PDB Chemical Component ALE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ALE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.402 |
1.383 |
C1 |
C6 |
1.408 |
1.382 |
C1 |
C7 |
1.420 |
1.507 |
C2 |
C3 |
1.391 |
1.386 |
C3 |
C4 |
1.396 |
1.392 |
C3 |
O1 |
1.350 |
1.360 |
C4 |
C5 |
1.399 |
1.385 |
C4 |
O2 |
1.358 |
1.360 |
C5 |
C6 |
1.399 |
1.382 |
O3 |
C7 |
1.438 |
1.430 |
C9 |
N1 |
1.459 |
1.470 |
N1 |
C8 |
1.457 |
1.469 |
C8 |
C7 |
1.542 |
1.530 |
C2 |
H2 |
1.080 |
1.081 |
C6 |
H6 |
1.080 |
1.080 |
C7 |
H7 |
1.100 |
1.090 |
O1 |
H1 |
0.951 |
0.968 |
C5 |
H5 |
1.080 |
1.080 |
O2 |
HA |
0.950 |
0.967 |
O3 |
H3 |
0.950 |
0.967 |
C9 |
H91C |
1.100 |
1.090 |
C9 |
H92C |
1.100 |
1.090 |
C9 |
H93C |
1.100 |
1.091 |
N1 |
HB |
1.000 |
1.009 |
C8 |
H81C |
1.100 |
1.090 |
C8 |
H82C |
1.100 |
1.090 |
Bond Angles for ALE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
118.8 |
120.1 |
C2 |
C1 |
C7 |
121.3 |
120.0 |
C1 |
C2 |
C3 |
120.9 |
120.0 |
C1 |
C2 |
H2 |
119.5 |
120.0 |
C6 |
C1 |
C7 |
119.9 |
119.9 |
C1 |
C6 |
C5 |
119.9 |
120.2 |
C1 |
C6 |
H6 |
120.1 |
119.9 |
C1 |
C7 |
O3 |
111.4 |
109.5 |
C1 |
C7 |
C8 |
111.3 |
109.5 |
C1 |
C7 |
H7 |
108.9 |
109.4 |
C2 |
C3 |
C4 |
120.3 |
119.8 |
C2 |
C3 |
O1 |
119.4 |
120.0 |
C3 |
C2 |
H2 |
119.6 |
120.0 |
C4 |
C3 |
O1 |
120.1 |
120.1 |
C3 |
C4 |
C5 |
119.2 |
119.9 |
C3 |
C4 |
O2 |
117.0 |
120.0 |
C3 |
O1 |
H1 |
109.5 |
114.0 |
C5 |
C4 |
O2 |
123.8 |
120.1 |
C4 |
C5 |
C6 |
120.8 |
120.0 |
C4 |
C5 |
H5 |
119.6 |
120.0 |
C4 |
O2 |
HA |
109.5 |
114.0 |
C5 |
C6 |
H6 |
120.0 |
119.9 |
C6 |
C5 |
H5 |
119.6 |
120.0 |
O3 |
C7 |
C8 |
109.3 |
109.5 |
O3 |
C7 |
H7 |
108.6 |
109.5 |
C7 |
O3 |
H3 |
109.5 |
114.0 |
C9 |
N1 |
C8 |
106.5 |
111.0 |
N1 |
C9 |
H91C |
109.5 |
109.5 |
N1 |
C9 |
H92C |
109.5 |
109.5 |
N1 |
C9 |
H93C |
109.5 |
109.5 |
C9 |
N1 |
HB |
110.2 |
110.9 |
N1 |
C8 |
C7 |
107.0 |
109.4 |
C8 |
N1 |
HB |
110.2 |
111.0 |
N1 |
C8 |
H81C |
110.1 |
109.5 |
N1 |
C8 |
H82C |
110.1 |
109.5 |
C8 |
C7 |
H7 |
107.3 |
109.5 |
C7 |
C8 |
H81C |
110.1 |
109.5 |
C7 |
C8 |
H82C |
110.1 |
109.5 |
H91C |
C9 |
H92C |
109.5 |
109.5 |
H91C |
C9 |
H93C |
109.5 |
109.4 |
H92C |
C9 |
H93C |
109.4 |
109.5 |
H81C |
C8 |
H82C |
109.5 |
109.5 |
Torsion Angles for ALE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C7 |
180.5 |
180.2 |
C2 |
C1 |
C6 |
C5 |
359.0 |
0.0 |
C2 |
C1 |
C6 |
H6 |
179.1 |
180.0 |
C2 |
C1 |
C7 |
O3 |
314.3 |
144.9 |
C2 |
C1 |
C7 |
C8 |
76.5 |
265.0 |
C2 |
C1 |
C7 |
H7 |
194.5 |
25.0 |
C1 |
C2 |
C3 |
C4 |
358.5 |
