PDB Chemical Component AOR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AOR
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CA |
C |
1.532 |
1.507 |
CA |
CB |
1.533 |
1.530 |
CA |
N1 |
1.469 |
1.465 |
CA |
HA |
1.100 |
1.089 |
C |
O |
1.255 |
1.209 |
C |
OXT |
1.249 |
1.342 |
OXT |
HXT |
0.950 |
0.967 |
CB |
CG |
1.525 |
1.531 |
CB |
HB1 |
1.100 |
1.090 |
CB |
HB2 |
1.100 |
1.089 |
CG |
CD |
1.529 |
1.530 |
CG |
HG1 |
1.100 |
1.090 |
CG |
HG2 |
1.101 |
1.089 |
CD |
NE |
1.496 |
1.469 |
CD |
HD1 |
1.100 |
1.090 |
CD |
HD2 |
1.100 |
1.090 |
NE |
HNE1 |
1.000 |
1.008 |
NE |
HNE2 |
1.000 |
1.009 |
N1 |
C1 |
1.332 |
1.347 |
N1 |
HN1 |
1.000 |
0.970 |
C1 |
O1 |
1.232 |
1.213 |
C1 |
C2 |
1.526 |
1.507 |
C2 |
H21 |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.090 |
C2 |
H23 |
1.100 |
1.090 |
Bond Angles for AOR
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C |
CA |
CB |
111.0 |
109.4 |
C |
CA |
N1 |
111.1 |
109.5 |
C |
CA |
HA |
108.8 |
109.5 |
CA |
C |
O |
118.9 |
120.0 |
CA |
C |
OXT |
117.6 |
120.0 |
CB |
CA |
N1 |
113.5 |
109.5 |
CB |
CA |
HA |
106.2 |
109.5 |
CA |
CB |
CG |
114.8 |
109.4 |
CA |
CB |
HB1 |
106.5 |
109.5 |
CA |
CB |
HB2 |
107.7 |
109.5 |
N1 |
CA |
HA |
106.0 |
109.5 |
CA |
N1 |
C1 |
121.8 |
120.0 |
CA |
N1 |
HN1 |
119.1 |
120.0 |
O |
C |
OXT |
123.5 |
120.0 |
C |
OXT |
HXT |
109.5 |
120.0 |
CG |
CB |
HB1 |
106.5 |
109.4 |
CG |
CB |
HB2 |
107.7 |
109.4 |
CB |
CG |
CD |
110.9 |
109.4 |
CB |
CG |
HG1 |
108.7 |
109.4 |
CB |
CG |
HG2 |
109.0 |
109.4 |
HB1 |
CB |
HB2 |
113.8 |
109.5 |
CD |
CG |
HG1 |
108.7 |
109.5 |
CD |
CG |
HG2 |
109.0 |
109.5 |
CG |
CD |
NE |
112.1 |
109.4 |
CG |
CD |
HD1 |
108.0 |
109.5 |
CG |
CD |
HD2 |
108.6 |
109.5 |
HG1 |
CG |
HG2 |
110.7 |
109.5 |
NE |
CD |
HD1 |
108.0 |
109.4 |
NE |
CD |
HD2 |
108.6 |
109.5 |
CD |
NE |
HNE1 |
109.5 |
106.7 |
CD |
NE |
HNE2 |
109.5 |
106.7 |
HD1 |
CD |
HD2 |
111.5 |
109.5 |
HNE1 |
NE |
HNE2 |
109.5 |
106.8 |
C1 |
N1 |
HN1 |
119.1 |
120.0 |
N1 |
C1 |
O1 |
122.0 |
120.0 |
N1 |
C1 |
C2 |
114.3 |
120.0 |
O1 |
C1 |
C2 |
123.7 |
120.0 |
