PDB Chemical Component 4MV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 4MV
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA |
CB |
1.520 |
1.528 |
| CA |
C |
1.516 |
1.507 |
| CA |
HA1 |
1.116 |
1.090 |
| CA |
HA2 |
1.115 |
1.089 |
| CB |
CG |
1.530 |
1.530 |
| CB |
HB1 |
1.116 |
1.090 |
| CB |
HB2 |
1.115 |
1.090 |
| CG |
CD1 |
1.524 |
1.530 |
| CG |
CD2 |
1.517 |
1.529 |
| CG |
HG |
1.114 |
1.089 |
| CD1 |
HD11 |
1.114 |
1.090 |
| CD1 |
HD12 |
1.115 |
1.090 |
| CD1 |
HD13 |
1.116 |
1.089 |
| CD2 |
HD21 |
1.114 |
1.091 |
| CD2 |
HD22 |
1.115 |
1.090 |
| CD2 |
HD23 |
1.115 |
1.090 |
| C |
O |
1.244 |
1.208 |
| C |
OXT |
1.247 |
1.342 |
| OXT |
HXT |
0.949 |
0.967 |
Bond Angles for 4MV
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
C |
113.0 |
109.5 |
| CB |
CA |
HA1 |
110.9 |
109.5 |
| CB |
CA |
HA2 |
110.9 |
109.5 |
| CA |
CB |
CG |
115.0 |
109.5 |
| CA |
CB |
HB1 |
110.2 |
109.5 |
| CA |
CB |
HB2 |
110.2 |
109.5 |
| C |
CA |
HA1 |
110.9 |
109.4 |
| C |
CA |
HA2 |
110.9 |
109.5 |
| CA |
C |
O |
117.7 |
120.0 |
| CA |
C |
OXT |
119.7 |
120.1 |
| HA1 |
CA |
HA2 |
99.4 |
109.4 |
| CG |
CB |
HB1 |
110.2 |
109.4 |
| CG |
CB |
HB2 |
110.2 |
109.4 |
| CB |
CG |
CD1 |
110.8 |
109.5 |
| CB |
CG |
CD2 |
108.7 |
109.5 |
| CB |
CG |
HG |
109.3 |
109.4 |
| HB1 |
CB |
HB2 |
100.0 |
109.4 |
| CD1 |
CG |
CD2 |
110.0 |
109.5 |
| CD1 |
CG |
HG |
107.9 |
109.5 |
| CG |
CD1 |
HD11 |
110.8 |
109.5 |
| CG |
CD1 |
HD12 |
111.7 |
109.5 |
| CG |
CD1 |
HD13 |
111.7 |
109.5 |
| CD2 |
CG |
HG |
110.1 |
109.5 |
| CG |
CD2 |
HD21 |
108.7 |
109.4 |
| CG |
CD2 |
HD22 |
112.5 |
109.5 |
| CG |
CD2 |
HD23 |
112.5 |
109.5 |
| HD11 |
CD1 |
HD12 |
111.8 |
109.4 |
| HD11 |
CD1 |
HD13 |
111.7 |
109.5 |
| HD12 |
CD1 |
HD13 |
98.6 |
109.4 |
| HD21 |
CD2 |
HD22 |
112.5 |
109.4 |
| HD21 |
CD2 |
HD23 |
112.6 |
109.5 |
| HD22 |
CD2 |
HD23 |
97.9 |
109.6 |
| O |
C |
OXT |
122.6 |
120.0 |
| C |
OXT |
HXT |
119.7 |
120.1 |
Torsion Angles for 4MV
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
HA1 |
234.7 |
240.0 |
| C |
CA |
CB |
HA2 |
125.3 |
120.0 |
| CB |
CA |
C |
O |
230.9 |
0.0 |
| CB |
CA |
C |
OXT |
51.2 |
180.0 |
| HA1 |
CA |
CB |
HA2 |
250.6 |
240.0 |
| CG |
CB |
CA |
HB1 |
234.7 |
120.0 |
| CG |
CB |
CA |
HB2 |
125.3 |
240.0 |
| CA |
CB |
CG |
CD1 |
71.6 |
180.0 |
| CA |
CB |
CG |
CD2 |
192.6 |
300.0 |
| CA |
CB |
CG |
HG |
312.8 |
60.0 |
| HB1 |
CB |
CA |
HB2 |
250.6 |
120.0 |
| CB |
CA |
C |
HA1 |
125.3 |
120.0 |
| CB |
CA |