0.1 |
C1 |
C2 |
C3 |
O1 |
183.2 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C7 |
179.5 |
179.8 |
C6 |
C1 |
C2 |
C3 |
1.0 |
359.9 |
C6 |
C1 |
C2 |
H2 |
181.0 |
180.0 |
C6 |
C1 |
C7 |
O3 |
133.8 |
324.7 |
C6 |
C1 |
C7 |
C8 |
256.0 |
84.7 |
C6 |
C1 |
C7 |
H7 |
14.1 |
204.7 |
C4 |
C5 |
C6 |
C1 |
1.4 |
0.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
H5 |
181.4 |
180.0 |
C2 |
C1 |
C7 |
C6 |
180.5 |
180.2 |
C7 |
C1 |
C2 |
C3 |
180.6 |
179.7 |
C7 |
C1 |
C2 |
H2 |
0.6 |
359.7 |
C7 |
C1 |
C6 |
C5 |
179.5 |
180.3 |
C7 |
C1 |
C6 |
H6 |
359.5 |
0.2 |
O3 |
C7 |
C1 |
C8 |
237.8 |
240.0 |
O3 |
C7 |
C1 |
H7 |
119.7 |
120.0 |
C1 |
C7 |
O3 |
H3 |
180.0 |
60.0 |
N1 |
C8 |
C7 |
C1 |
171.2 |
180.0 |
C8 |
C7 |
C1 |
H7 |
241.9 |
240.0 |
C1 |
C7 |
C8 |
H81C |
51.6 |
60.0 |
C1 |
C7 |
C8 |
H82C |
290.8 |
300.0 |
C3 |
C2 |
C1 |
C6 |
1.0 |
359.9 |
C3 |
C2 |
C1 |
C7 |
180.6 |
179.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
O1 |
175.2 |
180.1 |
C2 |
C3 |
C4 |
C5 |
1.9 |
360.0 |
C2 |
C3 |
C4 |
O2 |
180.2 |
180.0 |
C2 |
C3 |
O1 |
H1 |
180.0 |
90.1 |
C2 |
C3 |
C4 |
O1 |
184.8 |
179.9 |
C4 |
C3 |
C2 |
H2 |
178.5 |
180.0 |
C4 |
C3 |
O1 |
H1 |
4.8 |
270.0 |
C5 |
C4 |
C3 |
O2 |
181.8 |
180.0 |
C3 |
C4 |
C5 |
C6 |
358.1 |
360.0 |
C3 |
C4 |
C5 |
H5 |
178.1 |
180.0 |
C3 |
C4 |
O2 |
HA |
180.0 |
90.0 |
C2 |
C3 |
O1 |
C4 |
175.2 |
180.1 |
O1 |
C3 |
C2 |
H2 |
3.2 |
360.0 |
O1 |
C3 |
C4 |
C5 |
177.1 |
180.0 |
O1 |
C3 |
C4 |
O2 |
355.3 |
0.0 |
C1 |
C6 |
C5 |
C4 |
1.4 |
0.0 |
C5 |
C4 |
C3 |
O1 |
177.1 |
180.0 |
C3 |
C4 |
C5 |
O2 |
178.1 |
180.0 |
C5 |
C4 |
O2 |
HA |
358.1 |
270.0 |
C4 |
C5 |
C6 |
H6 |
181.4 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
O2 |
C4 |
C3 |
O1 |
355.3 |
0.0 |
C3 |
C4 |
O2 |
C5 |
181.9 |
180.0 |
O2 |
C4 |
C5 |
C6 |
180.0 |
180.0 |
O2 |
C4 |
C5 |
H5 |
0.0 |
360.0 |
C5 |
C6 |
C1 |
C7 |
179.5 |
180.3 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
O2 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C1 |
C7 |
O3 |
C8 |
123.3 |
120.0 |
C1 |
C7 |
O3 |
H7 |
240.1 |
240.0 |
N1 |
C8 |
C7 |
O3 |
294.6 |
300.0 |
C8 |
C7 |
O3 |
H7 |
116.8 |
120.0 |
O3 |
C7 |
C8 |
H81C |
175.0 |
180.0 |
O3 |
C7 |
C8 |
H82C |
54.2 |
60.0 |
C9 |
N1 |
C8 |
C7 |
186.1 |
180.0 |
C8 |
N1 |
C9 |
HB |
240.5 |
236.0 |
C9 |
N1 |
C8 |
H81C |
305.7 |
300.0 |
C9 |
N1 |
C8 |
H82C |
66.5 |
60.0 |
H91C |
C9 |
N1 |
H92C |
240.0 |
239.9 |
H91C |
C9 |
N1 |
H93C |
120.0 |
119.9 |
H92C |
C9 |
N1 |
H93C |
240.1 |
240.0 |
C1 |
C7 |
C8 |
N1 |
171.2 |
180.0 |
O3 |
C7 |
C8 |
N1 |