C1 |
C2 |
H21 |
109.5 |
109.5 |
C1 |
C2 |
H22 |
109.4 |
109.5 |
C1 |
C2 |
H23 |
109.5 |
109.5 |
H21 |
C2 |
H22 |
109.5 |
109.5 |
H21 |
C2 |
H23 |
109.5 |
109.5 |
H22 |
C2 |
H23 |
109.4 |
109.5 |
Torsion Angles for AOR
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CB |
CA |
C |
N1 |
127.2 |
120.0 |
CB |
CA |
C |
HA |
243.6 |
240.0 |
C |
CA |
CB |
CG |
302.4 |
175.0 |
C |
CA |
CB |
HB1 |
184.8 |
295.0 |
C |
CA |
CB |
HB2 |
62.4 |
55.0 |
N1 |
CA |
C |
HA |
116.3 |
120.0 |
C |
CA |
N1 |
C1 |
264.2 |
275.0 |
C |
CA |
N1 |
HN1 |
84.2 |
95.0 |
O |
C |
CA |
OXT |
179.7 |
180.0 |
CA |
C |
OXT |
HXT |
179.7 |
180.0 |
C |
CA |
CB |
N1 |
234.1 |
240.0 |
C |
CA |
CB |
HA |
118.0 |
120.0 |
CB |
CA |
C |
O |
324.0 |
120.0 |
CB |
CA |
C |
OXT |
144.3 |
300.0 |
N1 |
CA |
CB |
HA |
244.0 |
240.0 |
CB |
CA |
N1 |
C1 |
138.4 |
155.1 |
CB |
CA |
N1 |
HN1 |
318.3 |
335.0 |
CG |
CB |
CA |
HB1 |
117.6 |
240.0 |
CG |
CB |
CA |
HB2 |
240.0 |
120.0 |
CA |
CB |
CG |
CD |
174.1 |
180.0 |
CA |
CB |
CG |
HG1 |
54.7 |
300.0 |
CA |
CB |
CG |
HG2 |
294.1 |
60.0 |
HB1 |
CB |
CA |
HB2 |
122.4 |
239.9 |
C |
CA |
N1 |
CB |
125.9 |
120.0 |
C |
CA |
N1 |
HA |
242.0 |
240.0 |
N1 |
CA |
C |
O |
196.8 |
360.0 |
N1 |
CA |
C |
OXT |
17.1 |
180.0 |
CB |
CA |
N1 |
HA |
116.1 |
120.0 |
N1 |
CA |
CB |
CG |
68.3 |
295.0 |
N1 |
CA |
CB |
HB1 |
310.7 |
55.0 |
N1 |
CA |
CB |
HB2 |
188.3 |
175.0 |
C1 |
N1 |
CA |
HN1 |
180.0 |
180.1 |
CA |
N1 |
C1 |
O1 |
9.5 |
360.0 |
CA |
N1 |
C1 |
C2 |
189.6 |
180.0 |
C |
CA |
HA |
CB |
240.5 |
240.0 |
C |
CA |
HA |
N1 |
119.6 |
120.0 |
HA |
CA |
C |
O |
80.4 |
240.0 |
HA |
CA |
C |
OXT |
260.7 |
60.0 |
CB |
CA |
HA |
N1 |
239.0 |
240.0 |
HA |
CA |
CB |
CG |
184.4 |
55.0 |
HA |
CA |
CB |
HB1 |
66.8 |
175.0 |
HA |
CA |
CB |
HB2 |
304.3 |
295.0 |
HA |
CA |
N1 |
C1 |
22.2 |
35.0 |
HA |
CA |
N1 |
HN1 |
202.2 |
215.0 |
O |
C |
CA |
CB |
324.0 |
120.0 |
O |
C |
CA |
N1 |
196.8 |
360.0 |
O |
C |
CA |
HA |
80.4 |
240.0 |
CA |
C |
O |
OXT |
180.3 |
180.0 |
O |
C |
OXT |
HXT |
0.0 |
0.0 |
OXT |
C |
CA |
CB |
144.3 |
300.0 |
OXT |
C |
CA |
