PDB Chemical Component 13P

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 13P

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
P O1P 1.596 1.480
P O2P 1.580 1.610
P O3P 1.557 1.609
P O1 1.607 1.609
O2P HOP2 1.002 0.967
O3P HOP3 0.950 0.968
O1 C1 1.426 1.427
C1 C2 1.507 1.507
C1 H11 1.114 1.090
C1 H12 1.115 1.090
C2 O2 1.231 1.207
C2 C3 1.517 1.506
C3 O3 1.416 1.430
C3 H31 1.115 1.090
C3 H32 1.115 1.090
O3 HO3 0.965 0.967

Bond Angles for 13P

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1P P O2P 106.6 109.4
O1P P O3P 108.7 109.4
O1P P O1 108.5 109.4
O2P P O3P 109.2 109.5
O2P P O1 112.8 109.5
P O2P HOP2 105.5 106.8
O3P P O1 110.8 109.5
P O3P HOP3 108.8 106.7
P O1 C1 118.7 106.8
O1 C1 C2 106.1 109.5
O1 C1 H11 113.5 109.5
O1 C1 H12 113.5 109.5
C2 C1 H11 113.5 109.5
C2 C1 H12 113.5 109.4
C1 C2 O2 119.9 119.9
C1 C2 C3 119.9 120.1
H11 C1 H12 97.0 109.4
O2 C2 C3 120.1 120.0
C2 C3 O3 108.9 109.5
C2 C3 H31 112.4 109.5
C2 C3 H32 112.5 109.5
O3 C3 H31 112.4 109.5
O3 C3 H32 112.4 109.4
C3 O3 HO3 111.4 106.8
H31 C3 H32 97.9 109.4

Torsion Angles for 13P

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2P P O1P O3P 117.7 120.0
O2P P O1P O1 238.2 240.0
O1P P O2P HOP2 283.4 300.0
O3P P O1P O1 120.6 120.0
O1P P O3P HOP3 180.0 180.0
O1P P O1 C1 150.9 60.1
O1P P O2P O3P 242.7 240.0
O1P P O2P O1 119.0 119.9
O3P P O2P O1 236.3 239.9
O2P P O3P HOP3 64.0 60.0
O2P P O1 C1 268.8 180.0
O1P P O3P O2P 116.0 119.9
O1P P O3P O1 240.9 240.0
O2P P O3P O1 124.9 120.1
O3P P O2P HOP2 40.7 59.9
O3P P O1 C1 31.6 300.1
O1P P O1 O2P 242.1 240.1
O1P P O1 O3P 119.3 120.0
O2P P O1 O3P 237.1 239.9
O1 P O2P HOP2 164.4 180.0
O1 P O3P HOP3 299.1 299.9
P O1 C1 C2 107.0 180.0
P O1 C1 H11 232.2 59.9
P O1 C1 H12 341.7 300.0
HOP2 O2P P O3P 40.7 59.9
HOP2 O2P P O1 164.4 180.0
HOP3 O3P P O1 299.1 299.9
C2 C1 O1 H11 234.7 120.1
C2 C1 O1 H12 125.2 240.0
O1 C1 C2 O2 106.0 359.9
O1 C1 C2 C3 285.3 180.0
H11 C1 O1 H12 250.5 119.9
O1 C1 C2 H11 125.3 239.9
O1 C1 C2 H12 234.8 120.0
H11 C1 C2 H12 109.5 240.1
O2 C2 C1 C3 180.7 179.9
C1 C2 C3 O3 177.6 180.0
C1 C2 C3 H31 302.8 59.9
C1 C2 C3 H32 52.3 299.9
O1 C1 H11 C2 238.8 120.1
O1 C1 H11 H12 119.4 240.0
C2 C1 H11 H12 240.6 119.9
H11 C1 C2 O2 340.7 120.0
H11 C1 C2 C3 160.1 300.1
O1 C1 H12 C2 121.2 240.0
O1 C1 H12 H11 240.6 120.0
C2 C1 H12 H11 119.4 240.1
H12 C1 C2 O2 231.2 239.9
H12 C1 C2 C3 50.6 60.0
O2 C2 C1 H11 340.7 120.0
O2 C2 C1 H12 231.2 239.9
C1 C2 O2 C3 179.3 180.1
O2 C2 C3 O3 356.9 0.1
O2 C2 C3 H31 122.2 240.0
O2 C2 C3 H32 231.6 120.0
C3 C2 C1 H11 160.1 300.1
C3 C2 C1 H12 50.6 60.0
C1 C2 C3 O2 180.7 179.9
O3 C3 C2 H31 234.7 120.0
O3 C3 C2 H32 125.3 240.0
C2 C3 O3 HO3 96.5 180.0
H31 C3 C2 H32 250.6 120.0
C2 C3 O3 H31 125.3 239.9
C2 C3 O3 H32 234.7 120.0
H31 C3 O3 H32 109.4 240.1
C2 C3 H31 O3 236.7 120.1
C2 C3 H31 H32 118.4 240.0
O3 C3 H31 H32 241.7 119.9
H31 C3 O3 HO3 331.2 300.1
C2 C3 H32 O3 123.4 240.0
C2 C3 H32 H31 241.7 120.1
O3 C3 H32 H31 118.3 240.1
H32 C3 O3 HO3 221.8 60.0
HO3 O3 C3 H31 331.2 300.1
HO3 O3 C3 H32 221.8 60.0