PDB Chemical Component 3NT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 3NT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.395 |
1.382 |
C1 |
C6 |
1.395 |
1.383 |
C1 |
C7 |
1.506 |
1.507 |
C2 |
C3 |
1.396 |
1.383 |
C2 |
H2 |
1.103 |
1.080 |
C3 |
C4 |
1.400 |
1.382 |
C3 |
N3 |
1.360 |
1.480 |
C4 |
C5 |
1.397 |
1.383 |
C4 |
H4 |
1.103 |
1.080 |
C5 |
C6 |
1.397 |
1.383 |
C5 |
H5 |
1.103 |
1.079 |
C6 |
H6 |
1.103 |
1.080 |
C7 |
H7C1 |
1.114 |
1.090 |
C7 |
H7C2 |
1.115 |
1.090 |
C7 |
H7C3 |
1.115 |
1.090 |
N3 |
O1N |
1.248 |
1.218 |
N3 |
O2N |
1.247 |
1.218 |
Bond Angles for 3NT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.2 |
120.0 |
C2 |
C1 |
C7 |
119.7 |
120.0 |
C1 |
C2 |
C3 |
120.2 |
120.0 |
C1 |
C2 |
H2 |
119.9 |
120.1 |
C6 |
C1 |
C7 |
120.1 |
120.0 |
C1 |
C6 |
C5 |
119.8 |
120.0 |
C1 |
C6 |
H6 |
120.1 |
120.0 |
C1 |
C7 |
H7C1 |
119.7 |
109.4 |
C1 |
C7 |
H7C2 |
108.5 |
109.5 |
C1 |
C7 |
H7C3 |
108.6 |
109.4 |
C3 |
C2 |
H2 |
119.9 |
119.9 |
C2 |
C3 |
C4 |
119.6 |
120.0 |
C2 |
C3 |
N3 |
118.3 |
120.0 |
C4 |
C3 |
N3 |
122.1 |
120.0 |
C3 |
C4 |
C5 |
120.3 |
120.0 |
C3 |
C4 |
H4 |
119.9 |
120.0 |
C3 |
N3 |
O1N |
118.6 |
120.0 |
C3 |
N3 |
O2N |
122.2 |
120.0 |
C5 |
C4 |
H4 |
119.9 |
120.0 |
C4 |
C5 |
C6 |
119.9 |
120.0 |
C4 |
C5 |
H5 |
120.0 |
120.0 |
C6 |
C5 |
H5 |
120.1 |
120.0 |
C5 |
C6 |
H6 |
120.1 |
120.0 |
H7C1 |
C7 |
H7C2 |
108.5 |
109.5 |
H7C1 |
C7 |
H7C3 |
108.5 |
109.5 |
H7C2 |
C7 |
H7C3 |
101.5 |
109.5 |
O1N |
N3 |
O2N |
119.2 |
120.0 |
Torsion Angles for 3NT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C7 |
180.4 |
179.7 |
C2 |
C1 |
C6 |
C5 |
359.8 |
0.3 |
C2 |
C1 |
C6 |
H6 |
179.8 |
180.2 |
C2 |
C1 |
C7 |
H7C1 |
180.0 |
269.7 |
C2 |
C1 |
C7 |
H7C2 |
54.7 |
29.7 |
C2 |
C1 |
C7 |
H7C3 |
305.2 |
149.8 |
C3 |
C2 |
C1 |
H2 |
180.0 |
179.6 |
C1 |
C2 |
C3 |
C4 |
0.0 |
0.4 |
C1 |
C2 |
C3 |
N3 |
179.7 |
180.2 |
C2 |
C1 |
C6 |
C7 |
179.6 |
180.3 |
C6 |
C1 |
C2 |
C3 |
0.1 |
359.5 |
C6 |
C1 |
C2 |
H2 |
180.1 |
180.0 |
C6 |
C1 |
C7 |
H7C1 |
359.6 |
90.0 |
C6 |
C1 |
C7 |
H7C2 |
234.3 |
210.0 |
C6 |
C1 |
C7 |
H7C3 |
124.9 |
330.0 |
C4 |
C5 |
C6 |
C1 |
0.2 |
360.0 |
C1 |
C6 |
C5 |
H5 |
180.2 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
C7 |
C6 |
180.4 |
179.7 |
C7 |
C1 |
