PDB Chemical Component AG2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AG2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.493 |
1.469 |
| N |
HN1 |
1.019 |
1.008 |
| N |
HN2 |
1.020 |
1.008 |
| CA |
CB |
1.529 |
1.529 |
| CA |
HA1 |
1.115 |
1.090 |
| CA |
HA2 |
1.114 |
1.090 |
| CB |
CG |
1.522 |
1.530 |
| CB |
HB1 |
1.115 |
1.090 |
| CB |
HB2 |
1.116 |
1.090 |
| CG |
CD |
1.516 |
1.529 |
| CG |
HG1 |
1.115 |
1.089 |
| CG |
HG2 |
1.114 |
1.090 |
| CD |
NE |
1.460 |
1.464 |
| CD |
HD1 |
1.115 |
1.090 |
| CD |
HD2 |
1.115 |
1.089 |
| NE |
CZ |
1.329 |
1.374 |
| NE |
HE1 |
1.020 |
0.970 |
| CZ |
NH1 |
1.328 |
1.304 |
| CZ |
NH2 |
1.326 |
1.374 |
| NH1 |
HH11 |
1.020 |
0.970 |
| NH2 |
HH21 |
1.020 |
0.970 |
| NH2 |
HH22 |
1.020 |
0.970 |
Bond Angles for AG2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
HN1 |
110.5 |
106.8 |
| CA |
N |
HN2 |
111.9 |
106.7 |
| N |
CA |
CB |
110.5 |
109.6 |
| N |
CA |
HA1 |
111.9 |
109.4 |
| N |
CA |
HA2 |
111.9 |
109.4 |
| HN1 |
N |
HN2 |
111.8 |
106.7 |
| CB |
CA |
HA1 |
111.8 |
109.5 |
| CB |
CA |
HA2 |
111.8 |
109.5 |
| CA |
CB |
CG |
114.4 |
109.5 |
| CA |
CB |
HB1 |
110.4 |
109.5 |
| CA |
CB |
HB2 |
110.4 |
109.5 |
| HA1 |
CA |
HA2 |
98.6 |
109.4 |
| CG |
CB |
HB1 |
110.4 |
109.5 |
| CG |
CB |
HB2 |
110.4 |
109.4 |
| CB |
CG |
CD |
111.1 |
109.5 |
| CB |
CG |
HG1 |
111.6 |
109.5 |
| CB |
CG |
HG2 |
111.7 |
109.5 |
| HB1 |
CB |
HB2 |
99.8 |
109.4 |
| CD |
CG |
HG1 |
111.6 |
109.5 |
| CD |
CG |
HG2 |
111.6 |
109.4 |
| CG |
CD |
NE |
111.9 |
109.5 |
| CG |
CD |
HD1 |
111.3 |
109.4 |
| CG |
CD |
HD2 |
111.3 |
109.5 |
| HG1 |
CG |
HG2 |
98.8 |
109.5 |
| NE |
CD |
HD1 |
111.3 |
109.4 |
| NE |
CD |
HD2 |
111.3 |
109.5 |
| CD |
NE |
CZ |
124.5 |
120.1 |
| CD |
NE |
HE1 |
107.0 |
120.0 |
| HD1 |
CD |
HD2 |
99.1 |
109.5 |
| CZ |
NE |
HE1 |
106.9 |
119.9 |
| NE |
CZ |
NH1 |
120.2 |
120.0 |
| NE |
CZ |
NH2 |
119.9 |
120.1 |
| NH1 |
CZ |
NH2 |
119.9 |
120.0 |
| CZ |
NH1 |
HH11 |
20.8 |
120.0 |
| CZ |
NH2 |
HH21 |
119.9 |
120.0 |
| CZ |
NH2 |
HH22 |
108.5 |
120.0 |
| HH21 |
NH2 |
HH22 |
108.6 |
120.0 |
Torsion Angles for AG2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| HN1 |
N |
CA |
HN2 |
125.3 |
246.2 |
| CB |
CA |
N |
HA1 |
234.8 |
239.9 |
| CB |
CA |
N |
HA2 |
125.2 |
120.0 |
| N |
CA |
CB |
CG |
172.5 |
180.0 |
| N |
CA |
CB |
HB1 |
297.8 |
300.0 |
| N |
CA |
CB |
HB2 |
47.2 |
60.0 |
| HA1 |
CA |
N |
HA2 |
250.5 |
240.1 |
| CA |
N |
HN1 |
HN2 |
234.7 |
113.8 |
| HN1 |
N |
CA |
CB |
180.0 |
180.0 |
| HN1 |
N |
CA |
HA1 |
305.3 |
300.1 |
| HN1 |
