
298.6 |
H52 |
C5 |
C4 |
H4 |
66.6 |
58.7 |
C4 |
C5 |
H52 |
O5 |
122.1 |
120.3 |
C4 |
C5 |
H52 |
H51 |
241.1 |
240.2 |
O5 |
C5 |
H52 |
H51 |
119.0 |
119.9 |
HO1 |
O1 |
C1 |
O5 |
57.9 |
60.0 |
HO1 |
O1 |
C1 |
H1 |
297.4 |
300.1 |
HO2 |
O2 |
C2 |
H2 |
61.1 |
299.9 |
HO3 |
O3 |
C3 |
H3 |
296.9 |
300.4 |
HO4 |
O4 |
C4 |
H4 |
296.7 |
300.0 |