N1 |
17.1 |
180.0 |
OXT |
C |
CA |
HA |
260.7 |
60.0 |
CA |
C |
OXT |
O |
179.7 |
180.0 |
CG |
CB |
CA |
N1 |
68.3 |
295.0 |
CG |
CB |
CA |
HA |
184.4 |
55.0 |
CA |
CB |
CG |
HB1 |
242.4 |
120.0 |
CA |
CB |
CG |
HB2 |
120.0 |
240.0 |
HB1 |
CB |
CG |
HB2 |
237.6 |
120.0 |
CD |
CG |
CB |
HG1 |
119.4 |
240.0 |
CD |
CG |
CB |
HG2 |
240.0 |
120.0 |
CB |
CG |
CD |
NE |
69.4 |
180.0 |
CB |
CG |
CD |
HD1 |
310.5 |
300.0 |
CB |
CG |
CD |
HD2 |
189.4 |
60.0 |
HG1 |
CG |
CB |
HG2 |
120.6 |
240.0 |
HB1 |
CB |
CA |
N1 |
310.7 |
55.0 |
HB1 |
CB |
CA |
HA |
66.8 |
175.0 |
CA |
CB |
HB1 |
CG |
123.0 |
240.0 |
CA |
CB |
HB1 |
HB2 |
241.5 |
120.1 |
CG |
CB |
HB1 |
HB2 |
118.5 |
240.0 |
HB1 |
CB |
CG |
CD |
291.7 |
60.0 |
HB1 |
CB |
CG |
HG1 |
172.3 |
180.0 |
HB1 |
CB |
CG |
HG2 |
51.7 |
300.0 |
HB2 |
CB |
CA |
N1 |
188.3 |
175.0 |
HB2 |
CB |
CA |
HA |
304.3 |
295.0 |
CA |
CB |
HB2 |
CG |
235.6 |
120.0 |
CA |
CB |
HB2 |
HB1 |
117.8 |
239.9 |
CG |
CB |
HB2 |
HB1 |
242.2 |
120.0 |
HB2 |
CB |
CG |
CD |
54.1 |
300.0 |
HB2 |
CB |
CG |
HG1 |
294.7 |
60.0 |
HB2 |
CB |
CG |
HG2 |
174.1 |
180.0 |
CD |
CG |
CB |
HB1 |
291.7 |
60.0 |
CD |
CG |
CB |
HB2 |
54.1 |
300.0 |
CB |
CG |
CD |
HG1 |
240.6 |
120.0 |
CB |
CG |
CD |
HG2 |
120.0 |
240.0 |
HG1 |
CG |
CD |
HG2 |
239.4 |
120.1 |
NE |
CD |
CG |
HD1 |
118.9 |
240.0 |
NE |
CD |
CG |
HD2 |
240.0 |
120.0 |
CG |
CD |
NE |
HNE1 |
69.4 |
66.2 |
CG |
CD |
NE |
HNE2 |
309.4 |
180.0 |
HD1 |
CD |
CG |
HD2 |
121.1 |
240.0 |
HG1 |
CG |
CB |
HB1 |
172.3 |
180.0 |
HG1 |
CG |
CB |
HB2 |
294.7 |
60.0 |
CB |
CG |
HG1 |
CD |
120.8 |
240.0 |
CB |
CG |
HG1 |
HG2 |
240.4 |
120.0 |
CD |
CG |
HG1 |
HG2 |
119.6 |
239.9 |
HG1 |
CG |
CD |
NE |
188.8 |
60.0 |
HG1 |
CG |
CD |
HD1 |
69.9 |
180.0 |
HG1 |
CG |
CD |
HD2 |
308.8 |
300.0 |
HG2 |
CG |
CB |
HB1 |
51.7 |
300.0 |
HG2 |
CG |
CB |
HB2 |
174.1 |
180.0 |
CB |
CG |
HG2 |
CD |
238.8 |
120.0 |
CB |
CG |
HG2 |
HG1 |
119.4 |
240.0 |
CD |
CG |
HG2 |
HG1 |
240.6 |
120.1 |
HG2 |
CG |
CD |
NE |
309.4 |
300.0 |
HG2 |
CG |
CD |
HD1 |
190.5 |
59.9 |
HG2 |
CG |
CD |
HD2 |
69.4 |
180.0 |