C |
HA2 |
234.7 |
240.0 |
| C |
CA |
CB |
CG |
56.1 |
180.0 |
| C |
CA |
CB |
HB1 |
181.4 |
60.0 |
| C |
CA |
CB |
HB2 |
290.8 |
300.0 |
| HA1 |
CA |
C |
HA2 |
109.5 |
119.9 |
| O |
C |
CA |
OXT |
179.7 |
180.0 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| CB |
CA |
HA1 |
C |
233.5 |
240.0 |
| CB |
CA |
HA1 |
HA2 |
116.7 |
120.0 |
| HA1 |
CA |
CB |
CG |
181.4 |
300.0 |
| HA1 |
CA |
CB |
HB1 |
306.7 |
180.0 |
| HA1 |
CA |
CB |
HB2 |
56.1 |
60.0 |
| C |
CA |
HA1 |
HA2 |
243.2 |
240.1 |
| HA1 |
CA |
C |
O |
105.7 |
240.0 |
| HA1 |
CA |
C |
OXT |
285.9 |
60.0 |
| CB |
CA |
HA2 |
C |
126.5 |
120.1 |
| CB |
CA |
HA2 |
HA1 |
243.3 |
240.0 |
| HA2 |
CA |
CB |
CG |
290.8 |
60.0 |
| HA2 |
CA |
CB |
HB1 |
56.1 |
299.9 |
| HA2 |
CA |
CB |
HB2 |
165.5 |
180.0 |
| C |
CA |
HA2 |
HA1 |
116.8 |
119.9 |
| HA2 |
CA |
C |
O |
356.2 |
120.1 |
| HA2 |
CA |
C |
OXT |
176.5 |
300.1 |
| CG |
CB |
CA |
C |
56.1 |
180.0 |
| CG |
CB |
CA |
HA1 |
181.4 |
300.0 |
| CG |
CB |
CA |
HA2 |
290.8 |
60.0 |
| CA |
CB |
CG |
HB1 |
125.3 |
239.9 |
| CA |
CB |
CG |
HB2 |
234.7 |
120.0 |
| HB1 |
CB |
CG |
HB2 |
109.4 |
240.1 |
| CD1 |
CG |
CB |
CD2 |
239.0 |
240.0 |
| CD1 |
CG |
CB |
HG |
118.8 |
120.0 |
| CB |
CG |
CD1 |
HD11 |
180.0 |
180.0 |
| CB |
CG |
CD1 |
HD12 |
305.3 |
300.0 |
| CB |
CG |
CD1 |
HD13 |
54.7 |
59.9 |
| CD2 |
CG |
CB |
HG |
239.8 |
240.1 |
| CB |
CG |
CD2 |
HD21 |
180.1 |
300.0 |
| CB |
CG |
CD2 |
HD22 |
305.3 |
59.9 |
| CB |
CG |
CD2 |
HD23 |
54.7 |
180.0 |
| HB1 |
CB |
CA |
C |
181.4 |
60.0 |
| HB1 |
CB |
CA |
HA1 |
306.7 |
180.0 |
| HB1 |
CB |
CA |
HA2 |
56.1 |
299.9 |
| CA |
CB |
HB1 |
CG |
232.0 |
120.1 |
| CA |
CB |
HB1 |
HB2 |
116.0 |
240.0 |
| CG |
CB |
HB1 |
HB2 |
244.0 |
119.9 |
| HB1 |
CB |
CG |
CD1 |
306.4 |
300.1 |
| HB1 |
CB |
CG |
CD2 |
67.4 |
60.1 |
| HB1 |
CB |
CG |
HG |
187.6 |
180.1 |
| HB2 |
CB |
CA |
C |
290.8 |
300.0 |
| HB2 |
CB |
CA |
HA1 |
56.1 |
60.0 |
| HB2 |
CB |
CA |
HA2 |
165.5 |
180.0 |
| CA |
CB |
HB2 |
CG |
128.0 |
240.0 |
| CA |
CB |
HB2 |
HB1 |
244.0 |
120.0 |
| CG |
CB |
HB2 |
HB1 |
116.0 |
240.1 |
| HB2 |
CB |
CG |
CD1 |
197.0 |
60.0 |
| HB2 |
CB |
CG |
CD2 |
318.0 |
180.0 |
| HB2 |
CB |
CG |
HG |
78.2 |
300.0 |
| CD1 |
CG |
CB |
HB1 |
306.4 |
300.1 |
| CD1 |
CG |
CB |
HB2 |
197.0 |
60.0 |
| CB |
CG |
CD1 |
CD2 |
120.2 |
120.0 |
| CB |
CG |
CD1 |
HG |
240.4 |
240.0 |
| CD2 |
CG |
CD1 |
HG |
120.2 |
120.0 |
| CD1 |
CG |
CD2 |
HD21 |
301.5 |
60.0 |
| CD1 |
CG |
CD2 |
HD22 |
66.7 |
179.9 |
| CD1 |