N |
CA |
HA2 |
54.8 |
60.0 |
| CA |
N |
HN2 |
HN1 |
124.5 |
246.1 |
| HN2 |
N |
CA |
CB |
54.7 |
293.8 |
| HN2 |
N |
CA |
HA1 |
180.0 |
53.9 |
| HN2 |
N |
CA |
HA2 |
289.5 |
173.8 |
| CB |
CA |
N |
HN1 |
180.0 |
180.0 |
| CB |
CA |
N |
HN2 |
54.7 |
293.8 |
| N |
CA |
CB |
HA1 |
125.3 |
120.0 |
| N |
CA |
CB |
HA2 |
234.7 |
240.0 |
| HA1 |
CA |
CB |
HA2 |
109.5 |
120.0 |
| CG |
CB |
CA |
HB1 |
234.7 |
239.9 |
| CG |
CB |
CA |
HB2 |
125.3 |
120.0 |
| CA |
CB |
CG |
CD |
179.1 |
180.0 |
| CA |
CB |
CG |
HG1 |
304.3 |
300.0 |
| CA |
CB |
CG |
HG2 |
53.9 |
60.0 |
| HB1 |
CB |
CA |
HB2 |
250.6 |
240.0 |
| HA1 |
CA |
N |
HN1 |
305.3 |
300.1 |
| HA1 |
CA |
N |
HN2 |
180.0 |
53.9 |
| N |
CA |
HA1 |
CB |
235.5 |
239.9 |
| N |
CA |
HA1 |
HA2 |
117.8 |
119.9 |
| CB |
CA |
HA1 |
HA2 |
242.3 |
240.0 |
| HA1 |
CA |
CB |
CG |
47.2 |
59.9 |
| HA1 |
CA |
CB |
HB1 |
172.5 |
180.0 |
| HA1 |
CA |
CB |
HB2 |
282.0 |
300.0 |
| HA2 |
CA |
N |
HN1 |
54.8 |
60.0 |
| HA2 |
CA |
N |
HN2 |
289.5 |
173.8 |
| N |
CA |
HA2 |
CB |
124.5 |
120.1 |
| N |
CA |
HA2 |
HA1 |
242.2 |
240.1 |
| CB |
CA |
HA2 |
HA1 |
117.7 |
120.0 |
| HA2 |
CA |
CB |
CG |
297.8 |
300.0 |
| HA2 |
CA |
CB |
HB1 |
63.1 |
60.0 |
| HA2 |
CA |
CB |
HB2 |
172.5 |
180.0 |
| CG |
CB |
CA |
HA1 |
47.2 |
59.9 |
| CG |
CB |
CA |
HA2 |
297.8 |
300.0 |
| CA |
CB |
CG |
HB1 |
125.3 |
120.1 |
| CA |
CB |
CG |
HB2 |
234.7 |
240.0 |
| HB1 |
CB |
CG |
HB2 |
109.4 |
119.9 |
| CD |
CG |
CB |
HG1 |
234.8 |
240.0 |
| CD |
CG |
CB |
HG2 |
125.2 |
120.0 |
| CB |
CG |
CD |
NE |
53.8 |
180.1 |
| CB |
CG |
CD |
HD1 |
179.1 |
300.0 |
| CB |
CG |
CD |
HD2 |
288.6 |
60.0 |
| HG1 |
CG |
CB |
HG2 |
250.4 |
240.0 |
| HB1 |
CB |
CA |
HA1 |
172.5 |
180.0 |
| HB1 |
CB |
CA |
HA2 |
63.1 |
60.0 |
| CA |
CB |
HB1 |
CG |
232.5 |
239.9 |
| CA |
CB |
HB1 |
HB2 |
116.3 |
120.0 |
| CG |
CB |
HB1 |
HB2 |
243.8 |
240.1 |
| HB1 |
CB |
CG |
CD |
53.8 |
59.9 |
| HB1 |
CB |
CG |
HG1 |
179.1 |
179.9 |
| HB1 |
CB |
CG |
HG2 |
288.6 |
299.9 |
| HB2 |
CB |
CA |
HA1 |
282.0 |
300.0 |
| HB2 |
CB |
CA |
HA2 |
172.5 |
180.0 |
| CA |
CB |
HB2 |
CG |
127.5 |
120.1 |
| CA |
CB |
HB2 |
HB1 |
243.8 |
240.0 |
| CG |
CB |
HB2 |
HB1 |
116.2 |
119.9 |
| HB2 |
CB |
CG |
CD |
304.4 |
300.0 |
| HB2 |
CB |
CG |
HG1 |
69.6 |
60.0 |
| HB2 |
CB |
CG |
HG2 |
179.2 |
180.0 |
| CD |
CG |
CB |
HB1 |
53.8 |
59.9 |
| CD |
CG |
CB |
HB2 |
304.4 |
300.0 |
| CB |
CG |
CD |
HG1 |
125.2 |
120.0 |
| CB |
CG |
CD |
HG2 |
234.7 |
240.0 |
| HG1 |
CG |
CD |
HG2 |
109.5 |
120.0 |
| NE |
CD |
CG |
HD1 |
234.8 |
240.0 |
| NE |
CD |
CG |
HD2 |
125.3 |
