PDB Chemical Component APO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for APO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N2	1.475	1.469
C1	C3	1.572	1.506
C1	C6	1.580	1.528
C1	HC1	1.115	1.090
N2	HN21	1.020	1.008
N2	HN22	1.020	1.009
C3	O4	1.224	1.208
C3	O5	1.378	1.343
O5	HO5	0.950	0.968
C6	P7	1.787	1.822
C6	HC61	1.114	1.090
C6	HC62	1.115	1.090
P7	O8	1.611	1.610
P7	O9	1.625	1.609
P7	O10	1.614	1.479
O8	HO8	0.950	0.967
O9	HO9	0.950	0.966

Bond Angles for APO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N2	C1	C3	112.7	109.4
N2	C1	C6	106.5	109.5
N2	C1	HC1	111.9	109.4
C1	N2	HN21	111.0	106.7
C1	N2	HN22	112.7	106.7
C3	C1	C6	116.0	109.5
C3	C1	HC1	101.5	109.5
C1	C3	O4	121.9	120.1
C1	C3	O5	114.9	120.0
C6	C1	HC1	108.2	109.5
C1	C6	P7	113.6	109.4
C1	C6	HC61	110.7	109.5
C1	C6	HC62	110.7	109.5
HN21	N2	HN22	111.1	106.7
O4	C3	O5	123.3	119.9
C3	O5	HO5	114.9	120.0
P7	C6	HC61	110.7	109.5
P7	C6	HC62	110.7	109.5
C6	P7	O8	105.5	109.4
C6	P7	O9	111.0	109.5
C6	P7	O10	113.2	109.5
HC61	C6	HC62	99.6	109.5
O8	P7	O9	108.8	109.4
O8	P7	O10	105.1	109.4
P7	O8	HO8	105.5	106.8
O9	P7	O10	112.7	109.5
P7	O9	HO9	111.0	106.8

Torsion Angles for APO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C1	N2	C6	231.7	240.0
C3	C1	N2	HC1	113.6	119.9
N2	C1	C3	O4	160.2	30.1
N2	C1	C3	O5	339.0	209.9
C6	C1	N2	HC1	241.9	240.0
N2	C1	C6	P7	87.2	60.0
N2	C1	C6	HC61	322.0	180.0
N2	C1	C6	HC62	212.5	300.0
HN21	N2	C1	HN22	234.7	246.2
N2	C1	C3	C6	123.2	120.0
N2	C1	C3	HC1	240.2	240.1
C3	C1	N2	HN21	54.7	299.9
C3	C1	N2	HN22	180.0	53.8
C6	C1	C3	HC1	117.0	120.1
C3	C1	C6	P7	213.6	179.9
C3	C1	C6	HC61	88.3	299.9
C3	C1	C6	HC62	338.8	60.0
O4	C3	C1	O5	181.1	180.1
C1	C3	O5	HO5	180.0	180.0
N2	C1	C6	C3	233.7	240.1
N2	C1	C6	HC1	120.5	120.0
C6	C1	N2	HN21	183.0	60.0
C6	C1	N2	HN22	308.3	173.8
C3	C1	C6	HC1	246.8	239.9
C6	C1	C3	O4	37.0	270.1
C6	C1	C3	O5	215.9	89.9
P7	C6	C1	HC61	125.3	240.0
P7	C6	C1	HC62	234.7	120.0
C1	C6	P7	O8	293.1	180.0
C1	C6	P7	O9	50.8	299.9
C1	C6	P7	O10	178.7	60.0
HC61	C6	C1	HC62	109.5	240.0
N2	C1	HC1	C3	120.4	119.9
N2	C1	HC1	C6	242.9	240.0
HC1	C1	N2	HN21	301.1	180.0
HC1	C1	N2	HN22	66.4	293.8
C3	C1	HC1	C6	122.6	120.1
HC1	C1	C3	O4	280.0	150.0
HC1	C1	C3	O5	98.8	329.9
HC1	C1	C6	P7	326.8	300.0
HC1	C1	C6	HC61	201.5	60.0
HC1	C1	C6	HC62	92.0	180.0
HN21	N2	C1	C3	54.7	299.9
HN21	N2	C1	C6	183.0	60.0
HN21	N2	C1	HC1	301.1	180.0
C1	N2	HN21	HN22	126.2	113.9
HN22	N2	C1	C3	180.0	53.8
HN22	N2	C1	C6	308.3	173.8
HN22	N2	C1	HC1	66.4	293.8
C1	N2	HN22	HN21	234.7	246.2
O4	C3	C1	C6	37.0	270.1
O4	C3	C1	HC1	280.0	150.0
C1	C3	O4	O5	178.8	179.9
O4	C3	O5	HO5	358.8	359.9
O5	C3	C1	C6	215.9	89.9
O5	C3	C1	HC1	98.8	329.9
C1	C3	O5	O4	181.2	180.1
P7	C6	C1	HC1	326.8	300.0
C1	C6	P7	HC61	234.7	120.0
C1	C6	P7	HC62	125.3	240.0
HC61	C6	P7	HC62	250.5	120.0
O8	P7	C6	O9	242.4	240.0
O8	P7	C6	O10	114.4	119.9
C6	P7	O8	HO8	180.0	180.0
O9	P7	C6	O10	232.1	239.9
C6	P7	O9	HO9	180.0	300.1
HC61	C6	C1	HC1	201.5	60.0
C1	C6	HC61	P7	126.9	240.0
C1	C6	HC61	HC62	243.5	120.0
P7	C6	HC61	HC62	116.6	240.0
HC61	C6	P7	O8	58.4	60.0
HC61	C6	P7	O9	176.0	180.0
HC61	C6	P7	O10	303.9	300.1
HC62	C6	C1	HC1	92.0	180.0
C1	C6	HC62	P7	233.1	120.0
C1	C6	HC62	HC61	116.5	240.0
P7	C6	HC62	HC61	243.4	120.0
HC62	C6	P7	O8	167.9	300.0
HC62	C6	P7	O9	285.5	59.9
HC62	C6	P7	O10	53.4	180.0
O8	P7	C6	HC61	58.4	60.0
O8	P7	C6	HC62	167.9	300.0
C6	P7	O8	O9	119.1	120.0
C6	P7	O8	O10	240.1	240.0
O9	P7	O8	O10	121.0	120.0
O8	P7	O9	HO9	295.6	60.0
O9	P7	C6	HC61	176.0	180.0
O9	P7	C6	HC62	285.5	59.9
C6	P7	O9	O8	244.4	240.0
C6	P7	O9	O10	128.2	120.1
O8	P7	O9	O10	243.8	240.0
O9	P7	O8	HO8	60.9	60.0
O10	P7	C6	HC61	303.9	300.1
O10	P7	C6	HC62	53.4	180.0
C6	P7	O10	O8	114.6	119.9
C6	P7	O10	O9	233.0	239.9
O8	P7	O10	O9	118.4	120.0
O10	P7	O8	HO8	299.9	300.0
O10	P7	O9	HO9	51.8	180.0
HO8	O8	P7	O9	60.9	60.0
HO8	O8	P7	O10	299.9	300.0
HO9	O9	P7	O10	51.8	180.0