C2 |
C3 |
179.7 |
179.8 |
C7 |
C1 |
C2 |
H2 |
359.7 |
0.2 |
C7 |
C1 |
C6 |
C5 |
180.2 |
180.0 |
C7 |
C1 |
C6 |
H6 |
0.2 |
360.0 |
H7C1 |
C7 |
C1 |
H7C2 |
125.2 |
240.0 |
H7C1 |
C7 |
C1 |
H7C3 |
234.7 |
120.0 |
H7C2 |
C7 |
C1 |
H7C3 |
109.5 |
240.0 |
C3 |
C2 |
C1 |
C6 |
0.1 |
359.5 |
C3 |
C2 |
C1 |
C7 |
179.7 |
179.8 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.4 |
C4 |
C3 |
C2 |
N3 |
180.4 |
180.2 |
C2 |
C3 |
C4 |
C5 |
360.0 |
359.8 |
C2 |
C3 |
C4 |
H4 |
180.0 |
179.9 |
C2 |
C3 |
N3 |
O1N |
341.4 |
180.1 |
C2 |
C3 |
N3 |
O2N |
160.8 |
0.2 |
H2 |
C2 |
C1 |
C6 |
180.1 |
180.0 |
H2 |
C2 |
C1 |
C7 |
359.7 |
0.2 |
C1 |
C2 |
H2 |
C3 |
180.0 |
179.6 |
H2 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
N3 |
359.7 |
359.8 |
C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
N3 |
179.6 |
179.8 |
C4 |
C3 |
N3 |
O1N |
161.0 |
359.9 |
C4 |
C3 |
N3 |
O2N |
340.4 |
180.0 |
C5 |
C4 |
C3 |
H4 |
180.0 |
179.9 |
C3 |
C4 |
C5 |
C6 |
359.9 |
-0.0 |
C3 |
C4 |
C5 |
H5 |
179.9 |
180.0 |
N3 |
C3 |
C2 |
H2 |
359.7 |
359.8 |
C2 |
C3 |
N3 |
C4 |
180.4 |
180.2 |
N3 |
C3 |
C4 |
C5 |
180.3 |
180.0 |
N3 |
C3 |
C4 |
H4 |
0.3 |
0.1 |
O1N |
N3 |
C3 |
O2N |
180.6 |
179.9 |
C1 |
C6 |
C5 |
C4 |
0.2 |
360.0 |
C5 |
C4 |
C3 |
N3 |
180.3 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H6 |
180.2 |
180.0 |
H4 |
C4 |
C3 |
N3 |
0.3 |
0.1 |
C3 |
C4 |
H4 |
C5 |
180.0 |
179.9 |
H4 |
C4 |
C5 |
C6 |
179.9 |
179.9 |
H4 |
C4 |
C5 |
H5 |
359.9 |
359.9 |
C5 |
C6 |
C1 |
C7 |
180.2 |
180.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.9 |
179.9 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
H5 |
C5 |
C4 |
H4 |
359.9 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
H6 |
0.2 |
-0.0 |
H6 |
C6 |
C1 |
C7 |
0.2 |
360.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
0.2 |
-0.0 |
C1 |
C7 |
H7C1 |
H7C2 |
234.8 |
120.0 |
C1 |
C7 |
H7C1 |
H7C3 |
125.3 |
240.0 |
H7C2 |
C7 |
H7C1 |
H7C3 |
250.5 |
120.0 |
C1 |
C7 |
H7C2 |
H7C1 |
131.6 |
240.0 |
C1 |
C7 |
H7C2 |
H7C3 |
245.8 |
120.0 |
H7C1 |
C7 |
H7C2 |
H7C3 |
114.2 |
240.0 |
C1 |
C7 |
H7C3 |
H7C1 |
228.4 |
120.0 |
C1 |
C7 |
H7C3 |
H7C2 |
114.2 |
240.0 |
H7C1 |
C7 |
H7C3 |
H7C2 |
245.8 |
120.0 |
C3 |
N3 |
O1N |
O2N |
179.5 |
180.1 |
C3 |
N3 |
O2N |
O1N |
180.6 |
179.9 |