120.1 |
| CG |
CD |
NE |
CZ |
100.9 |
180.0 |
| CG |
CD |
NE |
HE1 |
335.6 |
360.0 |
| HD1 |
CD |
CG |
HD2 |
250.5 |
240.0 |
| HG1 |
CG |
CB |
HB1 |
179.1 |
179.9 |
| HG1 |
CG |
CB |
HB2 |
69.6 |
60.0 |
| CB |
CG |
HG1 |
CD |
235.1 |
239.9 |
| CB |
CG |
HG1 |
HG2 |
117.6 |
120.0 |
| CD |
CG |
HG1 |
HG2 |
242.5 |
240.0 |
| HG1 |
CG |
CD |
NE |
288.6 |
60.0 |
| HG1 |
CG |
CD |
HD1 |
53.8 |
180.0 |
| HG1 |
CG |
CD |
HD2 |
163.3 |
299.9 |
| HG2 |
CG |
CB |
HB1 |
288.6 |
299.9 |
| HG2 |
CG |
CB |
HB2 |
179.2 |
180.0 |
| CB |
CG |
HG2 |
CD |
125.0 |
120.0 |
| CB |
CG |
HG2 |
HG1 |
242.4 |
240.0 |
| CD |
CG |
HG2 |
HG1 |
117.5 |
120.0 |
| HG2 |
CG |
CD |
NE |
179.1 |
300.1 |
| HG2 |
CG |
CD |
HD1 |
304.4 |
60.0 |
| HG2 |
CG |
CD |
HD2 |
53.9 |
180.0 |
| NE |
CD |
CG |
HG1 |
288.6 |
60.0 |
| NE |
CD |
CG |
HG2 |
179.1 |
300.1 |
| CG |
CD |
NE |
HD1 |
125.3 |
120.0 |
| CG |
CD |
NE |
HD2 |
234.7 |
240.0 |
| HD1 |
CD |
NE |
HD2 |
109.5 |
120.0 |
| CZ |
NE |
CD |
HE1 |
125.3 |
180.0 |
| CD |
NE |
CZ |
NH1 |
0.1 |
360.0 |
| CD |
NE |
CZ |
NH2 |
179.5 |
180.0 |
| HD1 |
CD |
CG |
HG1 |
53.8 |
180.0 |
| HD1 |
CD |
CG |
HG2 |
304.4 |
60.0 |
| CG |
CD |
HD1 |
NE |
234.4 |
240.0 |
| CG |
CD |
HD1 |
HD2 |
117.2 |
120.0 |
| NE |
CD |
HD1 |
HD2 |
242.8 |
240.0 |
| HD1 |
CD |
NE |
CZ |
335.6 |
60.1 |
| HD1 |
CD |
NE |
HE1 |
210.3 |
240.0 |
| HD2 |
CD |
CG |
HG1 |
163.3 |
299.9 |
| HD2 |
CD |
CG |
HG2 |
53.9 |
180.0 |
| CG |
CD |
HD2 |
NE |
125.6 |
120.1 |
| CG |
CD |
HD2 |
HD1 |
242.8 |
240.0 |
| NE |
CD |
HD2 |
HD1 |
117.2 |
120.0 |
| HD2 |
CD |
NE |
CZ |
226.1 |
300.1 |
| HD2 |
CD |
NE |
HE1 |
100.8 |
120.0 |
| CZ |
NE |
CD |
HD1 |
335.6 |
60.1 |
| CZ |
NE |
CD |
HD2 |
226.1 |
300.1 |
| CD |
NE |
CZ |
HE1 |
234.7 |
180.0 |
| NH1 |
CZ |
NE |
NH2 |
180.6 |
180.0 |
| NE |
CZ |
NH1 |
HH11 |
130.7 |
180.0 |
| NE |
CZ |
NH2 |
HH21 |
180.1 |
180.0 |
| NE |
CZ |
NH2 |
HH22 |
54.7 |
360.0 |
| HE1 |
NE |
CD |
HD1 |
210.3 |
240.0 |
| HE1 |
NE |
CD |
HD2 |
100.8 |
120.0 |
| CD |
NE |
HE1 |
CZ |
135.3 |
180.0 |
| HE1 |
NE |
CZ |
NH1 |
125.5 |
180.0 |
| HE1 |
NE |
CZ |
NH2 |
304.9 |
0.0 |
| NH1 |
CZ |
NE |
HE1 |
125.5 |
180.0 |
| NE |
CZ |
NH1 |
NH2 |
179.4 |
180.0 |
| NH1 |
CZ |
NH2 |
HH21 |
359.5 |
360.0 |
| NH1 |
CZ |
NH2 |
HH22 |
234.1 |
180.0 |
| NH2 |
CZ |
NE |
HE1 |
304.9 |
0.0 |
| NE |
CZ |
NH2 |
NH1 |
180.6 |
180.0 |
| NH2 |
CZ |
NH1 |
HH11 |
311.3 |
0.0 |
| HH21 |
NH2 |
CZ |
HH22 |
125.4 |
180.0 |
| HH11 |
NH1 |
CZ |
NH2 |
311.3 |
0.0 |
| CZ |
NH2 |
HH21 |
HH22 |
234.6 |
180.0 |
| CZ |
NH2 |
HH22 |
HH21 |
131.8 |
180.0 |