294.6 |
300.0 |
C8 |
N1 |
C9 |
H91C |
180.0 |
60.0 |
C8 |
N1 |
C9 |
H92C |
300.0 |
180.0 |
C8 |
N1 |
C9 |
H93C |
60.0 |
300.0 |
C9 |
N1 |
C8 |
HB |
119.5 |
123.9 |
N1 |
C8 |
C7 |
H7 |
52.2 |
60.0 |
C7 |
C8 |
N1 |
H81C |
240.4 |
240.0 |
C7 |
C8 |
N1 |
H82C |
119.6 |
120.0 |
H81C |
C8 |
N1 |
H82C |
239.2 |
240.0 |
C1 |
C7 |
C8 |
O3 |
236.6 |
240.0 |
C1 |
C7 |
C8 |
H7 |
119.0 |
120.0 |
O3 |
C7 |
C8 |
H7 |
242.4 |
240.0 |
C8 |
C7 |
O3 |
H3 |
56.6 |
300.0 |
C7 |
C8 |
N1 |
HB |
66.6 |
56.1 |
N1 |
C8 |
C7 |
H81C |
119.6 |
120.0 |
N1 |
C8 |
C7 |
H82C |
240.4 |
240.0 |
H81C |
C8 |
C7 |
H82C |
120.8 |
120.0 |
H2 |
C2 |
C1 |
C6 |
181.0 |
180.0 |
H2 |
C2 |
C1 |
C7 |
0.6 |
359.7 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
178.5 |
180.0 |
H2 |
C2 |
C3 |
O1 |
3.2 |
360.0 |
H6 |
C6 |
C1 |
C7 |
359.5 |
0.2 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
1.4 |
0.0 |
C1 |
C7 |
H7 |
O3 |
121.5 |
120.0 |
C1 |
C7 |
H7 |
C8 |
239.5 |
240.0 |
O3 |
C7 |
H7 |
C8 |
118.0 |
120.0 |
H7 |
C7 |
O3 |
H3 |
299.9 |
180.0 |
H7 |
C7 |
C8 |
H81C |
292.6 |
300.0 |
H7 |
C7 |
C8 |
H82C |
171.8 |
180.0 |
H5 |
C5 |
C4 |
O2 |
0.0 |
360.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
1.4 |
0.0 |
H3 |
O3 |
C7 |
C8 |
56.6 |
300.0 |
H3 |
O3 |
C7 |
H7 |
299.9 |
180.0 |
H91C |
C9 |
N1 |
C8 |
180.0 |
60.0 |
N1 |
C9 |
H91C |
H92C |
120.0 |
120.1 |
N1 |
C9 |
H91C |
H93C |
240.0 |
240.0 |
H91C |
C9 |
N1 |
HB |
299.5 |
183.9 |
H92C |
C9 |
H91C |
H93C |
120.0 |
120.0 |
H92C |
C9 |
N1 |
C8 |
300.0 |
180.0 |
N1 |
C9 |
H92C |
H91C |
240.0 |
240.0 |
N1 |
C9 |
H92C |
H93C |
120.0 |
120.0 |
H92C |
C9 |
N1 |
HB |
59.5 |
304.0 |
H91C |
C9 |
H92C |
H93C |
240.0 |
240.0 |
H93C |
C9 |
N1 |
C8 |
60.0 |
300.0 |
N1 |
C9 |
H93C |
H91C |
120.0 |
120.0 |
N1 |
C9 |
H93C |
H92C |
240.0 |
240.0 |
H93C |
C9 |
N1 |
HB |
179.5 |
64.0 |
H91C |
C9 |
H93C |
H92C |
120.0 |
120.0 |
C9 |
N1 |
HB |
C8 |
242.8 |
236.1 |
HB |
N1 |
C9 |
H91C |
299.5 |
183.9 |
HB |
N1 |
C9 |
H92C |
59.5 |
304.0 |
HB |
N1 |
C9 |
H93C |
179.5 |
64.0 |
HB |
N1 |
C8 |
C7 |
66.6 |
56.1 |
HB |
N1 |
C8 |
H81C |
186.2 |
176.1 |
HB |
N1 |
C8 |
H82C |
307.0 |
296.1 |
N1 |
C8 |
H81C |
C7 |
242.3 |
240.0 |
H81C |
C8 |
N1 |
HB |
186.2 |
176.1 |
N1 |
C8 |
H81C |
H82C |
121.1 |
120.1 |
H81C |
C8 |
C7 |
H7 |
292.6 |
300.0 |
C7 |
C8 |
H81C |
H82C |
238.9 |
240.0 |
N1 |
C8 |
H82C |
C7 |
117.7 |
120.0 |
H82C |
C8 |
N1 |
HB |
307.0 |
296.1 |
N1 |
C8 |
H82C |
H81C |
238.9 |
240.0 |
H82C |
C8 |
C7 |
H7 |
171.8 |
180.0 |
C7 |
C8 |
H82C |
H81C |
121.1 |
120.0 |