NE |
CD |
CG |
HG1 |
188.8 |
60.0 |
NE |
CD |
CG |
HG2 |
309.4 |
300.0 |
CG |
CD |
NE |
HD1 |
241.1 |
120.0 |
CG |
CD |
NE |
HD2 |
120.0 |
240.0 |
HD1 |
CD |
NE |
HD2 |
238.9 |
120.0 |
HNE1 |
NE |
CD |
HNE2 |
120.0 |
246.1 |
HD1 |
CD |
CG |
HG1 |
69.9 |
180.0 |
HD1 |
CD |
CG |
HG2 |
190.5 |
59.9 |
CG |
CD |
HD1 |
NE |
121.4 |
240.0 |
CG |
CD |
HD1 |
HD2 |
240.7 |
120.1 |
NE |
CD |
HD1 |
HD2 |
119.3 |
240.0 |
HD1 |
CD |
NE |
HNE1 |
188.3 |
306.2 |
HD1 |
CD |
NE |
HNE2 |
68.3 |
60.0 |
HD2 |
CD |
CG |
HG1 |
308.8 |
300.0 |
HD2 |
CD |
CG |
HG2 |
69.4 |
180.0 |
CG |
CD |
HD2 |
NE |
237.9 |
120.0 |
CG |
CD |
HD2 |
HD1 |
118.9 |
239.9 |
NE |
CD |
HD2 |
HD1 |
241.1 |
120.0 |
HD2 |
CD |
NE |
HNE1 |
309.4 |
186.2 |
HD2 |
CD |
NE |
HNE2 |
189.4 |
300.0 |
HNE1 |
NE |
CD |
HD1 |
188.3 |
306.2 |
HNE1 |
NE |
CD |
HD2 |
309.4 |
186.2 |
CD |
NE |
HNE1 |
HNE2 |
239.9 |
113.8 |
HNE2 |
NE |
CD |
HD1 |
68.3 |
60.0 |
HNE2 |
NE |
CD |
HD2 |
189.4 |
300.0 |
CD |
NE |
HNE2 |
HNE1 |
120.0 |
246.2 |
C1 |
N1 |
CA |
HA |
22.2 |
35.0 |
CA |
N1 |
C1 |
HN1 |
180.0 |
179.9 |
O1 |
C1 |
N1 |
C2 |
179.9 |
180.0 |
N1 |
C1 |
C2 |
H21 |
120.0 |
269.9 |
N1 |
C1 |
C2 |
H22 |
360.0 |
29.9 |
N1 |
C1 |
C2 |
H23 |
240.0 |
149.9 |
HN1 |
N1 |
CA |
HA |
202.2 |
215.0 |
CA |
N1 |
HN1 |
C1 |
180.0 |
180.1 |
HN1 |
N1 |
C1 |
O1 |
189.5 |
180.0 |
HN1 |
N1 |
C1 |
C2 |
9.6 |
0.1 |
O1 |
C1 |
N1 |
HN1 |
189.5 |
180.0 |
N1 |
C1 |
O1 |
C2 |
180.1 |
180.0 |
O1 |
C1 |
C2 |
H21 |
300.1 |
90.0 |
O1 |
C1 |
C2 |
H22 |
180.1 |
210.0 |
O1 |
C1 |
C2 |
H23 |
60.1 |
330.0 |
C2 |
C1 |
N1 |
HN1 |
9.6 |
0.1 |
N1 |
C1 |
C2 |
O1 |
179.9 |
180.0 |
H21 |
C2 |
C1 |
H22 |
120.0 |
240.0 |
H21 |
C2 |
C1 |
H23 |
240.0 |
120.0 |
H22 |
C2 |
C1 |
H23 |
120.0 |
240.0 |
C1 |
C2 |
H21 |
H22 |
240.0 |
120.0 |
C1 |
C2 |
H21 |
H23 |
120.1 |
240.0 |
H22 |
C2 |
H21 |
H23 |
240.0 |
120.0 |
C1 |
C2 |
H22 |
H21 |
120.0 |
240.0 |
C1 |
C2 |
H22 |
H23 |
240.0 |
120.0 |
H21 |
C2 |
H22 |
H23 |
120.0 |
240.0 |
C1 |
C2 |
H23 |
H21 |
240.0 |
120.0 |
C1 |
C2 |
H23 |
H22 |
120.0 |
240.0 |
H21 |
C2 |
H23 |
H22 |
240.0 |
120.0 |