CG |
CD2 |
HD23 |
176.2 |
300.0 |
| HD11 |
CD1 |
CG |
HD12 |
234.7 |
240.1 |
| HD11 |
CD1 |
CG |
HD13 |
125.2 |
120.1 |
| HD12 |
CD1 |
CG |
HD13 |
250.6 |
240.1 |
| CD2 |
CG |
CB |
HB1 |
67.4 |
60.1 |
| CD2 |
CG |
CB |
HB2 |
318.0 |
180.0 |
| CB |
CG |
CD2 |
CD1 |
238.5 |
240.0 |
| CB |
CG |
CD2 |
HG |
119.7 |
119.9 |
| CD1 |
CG |
CD2 |
HG |
241.1 |
240.0 |
| CD2 |
CG |
CD1 |
HD11 |
59.8 |
60.0 |
| CD2 |
CG |
CD1 |
HD12 |
185.1 |
180.0 |
| CD2 |
CG |
CD1 |
HD13 |
294.5 |
299.9 |
| HD21 |
CD2 |
CG |
HD22 |
234.8 |
240.1 |
| HD21 |
CD2 |
CG |
HD23 |
125.4 |
120.0 |
| HD22 |
CD2 |
CG |
HD23 |
250.6 |
239.9 |
| HG |
CG |
CB |
HB1 |
187.6 |
180.1 |
| HG |
CG |
CB |
HB2 |
78.2 |
300.0 |
| CB |
CG |
HG |
CD1 |
120.6 |
120.0 |
| CB |
CG |
HG |
CD2 |
240.7 |
240.0 |
| CD1 |
CG |
HG |
CD2 |
120.1 |
120.0 |
| HG |
CG |
CD1 |
HD11 |
299.6 |
300.0 |
| HG |
CG |
CD1 |
HD12 |
64.9 |
60.0 |
| HG |
CG |
CD1 |
HD13 |
174.4 |
179.9 |
| HG |
CG |
CD2 |
HD21 |
60.4 |
180.0 |
| HG |
CG |
CD2 |
HD22 |
185.6 |
300.0 |
| HG |
CG |
CD2 |
HD23 |
295.0 |
60.1 |
| HD11 |
CD1 |
CG |
CD2 |
59.8 |
60.0 |
| HD11 |
CD1 |
CG |
HG |
299.6 |
300.0 |
| CG |
CD1 |
HD11 |
HD12 |
125.3 |
120.0 |
| CG |
CD1 |
HD11 |
HD13 |
234.7 |
239.9 |
| HD12 |
CD1 |
HD11 |
HD13 |
109.4 |
120.0 |
| HD12 |
CD1 |
CG |
CD2 |
185.1 |
180.0 |
| HD12 |
CD1 |
CG |
HG |
64.9 |
60.0 |
| CG |
CD1 |
HD12 |
HD11 |
235.2 |
240.0 |
| CG |
CD1 |
HD12 |
HD13 |
117.6 |
120.0 |
| HD11 |
CD1 |
HD12 |
HD13 |
242.4 |
240.0 |
| HD13 |
CD1 |
CG |
CD2 |
294.5 |
299.9 |
| HD13 |
CD1 |
CG |
HG |
174.4 |
179.9 |
| CG |
CD1 |
HD13 |
HD11 |
124.8 |
120.1 |
| CG |
CD1 |
HD13 |
HD12 |
242.4 |
240.0 |
| HD11 |
CD1 |
HD13 |
HD12 |
117.6 |
120.0 |
| HD21 |
CD2 |
CG |
HG |
60.4 |
180.0 |
| CG |
CD2 |
HD21 |
HD22 |
125.2 |
119.9 |
| CG |
CD2 |
HD21 |
HD23 |
234.6 |
240.0 |
| HD22 |
CD2 |
HD21 |
HD23 |
109.4 |
120.1 |
| HD22 |
CD2 |
CG |
HG |
185.6 |
300.0 |
| CG |
CD2 |
HD22 |
HD21 |
236.9 |
240.1 |
| CG |
CD2 |
HD22 |
HD23 |
118.4 |
120.0 |
| HD21 |
CD2 |
HD22 |
HD23 |
241.5 |
240.0 |
| HD23 |
CD2 |
CG |
HG |
295.0 |
60.1 |
| CG |
CD2 |
HD23 |
HD21 |
123.2 |
119.9 |
| CG |
CD2 |
HD23 |
HD22 |
241.6 |
240.0 |
| HD21 |
CD2 |
HD23 |
HD22 |
118.4 |
120.0 |
| O |
C |
CA |
HA1 |
105.7 |
240.0 |
| O |
C |
CA |
HA2 |
356.2 |
120.1 |
| CA |
C |
O |
OXT |
180.3 |
180.0 |
| O |
C |
OXT |
HXT |
0.3 |
0.0 |
| OXT |
C |
CA |
HA1 |
285.9 |
60.0 |
| OXT |
C |
CA |
HA2 |
176.5 |
300.1 |
| CA |
C |
OXT |
O |
179.7 |
180.0 |